Bio5 Institute,
The School of Plant Sciences,
Genetics GIDP
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Culture-independent molecular analysis of microbial constituents of the healthy human outer ear.
Journal of clinical microbiology Jan, 2003 | Pubmed ID: 12517864
Differential inhibition of inducible T cell cytokine secretion by potent iron chelators.
Journal of biomolecular screening Mar, 2005 | Pubmed ID: 15799959
Arabidopsis intragenomic conserved noncoding sequence.
Proceedings of the National Academy of Sciences of the United States of America Feb, 2007 | Pubmed ID: 17301222
G-boxes, bigfoot genes, and environmental response: characterization of intragenomic conserved noncoding sequences in Arabidopsis.
The Plant cell May, 2007 | Pubmed ID: 17496117
How to usefully compare homologous plant genes and chromosomes as DNA sequences.
The Plant journal : for cell and molecular biology Feb, 2008 | Pubmed ID: 18269575
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).
Nature Apr, 2008 | Pubmed ID: 18432245
Many or most genes in Arabidopsis transposed after the origin of the order Brassicales.
Genome research Dec, 2008 | Pubmed ID: 18836034
Finding and comparing syntenic regions among Arabidopsis and the outgroups papaya, poplar, and grape: CoGe with rosids.
Plant physiology Dec, 2008 | Pubmed ID: 18952863
The Sorghum bicolor genome and the diversification of grasses.
Nature Jan, 2009 | Pubmed ID: 19189423
cis-Inhibition of Notch by endogenous Delta biases the outcome of lateral inhibition.
Current biology : CB Aug, 2009 | Pubmed ID: 19631544
The evolution of a high copy gene array in Arabidopsis.
Journal of molecular evolution Jun, 2010 | Pubmed ID: 20495794
Following tetraploidy in maize, a short deletion mechanism removed genes preferentially from one of the two homologs.
PLoS biology Jun, 2010 | Pubmed ID: 20613864
Using genomic sequencing for classical genetics in E. coli K12.
PloS one Feb, 2011 | Pubmed ID: 21364914
Screening synteny blocks in pairwise genome comparisons through integer programming.
BMC bioinformatics Apr, 2011 | Pubmed ID: 21501495
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
Science (New York, N.Y.) May, 2011 | Pubmed ID: 21551031
Novel temporal, fine-scale and growth variation phenotypes in roots of adult-stage maize (Zea mays L.) in response to low nitrogen stress.
Plant, cell & environment Dec, 2011 | Pubmed ID: 21848860
Genome-wide analysis of syntenic gene deletion in the grasses.
Genome biology and evolution , 2012 | Pubmed ID: 22275519
Long identical multispecies elements in plant and animal genomes.
Proceedings of the National Academy of Sciences of the United States of America May, 2012 | Pubmed ID: 22496592
The iPlant Collaborative: Cyberinfrastructure for Plant Biology.
Frontiers in plant science , 2011 | Pubmed ID: 22645531
The banana (Musa acuminata) genome and the evolution of monocotyledonous plants.
Nature Aug, 2012 | Pubmed ID: 22801500
Unleashing the genome of brassica rapa.
Frontiers in plant science , 2012 | Pubmed ID: 22866056
Loss of syd-1 from R7 neurons disrupts two distinct phases of presynaptic development.
The Journal of neuroscience : the official journal of the Society for Neuroscience Dec, 2012 | Pubmed ID: 23238725
Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.).
Genome biology , 2013 | Pubmed ID: 23663246
Architecture and evolution of a minute plant genome.
Nature Jun, 2013 | Pubmed ID: 23665961
Whole genome and tandem duplicate retention facilitated glucosinolate pathway diversification in the mustard family.
Genome biology and evolution , 2013 | Pubmed ID: 24171911
Ancient eudicot hexaploidy meets ancestral eurosid gene order.
