JoVE Journal

Genetics

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A Virtual Machine Platform for Non-Computer Professionals for Using Deep Learning to Classify Biological Sequences of Metagenomic Data

3.7K Views

09:34 min

September 25th, 2021

September 25th, 2021

3,750 Views

0:07

Introduction

1:35

The Installation of the Virtual Machine

4:11

Create Shared Folders and Prepare the Files for the Training Set and Test Set

6:55

Digitize the Biological Sequences Using “One‐Shot” Encoding Form

7:27

Train and Test the Artificial Neural Network

8:12

Result

8:52

Conclusion

文字起こし

A variety of biological sequence classification task, such as species classification, gene function classification, and wire host classification are expected processes in many metagenomic data analyzes. Since metagenomic data contain a large numbe

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This tutorial describes a simple method to construct a deep learning algorithm for performing 2-class sequence classification of metagenomic data.

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