Quanhu Sheng

Fast and accurate identification of semi-tryptic peptides in shotgun proteomics.

Quantitative comparison of sarcomeric phosphoproteomes of neonatal and adult rat hearts.

A computational approach to characterizing bond linkages of glycan isomers using matrix-assisted laser desorption/ionization tandem time-of-flight mass spectrometry.

ProteinQuant Suite: a bundle of automated software tools for label-free quantitative proteomics.

On the estimation of false positives in peptide identifications using decoy search strategy.

A platform to standardize, store, and visualize proteomics experimental data.

A bayesian approach to protein inference problem in shotgun proteomics.

Proteomic changes in the photoreceptor outer segment upon intense light exposure.

SRMBuilder: a user-friendly tool for selected reaction monitoring data analysis.

BuildSummary: using a group-based approach to improve the sensitivity of peptide/protein identification in shotgun proteomics.

Delicate analysis of post-translational modifications on Dishevelled 3.

Serum Proteome Changes in Healthy Subjects with Different Genotypes of NOS1AP in the Chinese Population.

Large scale comparison of gene expression levels by microarrays and RNAseq using TCGA data.

Very low-level heteroplasmy mtDNA variations are inherited in humans.

Systematic assessment of survey scan and MS2-based abundance strategies for label-free quantitative proteomics using high-resolution MS data.

Multi-perspective quality control of Illumina exome sequencing data using QC3.

O18Quant: a semiautomatic strategy for quantitative analysis of high-resolution 16O/18O labeled data.

MultiRankSeq: multiperspective approach for RNAseq differential expression analysis and quality control.

Advanced heat map and clustering analysis using heatmap3.

DupChecker: a bioconductor package for checking high-throughput genomic data redundancy in meta-analysis.

ICan: an optimized ion-current-based quantification procedure with enhanced quantitative accuracy and sensitivity in biomarker discovery.

Illumina human exome genotyping array clustering and quality control.

Detection of internal exon deletion with exon Del.

RNAseqPS: A Web Tool for Estimating Sample Size and Power for RNAseq Experiment.

Preprocessing significantly improves the peptide/protein identification sensitivity of high-resolution isobarically labeled tandem mass spectrometry data.

Monitoring newly synthesized proteins over the adult life span of Caenorhabditis elegans.

Optimization of Search Engines and Postprocessing Approaches to Maximize Peptide and Protein Identification for High-Resolution Mass Data.

Transfer RNA detection by small RNA deep sequencing and disease association with myelodysplastic syndromes.

RNAseq by Total RNA Library Identifies Additional RNAs Compared to Poly(A) RNA Library.

Practicability of detecting somatic point mutation from RNA high throughput sequencing data.

Performance Investigation of Proteomic Identification by HCD/CID Fragmentations in Combination with High/Low-Resolution Detectors on a Tribrid, High-Field Orbitrap Instrument.

High-Resolution Mapping of RNA Polymerases Identifies Mechanisms of Sensitivity and Resistance to BET Inhibitors in t(8;21) AML.

lncRNA expression in the auditory forebrain during postnatal development.

Heterozygosity Ratio, a Robust Global Genomic Measure of Autozygosity and Its Association with Height and Disease Risk.

Multi-perspective quality control of Illumina RNA sequencing data analysis.

RNA Sequencing of Formalin-Fixed, Paraffin-Embedded Specimens for Gene Expression Quantification and Data Mining.