BMC genomics , 2013 | Pubmed ID: 24564362
The dynamics of functional classes of plant genes in rediploidized ancient polyploids.
BMC bioinformatics , 2013 | Pubmed ID: 24564814
Genome and transcriptome sequencing identifies breeding targets in the orphan crop tef (Eragrostis tef).
BMC genomics Jul, 2014 | Pubmed ID: 25007843
Plant genetics. Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome.
Science (New York, N.Y.) Aug, 2014 | Pubmed ID: 25146293
Comparative genome analyses reveal distinct structure in the saltwater crocodile MHC.
PloS one , 2014 | Pubmed ID: 25503521
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs.
Science (New York, N.Y.) Dec, 2014 | Pubmed ID: 25504731
Gene families as soft cliques with backbones: Amborella contrasted with other flowering plants.
BMC genomics , 2014 | Pubmed ID: 25572777
ALLMAPS: robust scaffold ordering based on multiple maps.
Genome biology Jan, 2015 | Pubmed ID: 25583564
Optical mapping in plant comparative genomics.
GigaScience , 2015 | Pubmed ID: 25699175
Identification of dopamine receptors across the extant avian family tree and analysis with other clades uncovers a polyploid expansion among vertebrates.
Frontiers in neuroscience , 2015 | Pubmed ID: 26500483
The pineapple genome and the evolution of CAM photosynthesis.
Nature genetics Dec, 2015 | Pubmed ID: 26523774
Single-molecule sequencing of the desiccation-tolerant grass Oropetium thomaeum.
Nature Nov, 2015 | Pubmed ID: 26560029
SynFind: Compiling Syntenic Regions across Any Set of Genomes on Demand.
Genome biology and evolution Nov, 2015 | Pubmed ID: 26560340
The iPlant Collaborative: Cyberinfrastructure for Enabling Data to Discovery for the Life Sciences.
PLoS biology Jan, 2016 | Pubmed ID: 26752627
Relevance of in vitro agar based screens to characterize the anti-fungal activities of bacterial endophyte communities.
BMC microbiology Jan, 2016 | Pubmed ID: 26772737
The genome of black raspberry (Rubus occidentalis).
The Plant journal : for cell and molecular biology Sep, 2016 | Pubmed ID: 27228578
Insight into the evolution of the Solanaceae from the parental genomes of Petunia hybrida.
Nature plants , 2016 | Pubmed ID: 27255838
A Novel Treatment Protects Chlorella at Commercial Scale from the Predatory Bacterium Vampirovibrio chlorellavorus.
Frontiers in microbiology , 2016 | Pubmed ID: 27379027
A Genomic Analysis of Factors Driving lincRNA Diversification: Lessons from Plants.
G3 (Bethesda, Md.) Sep, 2016 | Pubmed ID: 27440919
FractBias: a graphical tool for assessing fractionation bias following polyploidy.
Bioinformatics (Oxford, England) Feb, 2017 | Pubmed ID: 27794557
Bringing your tools to CyVerse Discovery Environment using Docker.
F1000Research , 2016 | Pubmed ID: 27803802
SynMap2 & SynMap3D: Web-based whole-genome synteny browsers.
Bioinformatics (Oxford, England) Mar, 2017 | Pubmed ID: 28334338
A Global View of RNA-Protein Interactions Identifies Post-transcriptional Regulators of Root Hair Cell Fate.
Developmental cell Apr, 2017 | Pubmed ID: 28441533
Blake L. Joyce1,2,
Asher K. Haug-Baltzell3,
Jonathan P. Hulvey4,
Fiona McCarthy5,
Upendra Kumar Devisetty1,6,
Eric Lyons1,2,3
1BIO5 Institute, University of Arizona,
2The School of Plant Sciences, University of Arizona,
3Genetics GIDP, University of Arizona,
4Biology Department, University of Massachusetts Amherst,
5School of Animal and Comparative Biomedical Sciences, University of Arizona,
6CyVerse, University of Arizona
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