Erich D. Jarvis

Genomic signatures of near-extinction and rebirth of the crested ibis and other endangered bird species.

Evaluating functional network inference using simulations of complex biological systems.

Induction of hippocampal long-term potentiation during waking leads to increased extrahippocampal zif-268 expression during ensuing rapid-eye-movement sleep.

Influence of network topology and data collection on network inference.

Analysis of the mouse transcriptome for genes involved in the function of the nervous system.

Revised nomenclature for avian telencephalon and some related brainstem nuclei.

Differential expression of glutamate receptors in avian neural pathways for learned vocalization.

Advances to Bayesian network inference for generating causal networks from observational biological data.

Songbirds and the revised avian brain nomenclature.

Learned birdsong and the neurobiology of human language.

Avian brains and a new understanding of vertebrate brain evolution.

Night-vision brain area in migratory songbirds.

Rapid behavioral and genomic responses to social opportunity.

Social context-dependent singing-regulated dopamine.

A molecular neuroethological approach for identifying and characterizing a cascade of behaviorally regulated genes.

Computational inference of neural information flow networks.

Lateralized activation of Cluster N in the brains of migratory songbirds.

The pallial basal ganglia pathway modulates the behaviorally driven gene expression of the motor pathway.

Role of the midbrain dopaminergic system in modulation of vocal brain activation by social context.

Molecular mapping of movement-associated areas in the avian brain: a motor theory for vocal learning origin.

Profiling of experience-regulated proteins in the songbird auditory forebrain using quantitative proteomics.

VOCALIZATIONS AND ASSOCIATED BEHAVIORS OF THE SOMBRE HUMMINGBIRD (APHANTOCHROA CIRRHOCHLORIS) AND THE RUFOUS-BREASTED HERMIT (GLAUCIS HIRSUTUS).

Assessing visual requirements for social context-dependent activation of the songbird song system.

Early onset of deafening-induced song deterioration and differential requirements of the pallial-basal ganglia vocal pathway.

The Avian Brain Nomenclature Forum: Terminology for a New Century in Comparative Neuroanatomy.

Neural systems for vocal learning in birds and humans: a synopsis.

Dopamine receptors in a songbird brain.

Comparative genomics based on massive parallel transcriptome sequencing reveals patterns of substitution and selection across 10 bird species.

The genome of a songbird.

The dusp1 immediate early gene is regulated by natural stimuli predominantly in sensory input neurons.

Obtaining mtDNA genomes from next-generation transcriptome sequencing: a case study on the basal Passerida (Aves: Passeriformes) phylogeny.

Night-time neuronal activation of Cluster N in a day- and night-migrating songbird.

Microproteomics: quantitative proteomic profiling of small numbers of laser-captured cells.

Dynamic evolution of base composition: causes and consequences in avian phylogenomics.

Convergent differential regulation of parvalbumin in the brains of vocal learners.

Dopamine regulation of human speech and bird song: A critical review.

Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes.

Hybrid error correction and de novo assembly of single-molecule sequencing reads.

Interspecies avian brain chimeras reveal that large brain size differences are influenced by cell-interdependent processes.

Specialized motor-driven dusp1 expression in the song systems of multiple lineages of vocal learning birds.

Birds, primates, and spoken language origins: behavioral phenotypes and neurobiological substrates.

Of mice, birds, and men: the mouse ultrasonic song system has some features similar to humans and song-learning birds.

Mouse vocal communication system: are ultrasounds learned or innate?

Global view of the functional molecular organization of the avian cerebrum: mirror images and functional columns.

Molecular profiling of the developing avian telencephalon: regional timing and brain subdivision continuities.

Rudimentary substrates for vocal learning in a suboscine.

Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species.

Different mechanisms are responsible for dishabituation of electrophysiological auditory responses to a change in acoustic identity than to a change in stimulus location.

Mammalian genes induce partially reprogrammed pluripotent stem cells in non-mammalian vertebrate and invertebrate species.

NSF workshop report: discovering general principles of nervous system organization by comparing brain maps across species.

NSF workshop report: discovering general principles of nervous system organization by comparing brain maps across species.

High-coverage sequencing and annotated assemblies of the budgerigar genome.

Basal ganglia function, stuttering, sequencing, and repair in adult songbirds.

Convergent differential regulation of SLIT-ROBO axon guidance genes in the brains of vocal learners.

Comparative genomics reveals molecular features unique to the songbird lineage.

Genomic resources for the endangered Hawaiian honeycreepers.

Dynamic evolution of the alpha (α) and beta (β) keratins has accompanied integument diversification and the adaptation of birds into novel lifestyles.

Low frequency of paleoviral infiltration across the avian phylogeny.

Evidence for GC-biased gene conversion as a driver of between-lineage differences in avian base composition.

Reconstruction of gross avian genome structure, organization and evolution suggests that the chicken lineage most closely resembles the dinosaur avian ancestor.

Avian genomes. A flock of genomes. Introduction.

Comparative genomics reveals insights into avian genome evolution and adaptation.

Whole-genome analyses resolve early branches in the tree of life of modern birds.

Complex evolutionary trajectories of sex chromosomes across bird taxa.

Evidence for a single loss of mineralized teeth in the common avian ancestor.

Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs.

Core and region-enriched networks of behaviorally regulated genes and the singing genome.

Convergent transcriptional specializations in the brains of humans and song-learning birds.

The basal ganglia within a cognitive system in birds and mammals.

Evolutionary genomics and adaptive evolution of the Hedgehog gene family (Shh, Ihh and Dhh) in vertebrates.

Maintenance and neuronal differentiation of chicken induced pluripotent stem-like cells.

Comparative genomic data of the Avian Phylogenomics Project.

Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment.

Phylogenomic analyses data of the avian phylogenomics project.

Male mice song syntax depends on social contexts and influences female preferences.

Genomics: Bird sequencing project takes off.

Core and Shell Song Systems Unique to the Parrot Brain.

A refined model of the genomic basis for phenotypic variation in vertebrate hemostasis.

Olfactory Receptor Subgenomes Linked with Broad Ecological Adaptations in Sauropsida.