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Department of Applied Mathematics
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A mathematical model of the dynamics of prion aggregates with chaperone-mediated fragmentation.
Journal of mathematical biology May, 2016 | Pubmed ID: 26297259
Culturomics as a data playground for tests of selection: Mathematical approaches to detecting selection in word use.
Journal of theoretical biology 09, 2016 | Pubmed ID: 26802483
Modeling transposable element dynamics with fragmentation equations.
Mathematical biosciences 08, 2018 | Pubmed ID: 29787745
Generalizing a mathematical model of prion aggregation allows strain coexistence and co-stability by including a novel misfolded species.
Journal of mathematical biology 01, 2019 | Pubmed ID: 30116882
How and why to build a mathematical model: A case study using prion aggregation.
The Journal of biological chemistry 04, 2020 | Pubmed ID: 32005659
Nucleation seed size determines amyloid clearance and establishes a barrier to prion appearance in yeast.
Nature structural & molecular biology 06, 2020 | Pubmed ID: 32367069
Rules of Engagement: A Guide to Developing Agent-Based Models.
Methods in molecular biology (Clifton, N.J.) , 2022 | Pubmed ID: 34719003
UNIVERSITY OF CALIFORNIA, MERCED
Mohammad N. Qasim*,1,2,
Ashley Valle Arevalo*,1,2,
Akshay D. Paropkari*,1,2,
Craig L. Ennis1,2,4,
Suzanne S. Sindi3,
Clarissa J. Nobile1,4,
Aaron D. Hernday1,4
1Department of Molecular and Cell Biology, University of California, Merced,
2Quantitative and Systems Biology Graduate Program, University of California, Merced,
3Department of Applied Mathematics, University of California, Merced,
4Health Sciences Research Institute, University of California, Merced
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