National Center for Macromolecular Imaging,
Verna and Marrs McLean Department of Biochemistry and Molecular Biology,
National Center for Macromolecular Imaging, Verna and Marrs McLean Department of Biochemistry and Molecular Biology
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Quaternary structure of human fatty acid synthase by electron cryomicroscopy.
Proceedings of the National Academy of Sciences of the United States of America Jan, 2002 | Pubmed ID: 11756679
Bilamellar cationic liposomes protect adenovectors from preexisting humoral immune responses.
Molecular therapy : the journal of the American Society of Gene Therapy Mar, 2002 | Pubmed ID: 11863412
High resolution structural studies of complex icosahedral viruses: a brief overview.
Virus research Jan, 2002 | Pubmed ID: 11885957
Electron cryo-microscopy of VAT, the archaeal p97/CDC48 homologue from Thermoplasma acidophilum.
Journal of molecular biology Apr, 2002 | Pubmed ID: 11955016
Deriving folds of macromolecular complexes through electron cryomicroscopy and bioinformatics approaches.
Current opinion in structural biology Apr, 2002 | Pubmed ID: 11959506
The skeletal muscle Ca2+ release channel has an oxidoreductase-like domain.
Proceedings of the National Academy of Sciences of the United States of America Sep, 2002 | Pubmed ID: 12218169
Structure of isolated nucleocapsids from venezuelan equine encephalitis virus and implications for assembly and disassembly of enveloped virus.
Journal of virology Jan, 2003 | Pubmed ID: 12477868
Coat protein fold and maturation transition of bacteriophage P22 seen at subnanometer resolutions.
Nature structural biology Feb, 2003 | Pubmed ID: 12536205
Mitochondrial ATP synthasome. Cristae-enriched membranes and a multiwell detergent screening assay yield dispersed single complexes containing the ATP synthase and carriers for Pi and ADP/ATP.
The Journal of biological chemistry Apr, 2003 | Pubmed ID: 12560333
Structure of the herpesvirus major capsid protein.
The EMBO journal Feb, 2003 | Pubmed ID: 12574112
Web-based Simulation for Contrast Transfer Function and Envelope Functions.
Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada Jul, 2001 | Pubmed ID: 12597807
Structure of the type 1 inositol 1,4,5-trisphosphate receptor revealed by electron cryomicroscopy.
The Journal of biological chemistry Jun, 2003 | Pubmed ID: 12714606
Multislice computed tomography angiography in pediatric liver transplantation.
Transplantation Jul, 2003 | Pubmed ID: 12883192
Architecture of the herpes simplex virus major capsid protein derived from structural bioinformatics.
Journal of molecular biology Aug, 2003 | Pubmed ID: 12888351
Virus structure. Preface.
Advances in protein chemistry , 2003 | Pubmed ID: 13677043
Determination of icosahedral virus structures by electron cryomicroscopy at subnanometer resolution.
Advances in protein chemistry , 2003 | Pubmed ID: 13677046
Studying large viruses.
Advances in protein chemistry , 2003 | Pubmed ID: 13677054
The structure of ClpB: a molecular chaperone that rescues proteins from an aggregated state.
Cell Oct, 2003 | Pubmed ID: 14567920
Focal pair merging for contrast enhancement of single particles.
Journal of structural biology Oct-Nov, 2003 | Pubmed ID: 14643210
Applications of a bilateral denoising filter in biological electron microscopy.
Journal of structural biology Oct-Nov, 2003 | Pubmed ID: 14643214
Structure of triglyceride-rich human low-density lipoproteins according to cryoelectron microscopy.
Biochemistry Dec, 2003 | Pubmed ID: 14674775
Object oriented database and electronic notebook for transmission electron microscopy.
Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada Dec, 2003 | Pubmed ID: 14750990
Electron beam coater for reduction of charging in ice-embedded biological specimens using Ti(88)Si(12) alloy.
Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada Dec, 2003 | Pubmed ID: 14750991
Experimental verification of conformational variation of human fatty acid synthase as predicted by normal mode analysis.
Structure (London, England : 1993) Feb, 2004 | Pubmed ID: 14962379
Mitochondrial ATP synthasome: three-dimensional structure by electron microscopy of the ATP synthase in complex formation with carriers for Pi and ADP/ATP.
The Journal of biological chemistry Jul, 2004 | Pubmed ID: 15166242
A 9 angstroms single particle reconstruction from CCD captured images on a 200 kV electron cryomicroscope.
Journal of structural biology Aug, 2004 | Pubmed ID: 15193640
Conformational changes in Sindbis virions resulting from exposure to low pH and interactions with cells suggest that cell penetration may occur at the cell surface in the absence of membrane fusion.
Virology Jul, 2004 | Pubmed ID: 15207623
SARS in newborns and children.
Biology of the neonate , 2004 | Pubmed ID: 15218286
Seeing GroEL at 6 A resolution by single particle electron cryomicroscopy.
Structure (London, England : 1993) Jul, 2004 | Pubmed ID: 15242589
Structure of the bifunctional and Golgi-associated formiminotransferase cyclodeaminase octamer.
The EMBO journal Aug, 2004 | Pubmed ID: 15272307
Structure of the acrosomal bundle.
Nature Sep, 2004 | Pubmed ID: 15343340
Structure of Ca2+ release channel at 14 A resolution.
Journal of molecular biology Jan, 2005 | Pubmed ID: 15581887
Structural characterization of components of protein assemblies by comparative modeling and electron cryo-microscopy.
Journal of structural biology Feb, 2005 | Pubmed ID: 15681235
Electron cryomicroscopy of biological machines at subnanometer resolution.
Structure (London, England : 1993) Mar, 2005 | Pubmed ID: 15766537
The pore structure of the closed RyR1 channel.
Structure (London, England : 1993) Aug, 2005 | Pubmed ID: 16084392
A digital atlas to characterize the mouse brain transcriptome.
PLoS computational biology Sep, 2005 | Pubmed ID: 16184189
Fast rotational matching of single-particle images.
Journal of structural biology Nov, 2005 | Pubmed ID: 16236526
Common ancestry of herpesviruses and tailed DNA bacteriophages.
Journal of virology Dec, 2005 | Pubmed ID: 16282496
Structural analysis of the anaphase-promoting complex reveals multiple active sites and insights into polyubiquitylation.
Molecular cell Dec, 2005 | Pubmed ID: 16364911
Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus.
Nature Feb, 2006 | Pubmed ID: 16452981
Structural biology of cellular machines.
Trends in cell biology Mar, 2006 | Pubmed ID: 16459078
Refinement of protein structures by iterative comparative modeling and CryoEM density fitting.
Journal of molecular biology Apr, 2006 | Pubmed ID: 16490207
Close membrane-membrane proximity induced by Ca(2+)-dependent multivalent binding of synaptotagmin-1 to phospholipids.
Nature structural & molecular biology Mar, 2006 | Pubmed ID: 16491093
3D volume reconstruction of a mouse brain from histological sections using warp filtering.
Journal of neuroscience methods Sep, 2006 | Pubmed ID: 16580732
Hybrid segmentation framework for tissue images containing gene expression data.
Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention , 2005 | Pubmed ID: 16685853
Cryo-EM asymmetric reconstruction of bacteriophage P22 reveals organization of its DNA packaging and infecting machinery.
Structure (London, England : 1993) Jun, 2006 | Pubmed ID: 16730179
Automated segmentation of molecular subunits in electron cryomicroscopy density maps.
Journal of structural biology Dec, 2006 | Pubmed ID: 16908194
Outcome of a workshop on archiving structural models of biological macromolecules.
