This study was financially supported by JSPS Grant-in-aid Scientific Research Program (No. 16H02580, 17H03885) and by Joint Research Program of Arid Land Research Center, Tottori University.

The main objective of this study was to use an array GPR system to visualize subsurface dynamic processes, such as water infiltration, it is also important to describe how the infiltration test was conducted.
1. Field Infiltration Test
<ol>
	<li>Select a site with a bare surface for the infiltration test. 
	Note: For this study, the infiltration test was conducted in a large greenhouse facility of the Arid Land Research Center of Tottori University, Japan. See the recent publication for more details16.</li>
	<li>Position on the surface six 2.5-m long porous tubes parallel at a distance of 15-cm between each other, so as to ensure uniform infiltration (Figure 2).</li>
	<li>Connect one end of the tubes to a valve regulated inlet, which is connected to a water reservoir or to a faucet, and the other end to an outlet in order to remove excess water.</li>
	<li>Place a thin 910 x 1802 mm2 wood panel (slightly larger than the antenna array), to cover the porous tubes.</li>
	<li>Check the effect of the wood panel on the radar signal prior to the infiltration test.</li>
	<li>Install soil moisture sensors right next to the wood panel to monitor changes in the soil moisture content at various depths. 
	Note: The purpose of these sensors is to provide reference data used to cross-check the results obtained from the analysis of the GPR data. In this study, a rod-type soil moisture sensor (see Table of Materials) was installed next to the antenna to monitor the soil dielectric constant at 10, 20, 30, 40, 60, and 100 cm depths.</li>
</ol>
2. GPR Measurement
<ol>
	<li>Place the array GPR antenna on the wood panel. 
	Note: In this study, the antenna was left stationary to ensure consistency in the recorded signals.</li>
	<li>Connect the antenna to the controller using coaxial cables.</li>
	<li>Connect the controller to a laptop PC with an Ethernet cable.</li>
	<li>Decide the antenna combinations and their sequence to ensure both common offset gather (COG) and multi-offset gather (MOG) are collected seamlessly. 
	Note: In this study, all the possible combinations for the array GPR at our disposal was used (110). It took less than 1.5 s to perform a full scan through all combinations.</li>
	<li>Start the recording of the GPR data using the data collection software. 
	Note: It is important to start the data acquisition before water is injected into the porous tubes.</li>
	<li>Open the valve to apply water (i.e., begin the infiltration process). 
	Note: The water injection rate in the subsoil can be determined from the hydraulic properties (e.g., hydraulic conductivity) of the target soil. The flow rate used in this study was 7,000 cm3/min, which was less than the saturated hydraulic conductivity of the dune sand.</li>
	<li>After a predetermined amount of water is injected, close the valve. 
	Note: Water was injected continuously for 4 h, and a total of 1,680 L of water were used for the test.</li>
	<li>Keep scanning with the array GPR for an additional period of time, in order to monitor the redistribution process for further analysis. 
	Note: The array GPR has been kept collecting data for 4 h after the valve had been closed. Nonetheless, these data have not been analyzed for the study presented here.</li>
</ol>
3. Data Analysis for Velocity Estimation
<ol>
	<li>Reconstruct COG and CMP data by extracting the relative Tx-Rx combinations from the overall data cube. This was achieved through some custom code developed by the authors which rearranged the radar profiles so to group together Tx-Rx pairs at identical offset (COG) and the ones with the same mid-point (CMP). 
	Note: Because a SFCW GPR unit was used for this study, the raw data is in the frequency domain; the operation of frequency to time conversion was performed using the software provided by the manufacturer of the GPR system.</li>
	<li>Estimate the optimum EM wave velocity in the wetting zone at a given elapsed time by fitting the computed two-way travel time, tc, of the EM wave reflected at the infiltration front to the observed signals. The velocity with the best curve fit was determined heuristically. 
	<img alt="Equation 1" src="/files/ftp_upload/56847/56847eq1.jpg" />&#160; &#160;&#160;(1) 
	where d0 is the depth to the reflection point, x is the distance between Tx and Rx, vr is the root-mean-square velocity to the reflection plane and t0 is the two-way travel time at zero offsets determined from the CMP radargram. 
	Note: The most common velocity estimation method using MOG is semblance analysis5,15,17. In semblance analysis, the root mean square velocity is picked using a velocity spectrum. Semblance analysis was not used for velocity estimation in this study because the low signal-to-noise ratio observed in the array GPR data did not allow us to develop a reliable velocity spectrum. Finding an appropriate filtering method to generate a reliable velocity spectrum from these data is being investigated in other ongoing research. For the scope of this study, the curve fitting method was used to fit Eq (1) to the CMP radargrams.</li>
	<li>Using Eq. (1), compute the wetting front depth d0 at a given elapsed time using the estimated EM velocity vr. 
