Department of Cancer Biology
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Fast and accurate identification of semi-tryptic peptides in shotgun proteomics.
Bioinformatics (Oxford, England) Jan, 2008 | Pubmed ID: 18033797
Quantitative comparison of sarcomeric phosphoproteomes of neonatal and adult rat hearts.
American journal of physiology. Heart and circulatory physiology Aug, 2008 | Pubmed ID: 18552161
A computational approach to characterizing bond linkages of glycan isomers using matrix-assisted laser desorption/ionization tandem time-of-flight mass spectrometry.
Rapid communications in mass spectrometry : RCM Nov, 2008 | Pubmed ID: 18853404
ProteinQuant Suite: a bundle of automated software tools for label-free quantitative proteomics.
Rapid communications in mass spectrometry : RCM Dec, 2008 | Pubmed ID: 18985620
On the estimation of false positives in peptide identifications using decoy search strategy.
Proteomics Jan, 2009 | Pubmed ID: 19053142
A platform to standardize, store, and visualize proteomics experimental data.
Acta biochimica et biophysica Sinica Apr, 2009 | Pubmed ID: 19352541
A bayesian approach to protein inference problem in shotgun proteomics.
Journal of computational biology : a journal of computational molecular cell biology Aug, 2009 | Pubmed ID: 19645593
Proteomic changes in the photoreceptor outer segment upon intense light exposure.
Journal of proteome research Feb, 2010 | Pubmed ID: 20020778
SRMBuilder: a user-friendly tool for selected reaction monitoring data analysis.
Journal of bioinformatics and computational biology Dec, 2011 | Pubmed ID: 22144253
BuildSummary: using a group-based approach to improve the sensitivity of peptide/protein identification in shotgun proteomics.
Journal of proteome research Mar, 2012 | Pubmed ID: 22217156
Delicate analysis of post-translational modifications on Dishevelled 3.
Journal of proteome research Jul, 2012 | Pubmed ID: 22612246
Serum Proteome Changes in Healthy Subjects with Different Genotypes of NOS1AP in the Chinese Population.
Journal of diabetes research , 2013 | Pubmed ID: 23671866
Large scale comparison of gene expression levels by microarrays and RNAseq using TCGA data.
PloS one , 2013 | Pubmed ID: 23977046
Very low-level heteroplasmy mtDNA variations are inherited in humans.
Journal of genetics and genomics = Yi chuan xue bao Dec, 2013 | Pubmed ID: 24377867
Systematic assessment of survey scan and MS2-based abundance strategies for label-free quantitative proteomics using high-resolution MS data.
Journal of proteome research Apr, 2014 | Pubmed ID: 24635752
Multi-perspective quality control of Illumina exome sequencing data using QC3.
Genomics May-Jun, 2014 | Pubmed ID: 24703969
O18Quant: a semiautomatic strategy for quantitative analysis of high-resolution 16O/18O labeled data.
BioMed research international , 2014 | Pubmed ID: 24901003
MultiRankSeq: multiperspective approach for RNAseq differential expression analysis and quality control.
BioMed research international , 2014 | Pubmed ID: 24977143
Advanced heat map and clustering analysis using heatmap3.
BioMed research international , 2014 | Pubmed ID: 25143956
DupChecker: a bioconductor package for checking high-throughput genomic data redundancy in meta-analysis.
BMC bioinformatics Sep, 2014 | Pubmed ID: 25267467
ICan: an optimized ion-current-based quantification procedure with enhanced quantitative accuracy and sensitivity in biomarker discovery.
Journal of proteome research Dec, 2014 | Pubmed ID: 25285707
Illumina human exome genotyping array clustering and quality control.
Nature protocols Nov, 2014 | Pubmed ID: 25321409
Detection of internal exon deletion with exon Del.
BMC bioinformatics Oct, 2014 | Pubmed ID: 25322818
RNAseqPS: A Web Tool for Estimating Sample Size and Power for RNAseq Experiment.
Cancer informatics , 2014 | Pubmed ID: 25374457
Preprocessing significantly improves the peptide/protein identification sensitivity of high-resolution isobarically labeled tandem mass spectrometry data.
Molecular & cellular proteomics : MCP Feb, 2015 | Pubmed ID: 25435543
Monitoring newly synthesized proteins over the adult life span of Caenorhabditis elegans.
Journal of proteome research Mar, 2015 | Pubmed ID: 25686393
Optimization of Search Engines and Postprocessing Approaches to Maximize Peptide and Protein Identification for High-Resolution Mass Data.
Journal of proteome research Nov, 2015 | Pubmed ID: 26390080
Transfer RNA detection by small RNA deep sequencing and disease association with myelodysplastic syndromes.
BMC genomics Sep, 2015 | Pubmed ID: 26400237
RNAseq by Total RNA Library Identifies Additional RNAs Compared to Poly(A) RNA Library.
BioMed research international , 2015 | Pubmed ID: 26543871
Practicability of detecting somatic point mutation from RNA high throughput sequencing data.
Genomics May, 2016 | Pubmed ID: 27046520
Performance Investigation of Proteomic Identification by HCD/CID Fragmentations in Combination with High/Low-Resolution Detectors on a Tribrid, High-Field Orbitrap Instrument.
PloS one , 2016 | Pubmed ID: 27472422
High-Resolution Mapping of RNA Polymerases Identifies Mechanisms of Sensitivity and Resistance to BET Inhibitors in t(8;21) AML.
Cell reports Aug, 2016 | Pubmed ID: 27498870
lncRNA expression in the auditory forebrain during postnatal development.
Gene Nov, 2016 | Pubmed ID: 27544636
Heterozygosity Ratio, a Robust Global Genomic Measure of Autozygosity and Its Association with Height and Disease Risk.
Genetics Aug, 2016 | Pubmed ID: 27585849
Multi-perspective quality control of Illumina RNA sequencing data analysis.
Briefings in functional genomics Sep, 2016 | Pubmed ID: 27687708
RNA Sequencing of Formalin-Fixed, Paraffin-Embedded Specimens for Gene Expression Quantification and Data Mining.
International journal of genomics , 2016 | Pubmed ID: 27774452
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