Department of Cellular and Molecular Medicine,
Department of Medicine
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Transcriptional activation by NF-kappaB requires multiple coactivators.
Molecular and cellular biology Sep, 1999 | Pubmed ID: 10454583
Maternal hypercholesterolemia during pregnancy promotes early atherogenesis in LDL receptor-deficient mice and alters aortic gene expression determined by microarray.
Circulation Mar, 2002 | Pubmed ID: 11901049
An induced Ets repressor complex regulates growth arrest during terminal macrophage differentiation.
Cell Apr, 2002 | Pubmed ID: 12007404
Regulated subset of G1 growth-control genes in response to derepression by the Wnt pathway.
Proceedings of the National Academy of Sciences of the United States of America Mar, 2003 | Pubmed ID: 12629224
Promoter-specific roles for liver X receptor/corepressor complexes in the regulation of ABCA1 and SREBP1 gene expression.
Molecular and cellular biology Aug, 2003 | Pubmed ID: 12897148
A SUMOylation-dependent pathway mediates transrepression of inflammatory response genes by PPAR-gamma.
Nature Sep, 2005 | Pubmed ID: 16127449
Nuclear receptors versus inflammation: mechanisms of transrepression.
Trends in endocrinology and metabolism: TEM Oct, 2006 | Pubmed ID: 16942889
Evidence mandating earlier and more aggressive treatment of hypercholesterolemia.
Circulation Aug, 2008 | Pubmed ID: 18678783
Minireview: Evolution of NURSA, the Nuclear Receptor Signaling Atlas.
Molecular endocrinology (Baltimore, Md.) Jun, 2009 | Pubmed ID: 19423650
Deconstructing repression: evolving models of co-repressor action.
Nature reviews. Genetics Feb, 2010 | Pubmed ID: 20084085
Macrophages, inflammation, and insulin resistance.
Annual review of physiology , 2010 | Pubmed ID: 20148674
Pharmacological correction of a defect in PPAR-gamma signaling ameliorates disease severity in Cftr-deficient mice.
Nature medicine Mar, 2010 | Pubmed ID: 20154695
Kdo2-lipid A, a TLR4-specific agonist, induces de novo sphingolipid biosynthesis in RAW264.7 macrophages, which is essential for induction of autophagy.
The Journal of biological chemistry Dec, 2010 | Pubmed ID: 20876532
A global clustering algorithm to identify long intergenic non-coding RNA--with applications in mouse macrophages.
PloS one , 2011 | Pubmed ID: 21980340
PPARs and lipid ligands in inflammation and metabolism.
Chemical reviews Oct, 2011 | Pubmed ID: 21988241
Microglial cell origin and phenotypes in health and disease.
Nature reviews. Immunology Oct, 2011 | Pubmed ID: 22025055
Mechanisms establishing TLR4-responsive activation states of inflammatory response genes.
PLoS genetics Dec, 2011 | Pubmed ID: 22174696
A protective strategy against hyperinflammatory responses requiring the nontranscriptional actions of GPS2.
Molecular cell Apr, 2012 | Pubmed ID: 22424771
Regulation of circadian behaviour and metabolism by REV-ERB-α and REV-ERB-β.
Nature Mar, 2012 | Pubmed ID: 22460952
Regulation of microglia activation and deactivation by nuclear receptors.
Glia Jan, 2013 | Pubmed ID: 22987512
Global changes in the nuclear positioning of genes and intra- and interdomain genomic interactions that orchestrate B cell fate.
Nature immunology Dec, 2012 | Pubmed ID: 23064439
Signaling by nuclear receptors.
Cold Spring Harbor perspectives in biology Mar, 2013 | Pubmed ID: 23457262
A combined omics study on activated macrophages--enhanced role of STATs in apoptosis, immunity and lipid metabolism.
Bioinformatics (Oxford, England) Nov, 2013 | Pubmed ID: 23981351
Vespucci: a system for building annotated databases of nascent transcripts.
Nucleic acids research Feb, 2014 | Pubmed ID: 24304890
Epigenomics of macrophages.
Immunological reviews Nov, 2014 | Pubmed ID: 25319330
The choreography of neuroinflammation in Huntington's disease.
Trends in immunology Jun, 2015 | Pubmed ID: 26001312
Transcription factor Nr4a1 couples sympathetic and inflammatory cues in CNS-recruited macrophages to limit neuroinflammation.