Structure (London, England : 1993) Aug, 2006 | Pubmed ID: 16955948
Cryoelectron microscopy of protein IX-modified adenoviruses suggests a new position for the C terminus of protein IX.
Journal of virology Dec, 2006 | Pubmed ID: 16987967
Structure of Halothiobacillus neapolitanus carboxysomes by cryo-electron tomography.
Journal of molecular biology Dec, 2006 | Pubmed ID: 17028023
Assessing the capabilities of a 4kx4k CCD camera for electron cryo-microscopy at 300kV.
Journal of structural biology Dec, 2006 | Pubmed ID: 17067819
Ab initio modeling of the herpesvirus VP26 core domain assessed by CryoEM density.
PLoS computational biology Oct, 2006 | Pubmed ID: 17069457
An expanded conformation of single-ring GroEL-GroES complex encapsulates an 86 kDa substrate.
Structure (London, England : 1993) Nov, 2006 | Pubmed ID: 17098196
Electron cryotomography reveals the portal in the herpesvirus capsid.
Journal of virology Feb, 2007 | Pubmed ID: 17151101
Identification of secondary structure elements in intermediate-resolution density maps.
Structure (London, England : 1993) Jan, 2007 | Pubmed ID: 17223528
Single-particle electron cryomicroscopy of the ion channels in the excitation-contraction coupling junction.
Methods in cell biology , 2007 | Pubmed ID: 17327167
Genome sequence, structural proteins, and capsid organization of the cyanophage Syn5: a "horned" bacteriophage of marine synechococcus.
Journal of molecular biology May, 2007 | Pubmed ID: 17383677
DNA packaging and delivery machines in tailed bacteriophages.
Current opinion in structural biology Apr, 2007 | Pubmed ID: 17395453
Essential function of the built-in lid in the allosteric regulation of eukaryotic and archaeal chaperonins.
Nature structural & molecular biology May, 2007 | Pubmed ID: 17460696
Learning-based segmentation framework for tissue images containing gene expression data.
IEEE transactions on medical imaging May, 2007 | Pubmed ID: 17518066
Cryoelectron microscopy of icosahedral virus particles.
Methods in molecular biology (Clifton, N.J.) , 2007 | Pubmed ID: 17656759
Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm.
Journal of structural biology Oct, 2007 | Pubmed ID: 17698370
Biophysical methods: structure, dynamics and gorgeous images.
Current opinion in structural biology Oct, 2007 | Pubmed ID: 17959374
Crystallographic conformers of actin in a biologically active bundle of filaments.
Journal of molecular biology Jan, 2008 | Pubmed ID: 18022194
Modular software platform for low-dose electron microscopy and tomography.
Journal of microscopy Dec, 2007 | Pubmed ID: 18045333
Protein structure fitting and refinement guided by cryo-EM density.
Structure (London, England : 1993) Feb, 2008 | Pubmed ID: 18275820
Backbone structure of the infectious epsilon15 virus capsid revealed by electron cryomicroscopy.
Nature Feb, 2008 | Pubmed ID: 18305544
De novo backbone trace of GroEL from single particle electron cryomicroscopy.
Structure (London, England : 1993) Mar, 2008 | Pubmed ID: 18334219
Computing a family of skeletons of volumetric models for shape description.
Computer aided design May, 2007 | Pubmed ID: 18449328
Achievable resolution from images of biological specimens acquired from a 4k x 4k CCD camera in a 300-kV electron cryomicroscope.
Journal of structural biology Jul, 2008 | Pubmed ID: 18514542
Mechanism of lid closure in the eukaryotic chaperonin TRiC/CCT.
Nature structural & molecular biology Jul, 2008 | Pubmed ID: 18536725
Remotely triggered liposome release by near-infrared light absorption via hollow gold nanoshells.
Journal of the American Chemical Society Jul, 2008 | Pubmed ID: 18543914
Location and flexibility of the unique C-terminal tail of Aquifex aeolicus co-chaperonin protein 10 as derived by cryo-electron microscopy and biophysical techniques.
