Department of River Ecology
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Investigation of lotic microbial aggregates by a combined technique of fluorescent in situ hybridization and lectin-binding-analysis.
Journal of microbiological methods Mar, 2002 | Pubmed ID: 11777585
Assessment of fluorochromes for two-photon laser scanning microscopy of biofilms.
Applied and environmental microbiology Feb, 2002 | Pubmed ID: 11823234
Photolysis and biodegradation of selected resin acids in River Saale water, Germany.
Journal of environmental science and health. Part A, Toxic/hazardous substances & environmental engineering , 2003 | Pubmed ID: 14672312
Three-dimensional differentiation of photo-autotrophic biofilm constituents by multi-channel laser scanning microscopy (single-photon and two-photon excitation).
Journal of microbiological methods Feb, 2004 | Pubmed ID: 14744445
Community structure and photosynthetic activity of epilithon from a highly acidic (pH < or = 2) mountain stream in Patagonia, Argentina.
Extremophiles : life under extreme conditions Dec, 2004 | Pubmed ID: 15635484
Effects of selected pharmaceuticals on riverine biofilm communities.
Canadian journal of microbiology Aug, 2005 | Pubmed ID: 16234864
Three stages of a biofilm community developing at the liquid-liquid interface between polychlorinated biphenyls and water.
Applied and environmental microbiology Nov, 2005 | Pubmed ID: 16269772
Bacterial extracellular DNA forming a defined network-like structure.
FEMS microbiology letters Sep, 2006 | Pubmed ID: 16907736
Contribution of alginate and levan production to biofilm formation by Pseudomonas syringae.
Microbiology (Reading, England) Oct, 2006 | Pubmed ID: 17005972
Structure and shear strength of microbial biofilms as determined with confocal laser scanning microscopy and fluid dynamic gauging using a novel rotating disc biofilm reactor.
Biotechnology and bioengineering Nov, 2007 | Pubmed ID: 17421046
Structural and functional responses of river biofilm communities to the nonsteroidal anti-inflammatory diclofenac.
Environmental toxicology and chemistry / SETAC Apr, 2007 | Pubmed ID: 17447540
A flow-lane incubator for studying freshwater and marine phototrophic biofilms.
Journal of microbiological methods Aug, 2007 | Pubmed ID: 17590463
The EPS matrix: the "house of biofilm cells".
Journal of bacteriology Nov, 2007 | Pubmed ID: 17675377
Physiological adaptation of a nitrate-storing Beggiatoa sp. to diel cycling in a phototrophic hypersaline mat.
Applied and environmental microbiology Nov, 2007 | Pubmed ID: 17766448
In situ activity of suspended and immobilized microbial communities as measured by fluorescence lifetime imaging.
Applied and environmental microbiology Jan, 2008 | Pubmed ID: 17981940
Enrichment of anaerobic benzene-degrading microorganisms by in situ microcosms.
FEMS microbiology ecology Jan, 2008 | Pubmed ID: 18081593
Interaction between biofilm development, structure and detachment in rotating annular reactors.
Bioprocess and biosystems engineering Oct, 2008 | Pubmed ID: 18320233
Architecture of Deinococcus geothermalis biofilms on glass and steel: a lectin study.
Environmental microbiology Jul, 2008 | Pubmed ID: 18373677
Application of two component biodegradable carriers in a particle-fixed biofilm airlift suspension reactor: development and structure of biofilms.
Bioprocess and biosystems engineering Jan, 2009 | Pubmed ID: 18379827
In situ detection of bacteria in calcified biofilms using FISH and CARD-FISH.
Journal of microbiological methods Sep, 2008 | Pubmed ID: 18571259
In situ detection of freshwater fungi in an alpine stream by new taxon-specific fluorescence in situ hybridization probes.
Applied and environmental microbiology Oct, 2008 | Pubmed ID: 18776035
3D finite element model of biofilm detachment using real biofilm structures from CLSM data.
Biotechnology and bioengineering May, 2009 | Pubmed ID: 19191328
Imaging and quantifying virus fluorescence signals on aquatic aggregates: a new method and its implication for aquatic microbial ecology.
FEMS microbiology ecology Jun, 2009 | Pubmed ID: 19416353
Structure and composition of aggregates in two large European rivers, based on confocal laser scanning microscopy and image and statistical analyses.
