Herman P. Spaink

Lotus japonicus gene Ljsbp is highly conserved among plants and animals and encodes a homologue to the mammalian selenium-binding proteins.

Plant-microbe interactions: a receptor in symbiotic dialogue.

Novel lipochitin oligosaccharide structures produced by Rhizobium etli KIM5s.

Genetic analysis of a pH-regulated operon from Rhizobium tropici CIAT899 involved in acid tolerance and nodulation competitiveness.

14-3-3 isoforms and pattern formation during barley microspore embryogenesis.

Specific activation of ERK pathways by chitin oligosaccharides in embryonic zebrafish cell lines.

Structural motifs in the RNA encoded by the early nodulation gene enod40 of soybean.

Auxin distribution in Lotus japonicus during root nodule development.

Expression analysis of the Toll-like receptor and TIR domain adaptor families of zebrafish.

Single-molecule imaging of the H-ras membrane-anchor reveals domains in the cytoplasmic leaflet of the cell membrane.

Has2 is required upstream of Rac1 to govern dorsal migration of lateral cells during zebrafish gastrulation.

Isoform-specific differences in rapid nucleocytoplasmic shuttling cause distinct subcellular distributions of 14-3-3 sigma and 14-3-3 zeta.

Specific recognition of bacteria by plant LysM domain receptor kinases.

DNA computing using single-molecule hybridization detection.

Time-lapse tracking of barley androgenesis reveals position-determined cell death within pro-embryos.

Different subcellular localization and trafficking properties of KNOX class 1 homeodomain proteins from rice.

Programmed cell death during the transition from multicellular structures to globular embryos in barley androgenesis.

Transcriptome profiling of adult zebrafish at the late stage of chronic tuberculosis due to Mycobacterium marinum infection.

Single-molecule diffusion measurements of H-Ras at the plasma membrane of live cells reveal microdomain localization upon activation.

Genomic annotation and expression analysis of the zebrafish Rho small GTPase family during development and bacterial infection.

Gene expression profiling of the long-term adaptive response to hypoxia in the gills of adult zebrafish.

MyD88 innate immune function in a zebrafish embryo infection model.

The production of species-specific highly unsaturated fatty acyl-containing LCOs from Rhizobium leguminosarum bv. trifolii is stringently regulated by nodD and involves the nodRL genes.

Cloning, functional expression and characterization of Mesorhizobium loti arylamine N-acetyltransferases: rhizobial symbiosis supplies leguminous plants with the xenobiotic N-acetylation pathway.

Characterization and expression patterns of the MAPK family in zebrafish.

DNA computing of solutions to knapsack problems.

Single-molecule diffusion reveals similar mobility for the Lck, H-ras, and K-ras membrane anchors.

Functions of the MAPK family in vertebrate-development.

Characterization of genomic clones and expression analysis of the three types of superoxide dismutases during nodule development in Lotus japonicus.

Identification and real-time imaging of a myc-expressing neutrophil population involved in inflammation and mycobacterial granuloma formation in zebrafish.

Discovery of a functional glucocorticoid receptor beta-isoform in zebrafish.

Model systems for infectious disease and cancer in zebrafish: a report on an EMBO workshop held at the Lorentz Center, Leiden, The Netherlands, July 16-18, 2007.

Magnetic resonance microscopy of the adult zebrafish.

Genetic and transcriptome characterization of model zebrafish cell lines.

ZebraFISH: fluorescent in situ hybridization protocol and three-dimensional imaging of gene expression patterns.

ERK1 and ERK2 MAPK are key regulators of distinct gene sets in zebrafish embryogenesis.

A spatially restricted increase in receptor mobility is involved in directional sensing during Dictyostelium discoideum chemotaxis.

Distinct functions for ERK1 and ERK2 in cell migration processes during zebrafish gastrulation.

Candidates for membrane progestin receptors--past approaches and future challenges.

Male silver eels mature by swimming.

Photothermal detection of individual gold nanoparticles: perspectives for high-throughput screening.

Analysis of interactions of signaling proteins with phage-displayed ligands by fluorescence correlation spectroscopy.

Transcriptome profiling and functional analyses of the zebrafish embryonic innate immune response to Salmonella infection.

Specificity of the zebrafish host transcriptome response to acute and chronic mycobacterial infection and the role of innate and adaptive immune components.

Zebrafish development and regeneration: new tools for biomedical research.

Deep sequencing of the zebrafish transcriptome response to mycobacterium infection.

Zebrafish reward mutants reveal novel transcripts mediating the behavioral effects of amphetamine.

Single-molecule microscopy reveals membrane microdomain organization of cells in a living vertebrate.

Temporal expression of hepatic estrogen receptor 1, vitellogenin1 and vitellogenin2 in European silver eels.

Identification of hoxb1b downstream genes: hoxb1b as a regulatory factor controlling transcriptional networks and cell movement during zebrafish gastrulation.

Disease modeling in zebrafish: cancer and immune responses--a report on a workshop held in Spoleto, Italy, July 20-22, 2009.

RNA isolation method for single embryo transcriptome analysis in zebrafish.

Swimming suppresses hepatic vitellogenesis in European female silver eels as shown by expression of the estrogen receptor 1, vitellogenin1 and vitellogenin2 in the liver.

Macrophage-specific gene functions in Spi1-directed innate immunity.

In vivo magnetic resonance imaging to detect malignant melanoma in adult zebrafish.

Integrating heterogeneous sequence information for transcriptome-wide microarray design; a Zebrafish example.

Deep sequencing of the innate immune transcriptomic response of zebrafish embryos to Salmonella infection.

Transcriptome analysis of Traf6 function in the innate immune response of zebrafish embryos.

Establishing zebrafish as a novel exercise model: swimming economy, swimming-enhanced growth and muscle growth marker gene expression.

The epigenetic regulator Histone Deacetylase 1 promotes transcription of a core neurogenic programme in zebrafish embryos.

Host-pathogen interactions made transparent with the zebrafish model.

A high-throughput screen for tuberculosis progression.

First artificial hybrid of the eel species Anguilla australis and Anguilla anguilla.

Quantification of GPCR internalization by single-molecule microscopy in living cells.

Zebrafish embryos and larvae: a new generation of disease models and drug screens.

Rapid screening of innate immune gene expression in zebrafish using reverse transcription - multiplex ligation-dependent probe amplification.

A ΔRaf1-ER-inducible oncogenic zebrafish liver cell model identifies hepatocellular carcinoma signatures.

Identification of common carp innate immune genes with whole-genome sequencing and RNA-Seq data.

Infectious disease modeling and innate immune function in zebrafish embryos.

Comparison of static immersion and intravenous injection systems for exposure of zebrafish embryos to the natural pathogen Edwardsiella tarda.

An osteosarcoma zebrafish model implicates Mmp-19 and Ets-1 as well as reduced host immune response in angiogenesis and migration.

Automated whole animal bio-imaging assay for human cancer dissemination.

Neutrophil-mediated experimental metastasis is enhanced by VEGFR inhibition in a zebrafish xenograft model.

Primitive Duplicate Hox Clusters in the European Eel's Genome.

A full-body transcriptome and proteome resource for the European common carp.

Pathway analysis of systemic transcriptome responses to injected polystyrene particles in zebrafish larvae.

Intestinal microbiome adjusts the innate immune setpoint during colonization through negative regulation of MyD88.