	Note: For this part of the data analysis, the COG data set was used at an offset x equal to 113 mm.</li>
</ol>

<ol><li>Huisman, J., Hubbard, S., Redman, J. D., Annan, P. <a target="_blank" href="http://phineas.u-strasbg.fr/sailhac/liens/Cours/HGP/Articles2008/Huisman_VZJ_03_476.pdf">Measuring soil water content with ground penetrating radar: A review.</a> Vadose Zone Journal. 2 (4), 476-491 (2003).</li>
<li>Lambot, S., Weihermüller, L., Huisman, J., Vereecken, H., Vanclooster, M., Slob, E. C. <a target="_blank" href="http://onlinelibrary.wiley.com/doi/10.1029/2006WR005097/abstract">Analysis of air-launched ground-penetrating radar techniques to measure the soil surface water content.</a> Water Resources Research. 42, 1-12 (2006).</li>
<li>Binley, A., Hubbard, S., Huisman, J., Revil, A., Robinson, D., Singha, K., Slater, L. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/pubmed?term=((The+emergence+of+hydrogeophysics+for+improved+understanding+of+subsurface+processes+over+multiple+scales%5BTitle%5D)+AND+%22Water+Resources+Research%22%5BJournal%5D)">The emergence of hydrogeophysics for improved understanding of subsurface processes over multiple scales.</a> Water Resources Research. 51, 3837-3866 (2015).</li>
<li>Vereecken, H., Huisman, J., Hendricks, F. H., Bruggemann, N., Bogena, H., Kollet, S., Javaux, M., Van Der Kruk, J., Vanderborght, J. <a target="_blank" href="http://onlinelibrary.wiley.com/doi/10.1002/2014WR016852/full">Soil hydrology: Recent methodological advances, challenges, and perspectives.</a> Water Resources Research. 51, 2616-2633 (2015).</li>
<li>Forte, E., Pipan, M. <a target="_blank" href="https://www.sciencedirect.com/science/article/pii/S0165168416300494">Review of multi-offset GPR applications: Data acquisition, processing and analysis.</a> Signal Processing. 132, 1-11 (2017).</li>
<li>Vellidis, G., Smith, M. S., Thomas, D. L., Asmussen, L. E. <a target="_blank" href="https://www.cabdirect.org/cabdirect/abstract/19911960075">Detecting wetting front movement in a sandy soil with ground-penetrating radar.</a> Transactions of the ASAE. 33 (6), 1867-1874 (1990).</li>
<li>Trinks, I., Wachsmuth, D., Stumpel, H. <a target="_blank" href="https://www.researchgate.net/publication/261060806_Monitoring_water_flow_in_the_unsaturated_zone_using_georadar">Monitoring water flow in the unsaturated zone using georadar.</a> First Break. 19, 679-684 (2001).</li>
<li>Saintenoy, A., Schneider, S., Tucholka, P. <a target="_blank" href="https://hal.inria.fr/hal-00831408/document">Evaluating Ground Penetrating Radar Use for Water Infiltration Monitoring.</a> Vadose Zone Journal. 7 (1), 208-214 (2008).</li>
<li>Léger, E., Saintenoy, A., Coquet, Y. <a target="_blank" href="http://onlinelibrary.wiley.com/doi/10.1002/2013WR014226/abstract">Hydrodynamic parameters of a sandy soil determined by ground-penetrating radar inside a single ring infiltrometer.</a> Water Resources Research. 50 (7), 5459-5474 (2014).</li>
<li>Eide, E., Valand, P. A., Sala, J. <a target="_blank" href="http://ieeexplore.ieee.org/abstract/document/6970527/">Ground-coupled antenna array for step-frequency GPR.</a> Proceedings of 15th International Conference on Ground Penetrating Radar. , 785-790 (2014).</li>
<li>Eide, E., Hjelmstad, J. F. <a target="_blank" href="https://www.spiedigitallibrary.org/conference-proceedings-of-spie/4758/1/3D-utility-mapping-using-electronically-scanned-antenna-array/10.1117/12.462308.short?SSO=1">3D utility mapping using electronically scanned antenna array, Proceedings of GPR 2002.</a> Proceedings of Ninth International Conference on Ground Penetrating Radar. , 192-196 (2002).</li>
<li>Linford, N., Linford, P., Martin, L., Payne, A. <a target="_blank" href="http://onlinelibrary.wiley.com/doi/10.1002/arp.382/abstract">Stepped frequency ground penetrating radar survey with a multi-element array antenna: Results from field application on archaeological sites.</a> Archaeological Prospection. 17, 187-198 (2010).</li>
<li>Eide, E., Hjelmstad, J. F. <a target="_blank" href="http://docplayer.net/19654522-Uxo-and-landmine-detection-using-3-dimensional-ground-penetrating-radar-system-in-a-network-centric-environment.html">UXO and landmine detection using 3-dimensional ground penetrating radar system in a network centric environment.</a> Proceedings of ISTMP 2004. , (2004).</li>
<li>Sato, M., Hamada, Y., Feng, X., Kong, F. N., Zeng, Z., Fang, G. <a target="_blank" href="https://www.researchgate.net/publication/274770986_GPR_using_an_array_antenna_for_landmine_detection">GPR using an array antenna for landmine detection.</a> Near Surface Geophysics. 2 (1), 7-13 (2004).</li>
<li>Yi, L., Takahashi, K., Sato, M. <a target="_blank" href="http://ieeexplore.ieee.org/document/7325952/">Estimation of vertical velocity profile by multistatic GPR Yakumo.</a> Proceedings of 2015 IEEE International Geoscience and Remote Sensing Symposium (IGARSS). , 1060-1063 (2015).</li>
<li>Iwasaki, T., Kuroda, S., Saito, H., Tobe, Y., Suzuki, K., Fujimaki, H., Inoue, M. <a target="_blank" href="https://scisoc.confex.com/crops/2016am/webprogram/Paper100993.html">Monitoring infiltration process seamlessly using array ground penetrating radar.</a> Agricultural and Environmental Letters. 1, 160002(2016).</li>
