Department of Energy,
Environmental and Chemical Engineering,
Department of Energy, Environmental and Chemical Engineering
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Evaluating factors that influence microbial phenanthrene biodegradation rates by regression with categorical variables.
Chemosphere Apr, 2005 | Pubmed ID: 15792671
Controlled release of nitrate and sulfate to enhance anaerobic bioremediation of phenanthrene in marine sediments.
Environmental science & technology May, 2005 | Pubmed ID: 15926591
Evaluation of the effects of various culture conditions on Cr(VI) reduction by Shewanella oneidensis MR-1 in a novel high-throughput mini-bioreactor.
Biotechnology and bioengineering Sep, 2006 | Pubmed ID: 16732598
Depth-related influences on biodegradation rates of phenanthrene in polluted marine sediments of Puget Sound, WA.
Marine pollution bulletin Nov, 2006 | Pubmed ID: 16780896
A kinetic model describing Shewanella oneidensis MR-1 growth, substrate consumption, and product secretion.
Biotechnology and bioengineering Jan, 2007 | Pubmed ID: 16865732
Shewanella oneidensis MR-1 fluxome under various oxygen conditions.
Applied and environmental microbiology Feb, 2007 | Pubmed ID: 17098921
Anaerobic central metabolic pathways in Shewanella oneidensis MR-1 reinterpreted in the light of isotopic metabolite labeling.
Journal of bacteriology Feb, 2007 | Pubmed ID: 17114268
Charge-associated effects of fullerene derivatives on microbial structural integrity and central metabolism.
Nano letters Mar, 2007 | Pubmed ID: 17288489
Mathematical analysis of the whole core injection method accuracy for measuring phenanthrene biodegradation rates in undisturbed marine sediments.
Chemosphere Jun, 2007 | Pubmed ID: 17412394
Flux analysis of central metabolic pathways in Geobacter metallireducens during reduction of soluble Fe(III)-nitrilotriacetic acid.
Applied and environmental microbiology Jun, 2007 | Pubmed ID: 17468285
Isotopomer distributions in amino acids from a highly expressed protein as a proxy for those from total protein.
Analytical chemistry Feb, 2008 | Pubmed ID: 18179240
Separation and mass spectrometry in microbial metabolomics.
Current opinion in microbiology Jun, 2008 | Pubmed ID: 18538626
Analysis of metabolic pathways and fluxes in a newly discovered thermophilic and ethanol-tolerant Geobacillus strain.
Biotechnology and bioengineering Apr, 2009 | Pubmed ID: 19016470
Advances in analysis of microbial metabolic fluxes via (13)C isotopic labeling.
Mass spectrometry reviews Mar-Apr, 2009 | Pubmed ID: 19025966
Metabolic flux analysis of Shewanella spp. reveals evolutionary robustness in central carbon metabolism.
Biotechnology and bioengineering Mar, 2009 | Pubmed ID: 19031428
Central metabolism in Mycobacterium smegmatis during the transition from O2-rich to O2-poor conditions as studied by isotopomer-assisted metabolite analysis.
Biotechnology letters Aug, 2009 | Pubmed ID: 19357814
Characterization of the central metabolic pathways in Thermoanaerobacter sp. strain X514 via isotopomer-assisted metabolite analysis.
Applied and environmental microbiology Aug, 2009 | Pubmed ID: 19525270
Investigation of carbon metabolism in "Dehalococcoides ethenogenes" strain 195 by use of isotopomer and transcriptomic analyses.
Journal of bacteriology Aug, 2009 | Pubmed ID: 19525347
Invariability of central metabolic flux distribution in Shewanella oneidensis MR-1 under environmental or genetic perturbations.
Biotechnology progress Sep-Oct, 2009 | Pubmed ID: 19610125
Carbohydrate metabolism and carbon fixation in Roseobacter denitrificans OCh114.
PloS one , 2009 | Pubmed ID: 19794911
Alternative isoleucine synthesis pathway in cyanobacterial species.
Microbiology (Reading, England) Feb, 2010 | Pubmed ID: 19875435
Study of stationary phase metabolism via isotopomer analysis of amino acids from an isolated protein.
Biotechnology progress Jan-Feb, 2010 | Pubmed ID: 19899123
Bacterial responses to Cu-doped TiO(2) nanoparticles.
The Science of the total environment Mar, 2010 | Pubmed ID: 19931887
Comparative eco-toxicities of nano-ZnO particles under aquatic and aerosol exposure modes.
Environmental science & technology Feb, 2010 | Pubmed ID: 20102184
Mixotrophic and photoheterotrophic metabolism in Cyanothece sp. ATCC 51142 under continuous light.
Microbiology (Reading, England) Aug, 2010 | Pubmed ID: 20430816
Anti-microbial activities of aerosolized transition metal oxide nanoparticles.
Chemosphere Jul, 2010 | Pubmed ID: 20478610
Carbon flow of heliobacteria is related more to clostridia than to the green sulfur bacteria.
The Journal of biological chemistry Nov, 2010 | Pubmed ID: 20807773
Metabolic flux analysis of the mixotrophic metabolisms in the green sulfur bacterium Chlorobaculum tepidum.
The Journal of biological chemistry Dec, 2010 | Pubmed ID: 20937805
Viability and metal reduction of Shewanella oneidensis MR-1 under CO2 stress: implications for ecological effects of CO2 leakage from geologic CO2 sequestration.
Environmental science & technology Dec, 2010 | Pubmed ID: 21058700
Evaluating Factors That Influence Microbial Synthesis Yields by Linear Regression with Numerical and Ordinal Variables.
Biotechnology and bioengineering Nov, 2010 | Pubmed ID: 21077138
Nanoparticles facilitate gene delivery to microorganisms via an electrospray process.
Journal of microbiological methods Feb, 2011 | Pubmed ID: 21144867
Bridging the gap between fluxomics and industrial biotechnology.
Journal of biomedicine & biotechnology , 2010 | Pubmed ID: 21274256
Evaluating factors that influence microbial synthesis yields by linear regression with numerical and ordinal variables.
Biotechnology and bioengineering Apr, 2011 | Pubmed ID: 21404262
Statistics-based model for prediction of chemical biosynthesis yield from Saccharomyces cerevisiae.
Microbial cell factories , 2011 | Pubmed ID: 21689458
Evaluation of isotope discrimination in (13)C-based metabolic flux analysis.
Analytical biochemistry Oct, 2011 | Pubmed ID: 21745456
Cu-doped TiO(2) nanoparticles enhance survival of Shewanella oneidensis MR-1 under ultraviolet light (UV) exposure.
The Science of the total environment Oct, 2011 | Pubmed ID: 21855961
Carbon metabolic pathways in phototrophic bacteria and their broader evolutionary implications.
Frontiers in microbiology , 2011 | Pubmed ID: 21866228
Selective utilization of exogenous amino acids by Dehalococcoides ethenogenes strain 195 and its effects on growth and dechlorination activity.
Applied and environmental microbiology Nov, 2011 | Pubmed ID: 21890673
Role of dopant concentration, crystal phase and particle size on microbial inactivation of Cu-doped TiO2 nanoparticles.
Nanotechnology Oct, 2011 | Pubmed ID: 21918299
Correlation of genomic and physiological traits of thermoanaerobacter species with biofuel yields.
Applied and environmental microbiology Nov, 2011 | Pubmed ID: 21948836
Integrating Flux Balance Analysis into Kinetic Models to Decipher the Dynamic Metabolism of Shewanella oneidensis MR-1.
PLoS computational biology Feb, 2012 | Pubmed ID: 22319437