Nature immunology Dec, 2015 | Pubmed ID: 26523867
Metabolic and Epigenetic Coordination of T Cell and Macrophage Immunity.
Immunity May, 2017 | Pubmed ID: 28514673
Massively Parallel Sequencing of Peritoneal and Splenic B Cell Repertoires Highlights Unique Properties of B-1 Cell Antibodies.
Journal of immunology (Baltimore, Md. : 1950) Mar, 2018 | Pubmed ID: 29378911
Nature and nurture of tissue-specific macrophage phenotypes.
Atherosclerosis Feb, 2019 | Pubmed ID: 30343819
Diverse motif ensembles specify non-redundant DNA binding activities of AP-1 family members in macrophages.
Nature communications Jan, 2019 | Pubmed ID: 30679424
SF2523: Dual PI3K/BRD4 Inhibitor Blocks Tumor Immunosuppression and Promotes Adaptive Immune Responses in Cancer.
Molecular cancer therapeutics Jun, 2019 | Pubmed ID: 31018997
Transcriptional and epigenetic regulation of macrophages in atherosclerosis.
Nature reviews. Cardiology Apr, 2020 | Pubmed ID: 31578516
Brain cell type-specific enhancer-promoter interactome maps and diseaserisk association.
Science (New York, N.Y.) Nov, 2019 | Pubmed ID: 31727856
Neutralization of Oxidized Phospholipids Ameliorates Non-alcoholic Steatohepatitis.
Cell metabolism Jan, 2020 | Pubmed ID: 31761566
deficient microglia exhibit a premature aging transcriptome.
Life science alliance Dec, 2019 | Pubmed ID: 31792059
Transcriptomic and epigenetic mechanisms underlying myeloid diversity in the lung.
Nature immunology Feb, 2020 | Pubmed ID: 31959980
Macrophage Syk-PI3Kγ Inhibits Antitumor Immunity: SRX3207, a Novel Dual Syk-PI3K Inhibitory Chemotype Relieves Tumor Immunosuppression.
Molecular cancer therapeutics Mar, 2020 | Pubmed ID: 31974273
Coordinated demethylation of H3K9 and H3K27 is required for rapid inflammatory responses of endothelial cells.
The EMBO journal 04, 2020 | Pubmed ID: 32125007
ZNF263 is a transcriptional regulator of heparin and heparan sulfate biosynthesis.
Proceedings of the National Academy of Sciences of the United States of America Apr, 2020 | Pubmed ID: 32277030
Microanatomy of the Human Atherosclerotic Plaque by Single-Cell Transcriptomics.
Circulation research 11, 2020 | Pubmed ID: 32981416
Monocyte Regulation in Homeostasis and Malignancy.
Trends in immunology Feb, 2021 | Pubmed ID: 33446416
Nuclei isolation of multiple brain cell types for omics interrogation.
Nature protocols Mar, 2021 | Pubmed ID: 33495627
Heterogeneity of HSCs in a Mouse Model of NASH.
Hepatology (Baltimore, Md.) Aug, 2021 | Pubmed ID: 33550587
PI3Kγ inhibition suppresses microglia/TAM accumulation in glioblastoma microenvironment to promote exceptional temozolomide response.
Proceedings of the National Academy of Sciences of the United States of America Apr, 2021 | Pubmed ID: 33846242
A Cdk4/6-dependent phosphorylation gradient regulates the early to late G1 phase transition.
Scientific reports Jul, 2021 | Pubmed ID: 34282211
Clonal hematopoiesis driven by DNMT3A and TET2 mutations: role in monocyte and macrophage biology and atherosclerotic cardiovascular disease.
Current opinion in hematology Jan, 2022 | Pubmed ID: 34654019
Systematic analysis of naturally occurring insertions and deletions that alter transcription factor spacing identifies tolerant and sensitive transcription factor pairs.
eLife Jan, 2022 | Pubmed ID: 35049498
Monosodium urate crystals regulate a unique JNK-dependent macrophage metabolic and inflammatory response.
Cell reports Mar, 2022 | Pubmed ID: 35263587
The Lung Microenvironment Instructs Gene Transcription in Neonatal and Adult Alveolar Macrophages.