Applied and environmental microbiology Sep, 2009 | Pubmed ID: 19633114
Fungal mycelia allow chemotactic dispersal of polycyclic aromatic hydrocarbon-degrading bacteria in water-unsaturated systems.
Environmental microbiology Jun, 2010 | Pubmed ID: 19691501
Enrichment and characterization of a sulfate-reducing toluene-degrading microbial consortium by combining in situ microcosms and stable isotope probing techniques.
FEMS microbiology ecology Feb, 2010 | Pubmed ID: 19951369
Aerated treatment pond technology with biofilm promoting mats for the bioremediation of benzene, MTBE and ammonium contaminated groundwater.
Water research Mar, 2010 | Pubmed ID: 20074770
Advanced imaging techniques for assessment of structure, composition and function in biofilm systems.
FEMS microbiology ecology Apr, 2010 | Pubmed ID: 20180852
Morphology of Filamentous Fungi: Linking Cellular Biology to Process Engineering Using Aspergillus niger.
Advances in biochemical engineering/biotechnology , 2010 | Pubmed ID: 20490972
Online assessment of biofilm development, sloughing and forced detachment in tube reactor by means of magnetic resonance microscopy.
Biotechnology and bioengineering Sep, 2010 | Pubmed ID: 20506514
Vacuolated Beggiatoa-like filaments from different hypersaline environments form a novel genus.
Environmental microbiology Dec, 2011 | Pubmed ID: 21651683
Dissolution of calcite in the twilight zone: bacterial control of dissolution of sinking planktonic carbonates is unlikely.
PloS one , 2011 | Pubmed ID: 22102861
Calcite biomineralization by bacterial isolates from the recently discovered pristine karstic herrenberg cave.
Applied and environmental microbiology Feb, 2012 | Pubmed ID: 22179248
Electron transfer and biofilm formation of Shewanella putrefaciens as function of anode potential.
Bioelectrochemistry (Amsterdam, Netherlands) Oct, 2013 | Pubmed ID: 22658509
Evidence for methane production by saprotrophic fungi.
Nature communications , 2012 | Pubmed ID: 22948828
Impact of mycelia on the accessibility of fluorene to PAH-degrading bacteria.
Environmental science & technology Jul, 2013 | Pubmed ID: 23452287
Chip-calorimetric monitoring of biofilm eradication with antibiotics provides mechanistic information.
International journal of medical microbiology : IJMM Apr, 2013 | Pubmed ID: 23453494
Insights into the structure and metabolic function of microbes that shape pelagic iron-rich aggregates ("iron snow").
Applied and environmental microbiology Jul, 2013 | Pubmed ID: 23645202
Benzene and sulfide removal from groundwater treated in a microbial fuel cell.
Biotechnology and bioengineering Dec, 2013 | Pubmed ID: 23775304
Extracellular DNA in adhesion and biofilm formation of four environmental isolates: a quantitative study.
FEMS microbiology ecology Dec, 2013 | Pubmed ID: 23786537
Mapping glycoconjugate-mediated interactions of marine Bacteroidetes with diatoms.
Systematic and applied microbiology Sep, 2013 | Pubmed ID: 23809997
Assessment of bacterial and structural dynamics in aerobic granular biofilms.
Frontiers in microbiology , 2013 | Pubmed ID: 23847600
A chip-calorimetric approach to the analysis of Ag nanoparticle caused inhibition and inactivation of beads-grown bacterial biofilms.
Journal of microbiological methods Nov, 2013 | Pubmed ID: 23968644
Detection and quantification of a mycorrhization helper bacterium and a mycorrhizal fungus in plant-soil microcosms at different levels of complexity.
BMC microbiology , 2013 | Pubmed ID: 24025151
Advanced techniques for in situ analysis of the biofilm matrix (structure, composition, dynamics) by means of laser scanning microscopy.
Methods in molecular biology (Clifton, N.J.) , 2014 | Pubmed ID: 24664825
Investigation of microbial biofilm structure by laser scanning microscopy.
Advances in biochemical engineering/biotechnology , 2014 | Pubmed ID: 24840778
Arsenic-rich Acid mine water with extreme arsenic concentration: mineralogy, geochemistry, microbiology, and environmental implications.
Environmental science & technology Dec, 2014 | Pubmed ID: 25365451
Quality of dissolved organic matter affects planktonic but not biofilm bacterial production in streams.
The Science of the total environment Feb, 2015 | Pubmed ID: 25460970