Journal of molecular biology Sep, 2008 | Pubmed ID: 18588898
Subnanometer-resolution electron cryomicroscopy-based domain models for the cytoplasmic region of skeletal muscle RyR channel.
Proceedings of the National Academy of Sciences of the United States of America Jul, 2008 | Pubmed ID: 18621707
JADAS: a customizable automated data acquisition system and its application to ice-embedded single particles.
Journal of structural biology Jan, 2009 | Pubmed ID: 18926912
Interprotofilament interactions between Alzheimer's Abeta1-42 peptides in amyloid fibrils revealed by cryoEM.
Proceedings of the National Academy of Sciences of the United States of America Mar, 2009 | Pubmed ID: 19264960
Structural mechanism of SDS-induced enzyme activity of scorpion hemocyanin revealed by electron cryomicroscopy.
Structure (London, England : 1993) May, 2009 | Pubmed ID: 19446530
Refinement of protein structures into low-resolution density maps using rosetta.
Journal of molecular biology Sep, 2009 | Pubmed ID: 19596339
Automated pipeline for atlas-based annotation of gene expression patterns: application to postnatal day 7 mouse brain.
Methods (San Diego, Calif.) Feb, 2010 | Pubmed ID: 19698790
Radiation damage effects at four specimen temperatures from 4 to 100 K.
Journal of structural biology Mar, 2010 | Pubmed ID: 19903530
Model of human low-density lipoprotein and bound receptor based on cryoEM.
Proceedings of the National Academy of Sciences of the United States of America Jan, 2010 | Pubmed ID: 20080547
Mechanism of folding chamber closure in a group II chaperonin.
Nature Jan, 2010 | Pubmed ID: 20090755
4.0-A resolution cryo-EM structure of the mammalian chaperonin TRiC/CCT reveals its unique subunit arrangement.
Proceedings of the National Academy of Sciences of the United States of America Mar, 2010 | Pubmed ID: 20194787
Quantitative analysis of cryo-EM density map segmentation by watershed and scale-space filtering, and fitting of structures by alignment to regions.
Journal of structural biology Jun, 2010 | Pubmed ID: 20338243
Automated specimen search in cryo-TEM observation with DIFF-defocus imaging.
Journal of electron microscopy , 2010 | Pubmed ID: 20356853
Tracing conformational changes in proteins.
BMC structural biology , 2010 | Pubmed ID: 20487508
MOTIF-EM: an automated computational tool for identifying conserved regions in CryoEM structures.
Bioinformatics (Oxford, England) Jun, 2010 | Pubmed ID: 20529921
Structural changes in a marine podovirus associated with release of its genome into Prochlorococcus.
Nature structural & molecular biology Jul, 2010 | Pubmed ID: 20543830
Identifying Components in 3D Density Maps of Protein Nanomachines by Multi-scale Segmentation.
IEEE/NIH Life Science Systems and Applications Workshop. IEEE/NIH Life Science Systems and Applications Workshop Apr, 2009 | Pubmed ID: 20556220
A geometric database for gene expression data.
Symposium on geometry processing : [proceedings] / sponsored by the Eurographics Association in cooperation with ACM SIGGRAPH. Symposium on Geometry Processing , 2003 | Pubmed ID: 20631855
Zernike phase contrast cryo-electron microscopy and tomography for structure determination at nanometer and subnanometer resolutions.
Structure (London, England : 1993) Aug, 2010 | Pubmed ID: 20696391
Visualizing the structural changes of bacteriophage Epsilon15 and its Salmonella host during infection.
Journal of molecular biology Oct, 2010 | Pubmed ID: 20709082
Cryo-EM of macromolecular assemblies at near-atomic resolution.