Journal of immunology (Baltimore, Md. : 1950) Apr, 2022 | Pubmed ID: 35354612
DNA methyltransferase 3 alpha and TET methylcytosine dioxygenase 2 restrain mitochondrial DNA-mediated interferon signaling in macrophages.
Immunity Aug, 2022 | Pubmed ID: 35931086
Shared Mechanisms between Cardiovascular Disease and NAFLD.
Seminars in liver disease Nov, 2022 | Pubmed ID: 36008083
Human microglia phenotypes in the brain associated with HIV infection.
Current opinion in neurobiology Dec, 2022 | Pubmed ID: 36194988
Microglia states and nomenclature: A field at its crossroads.
Neuron Nov, 2022 | Pubmed ID: 36327895
CSF1R-Mediated Myeloid Cell Depletion Prolongs Lifespan But Aggravates Distinct Motor Symptoms in a Model of Multiple System Atrophy.
The Journal of neuroscience : the official journal of the Society for Neuroscience Oct, 2022 | Pubmed ID: 36333098
A prebiotic diet modulates microglial states and motor deficits in α-synuclein overexpressing mice.
eLife Nov, 2022 | Pubmed ID: 36346385
Expansion of interferon inducible gene pool via USP18 inhibition promotes cancer cell pyroptosis.
Nature communications Jan, 2023 | Pubmed ID: 36646704
Deep learning predicts the impact of regulatory variants on cell-type-specific enhancers in the brain.
Bioinformatics advances , 2023 | Pubmed ID: 36726730
Shp2 Deficiency in Kupffer Cells and Hepatocytes Aggravates Hepatocarcinogenesis by Recruiting Non-Kupffer Macrophages.
Cellular and molecular gastroenterology and hepatology , 2023 | Pubmed ID: 36828281
Integrated analysis of single-cell chromatin state and transcriptome identified common vulnerability despite glioblastoma heterogeneity.
Proceedings of the National Academy of Sciences of the United States of America May, 2023 | Pubmed ID: 37155843
Inhibition of DHCR24 activates LXRα to ameliorate hepatic steatosis and inflammation.
EMBO molecular medicine Aug, 2023 | Pubmed ID: 37357756
Exposure of iPSC-derived human microglia to brain substrates enables the generation and manipulation of diverse transcriptional states in vitro.
Nature immunology Aug, 2023 | Pubmed ID: 37500887
RANK ligand converts the NCoR/HDAC3 co-repressor to a PGC1β- and RNA-dependent co-activator of osteoclast gene expression.
Molecular cell Oct, 2023 | Pubmed ID: 37751740
A TLR4/TRAF6-dependent signaling pathway mediates NCoR coactivator complex formation for inflammatory gene activation.
Proceedings of the National Academy of Sciences of the United States of America Jan, 2024 | Pubmed ID: 38165941
Gene expression and chromatin conformation of microglia in virally suppressed people with HIV.
Life science alliance Oct, 2024 | Pubmed ID: 39060113
Interpretation of Neurodegenerative GWAS Risk Alleles in Microglia and their Interplay with Other Cell Types.
Advances in neurobiology , 2024 | Pubmed ID: 39207711
Proinflammatory immune cells disrupt angiogenesis and promote germinal matrix hemorrhage in prenatal human brain.
Nature neuroscience Sep, 2024 | Pubmed ID: 39349662
Direct and indirect regulation of β-glucocerebrosidase by the transcription factors USF2 and ONECUT2.
NPJ Parkinson's disease Oct, 2024 | Pubmed ID: 39438499
Brian Dinh1,
Marten A. Hoeksema2,
Nathanael J. Spann3,
Jacob Rendler1,
Isidoro Cobo4,5,
Christopher K. Glass3,6,
Calvin Yeang1
1Division of Cardiology, Department of Medicine, University of California San Diego,
2Department of Medical Biochemistry, Amsterdam Immunity and Infection: Inflammatory diseases; Amsterdam Cardiovascular Sciences: Atherosclerosis and Ischemic Syndrome, Amsterdam UMC location University of Amsterdam,
3Department of Cellular and Molecular Medicine, University of California San Diego,
4Division of Clinical Immunology & Rheumatology, Department of Medicine, Heersink School of Medicine, University of Alabama at Birmingham,
5Comprehensive Arthritis, Musculoskeletal, Bone and Autoimmunity Center, Heersink School of Medicine, University of Alabama at Birmingham,
6Department of Medicine, University of California San Diego