Nature protocols Sep, 2010 | Pubmed ID: 20885381
Structure of a conserved retroviral RNA packaging element by NMR spectroscopy and cryo-electron tomography.
Journal of molecular biology Dec, 2010 | Pubmed ID: 20933521
EMDataBank.org: unified data resource for CryoEM.
Nucleic acids research Jan, 2011 | Pubmed ID: 20935055
Workshop on molecular animation.
Structure (London, England : 1993) Oct, 2010 | Pubmed ID: 20947014
The group II chaperonin Mm-Cpn binds and refolds human γD crystallin.
Protein science : a publication of the Protein Society Jan, 2011 | Pubmed ID: 20981710
Discrete structure of an RNA folding intermediate revealed by cryo-electron microscopy.
Journal of the American Chemical Society Nov, 2010 | Pubmed ID: 21038867
Workshop on the validation and modeling of electron cryo-microscopy structures of biological nanomachines.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing , 2011 | Pubmed ID: 21121065
Structural basis for scaffolding-mediated assembly and maturation of a dsDNA virus.
Proceedings of the National Academy of Sciences of the United States of America Jan, 2011 | Pubmed ID: 21220301
Dual action of ATP hydrolysis couples lid closure to substrate release into the group II chaperonin chamber.
Cell Jan, 2011 | Pubmed ID: 21241893
Modeling protein structure at near atomic resolutions with Gorgon.
Journal of structural biology May, 2011 | Pubmed ID: 21296162
Interbilayer-crosslinked multilamellar vesicles as synthetic vaccines for potent humoral and cellular immune responses.
Nature materials Mar, 2011 | Pubmed ID: 21336265
Partially polymerized liposomes: stable against leakage yet capable of instantaneous release for remote controlled drug delivery.
Nanotechnology Apr, 2011 | Pubmed ID: 21389566
Cryo-EM structure of a group II chaperonin in the prehydrolysis ATP-bound state leading to lid closure.
Structure (London, England : 1993) May, 2011 | Pubmed ID: 21565698
Practical performance evaluation of a 10k × 10k CCD for electron cryo-microscopy.
Journal of structural biology Sep, 2011 | Pubmed ID: 21619932
Structure of Trypanosoma brucei flagellum accounts for its bihelical motion.
Proceedings of the National Academy of Sciences of the United States of America Jul, 2011 | Pubmed ID: 21690369
The structure of barmah forest virus as revealed by cryo-electron microscopy at a 6-angstrom resolution has detailed transmembrane protein architecture and interactions.
Journal of virology Sep, 2011 | Pubmed ID: 21752915
Flexible architecture of IP3R1 by Cryo-EM.
Structure (London, England : 1993) Aug, 2011 | Pubmed ID: 21827954
4.4 Å cryo-EM structure of an enveloped alphavirus Venezuelan equine encephalitis virus.
The EMBO journal Sep, 2011 | Pubmed ID: 21829169
Near-atomic-resolution cryo-EM for molecular virology.
Current opinion in virology Aug, 2011 | Pubmed ID: 21845206
A Unique BSL-3 Cryo-Electron Microscopy Laboratory at UTMB.
Applied biosafety : journal of the American Biological Safety Association , 2010 | Pubmed ID: 21852942
Symmetry-free cryo-EM structures of the chaperonin TRiC along its ATPase-driven conformational cycle.
The EMBO journal Feb, 2012 | Pubmed ID: 22045336
Filamentous, mixed micelles of triblock copolymers enhance tumor localization of indocyanine green in a murine xenograft model.
Molecular pharmaceutics Jan, 2012 | Pubmed ID: 22118658
Direct electron detection yields cryo-EM reconstructions at resolutions beyond 3/4 Nyquist frequency.
Journal of structural biology Mar, 2012 | Pubmed ID: 22285189
Reconstructing virus structures from nanometer to near-atomic resolutions with cryo-electron microscopy and tomography.
Advances in experimental medicine and biology , 2012 | Pubmed ID: 22297510
Outcome of the first electron microscopy validation task force meeting.
Structure (London, England : 1993) Feb, 2012 | Pubmed ID: 22325770
Paraneoplastic thrombocytosis in ovarian cancer.
The New England journal of medicine Feb, 2012 | Pubmed ID: 22335738
Supramolecular non-amyloid intermediates in the early stages of α-synuclein aggregation.
Biophysical journal Mar, 2012 | Pubmed ID: 22404935
Constructing and validating initial Cα models from subnanometer resolution density maps with pathwalking.
Structure (London, England : 1993) Mar, 2012 | Pubmed ID: 22405004
An examination of the electrostatic interactions between the N-terminal tail of the Brome Mosaic Virus coat protein and encapsidated RNAs.
Journal of molecular biology Jun, 2012 | Pubmed ID: 22472420
The molecular architecture of the eukaryotic chaperonin TRiC/CCT.
Structure (London, England : 1993) May, 2012 | Pubmed ID: 22503819
The 2010 cryo-EM modeling challenge.
Biopolymers Sep, 2012 | Pubmed ID: 22696402
Gorgon and pathwalking: macromolecular modeling tools for subnanometer resolution density maps.
Biopolymers Sep, 2012 | Pubmed ID: 22696403
Comparison of Segger and other methods for segmentation and rigid-body docking of molecular components in cryo-EM density maps.
Biopolymers Sep, 2012 | Pubmed ID: 22696409
A tail-like assembly at the portal vertex in intact herpes simplex type-1 virions.
PLoS pathogens , 2012 | Pubmed ID: 23055933
Three-dimensional architecture of the rod sensory cilium and its disruption in retinal neurodegeneration.
Cell Nov, 2012 | Pubmed ID: 23178122
EMEN2: an object oriented database and electronic lab notebook.
Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada Feb, 2013 | Pubmed ID: 23360752
Cryo-EM structure of a molluscan hemocyanin suggests its allosteric mechanism.
Structure (London, England : 1993) Apr, 2013 | Pubmed ID: 23541894
Cryo-EM model validation using independent map reconstructions.
Protein science : a publication of the Protein Society Jun, 2013 | Pubmed ID: 23592445
Human CCT4 and CCT5 chaperonin subunits expressed in Escherichia coli form biologically active homo-oligomers.
The Journal of biological chemistry Jun, 2013 | Pubmed ID: 23612981
Validation of cryo-EM structure of IP₃R1 channel.
Structure (London, England : 1993) Jun, 2013 | Pubmed ID: 23707684
Visualizing GroEL/ES in the act of encapsulating a folding protein.
Cell Jun, 2013 | Pubmed ID: 23746846
Validated near-atomic resolution structure of bacteriophage epsilon15 derived from cryo-EM and modeling.
Proceedings of the National Academy of Sciences of the United States of America Jul, 2013 | Pubmed ID: 23840063
TRiC's tricks inhibit huntingtin aggregation.
eLife , 2013 | Pubmed ID: 23853712
Exploring new limits in complex biological structures.
Current opinion in structural biology Oct, 2013 | Pubmed ID: 24076042
Visualizing virus assembly intermediates inside marine cyanobacteria.
Nature Oct, 2013 | Pubmed ID: 24107993
Reprogramming an ATP-driven protein machine into a light-gated nanocage.
Nature nanotechnology Dec, 2013 | Pubmed ID: 24270642
Sarah H. Shahmoradian1,
Mauricio R. Galiano2,
Chengbiao Wu3,
Shurui Chen4,
Matthew N. Rasband2,
William C. Mobley3,
Wah Chiu4
1Department of Molecular Physiology and Biophysics, Baylor College of Medicine,
2Department of Neuroscience, Baylor College of Medicine,
3Department of Neuroscience, University of California at San Diego,
4National Center for Macromolecular Imaging, Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine
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