<li>Booth, A. D., Clark, R., Murray, T. <a target="_blank" href="https://www.researchgate.net/publication/277484440_Semblance_response_to_a_ground-penetrating_radar_wavelet_and_resulting_errors_in_velocity_analysis">Semblance response to a ground-penetrating radar wavelet and resulting errors in velocity analysis.</a> Near Surface Geophysics. 8 (3), 235-246 (2010).</li>
<li>Saintenoy, A., Hopmans, J. W. <a target="_blank" href="http://ieeexplore.ieee.org/document/6072277/">Ground Penetrating Radar: Water Table Detection Sensitivity to Soil Water Retention Properties.</a> IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing. 4 (4), 748-753 (2011).</li>
</ol>

In this study, array ground penetrating radar (GPR) was used to track the depth of the wetting front during an infiltration experiment conducted at an experimental field near the Tottori Sand Dune, Japan. The array GPR system used in this study consists of 10 transmitting antennas (Tx) and 11 receiving antennas (Rx). The system can be configured to use up to 110 different Tx-Rx combinations. During the infiltration experiment, all 110 combinations were scanned continuously at 1.5 seconds intervals, leaving the array stationary at the location where water was applied through some porous tubes placed on the surface. Common-offset gather (COG) and common mid-point data (CMP) were reconstructed from the time-lapse data cube. It would be practically impossible to collect CMP data at the same rate with conventional bistatic GPR systems. It is very important to leave the antenna in stationary recording during the experiment in order to obtain reproducible and meaningful time-lapse data.
Although array GPR data have been used to estimate EM wave velocities15, there are only a few studies that analyzed time-lapse array GPR data to estimate EM wave velocities for transient processes like water infiltration. In this study, the electromagnetic (EM) wave velocity structure was estimated from the time-lapse CMP data. Instead of performing semblance analysis, the hyperbola curve for the two-way travel time was fitted heuristically to the reflected signals in the CMP radargrams in order to estimate the average EM wave velocity in the wetting zone because of low signal-to-noise (S/N) ratio in the data. When the S/N ratio is low, semblance analysis cannot be used to generate a reliable velocity spectrum. An appropriate filtering method would need to be developed for using the semblance analysis method. A rod-type soil moisture sensor was installed next to the GPR antenna to measure the changes in soil moisture content during the infiltration experiment; the sensors were displaced at the depths of 10, 20, 30, 40, and 60 cm and worked independently.
Using the estimated EM wave velocity, the depth of the wetting front was computed at 1-minute intervals of the infiltration process. The evolution in time of the estimated wetting front agrees well with the observations from the soil moisture sensors at depths below 20 cm. At shallower depths, the GPR estimate of the wetting front depth shows a discrepancy with the readings from the soil moisture sensors.
Overall, this study demonstrates that the array GPR system is capable of tracking the evolution of the wetting front depth during water infiltration into the soil, by collecting time-lapse common mid-point (CMP) data. As this type of data was not easily collected from conventional surface GPR before, the data obtained in this study are the very first ones that actually show how the wetting front evolved over time in the subsoil. Future work will explore the possibility of using data inversion to estimate the hydraulic parameters of the soil from the data obtained during this experiment.

Understanding mass and energy transport processes in the vadose zone are important for many applications in agricultural and environmental disciplines. Among those processes, variably saturated water flow is the essential process as many of the other processes, such as physical, geochemical, biological, and even mechanical processes, are usually coupled with water flow. Recent developments in geophysical techniques have allowed one to monitor hydrological processes in the vadose zone non-invasively. Among many geophysical techniques, ground penetrating radar (GPR) is one of the most widely used techniques to monitor and to characterize soil water dynamics because the propagation of electromagnetic (EM) waves emitted and received by GPR antennas is characterized by soil moisture content1,2,3,4. Among available systems, on-ground surface GPR (referred to as surface GPR in the remainder of the manuscript) is the most common to use in a field. Traditional surface GPR systems with one transmitter and one receiver (bistatic radar systems) are commonly used to scan the subsurface with a constant transmitter-receiver separation (offset). Data sets collected in this configuration are also known as common offset gathers (COG). Radar data are displayed as time series based on total travel time between the transmitter, eventual reflectors and back to the receiver. In order to convert the travel time to depth information, EM wave velocity in the subsurface needs to be estimated. For example, this can be done through the analysis of multi-offset gather (MOG) data sets5.
Although there have been a number of studies using GPR to monitor subsurface infiltration processes6,7,8,9, none of them determined directly the location of the wetting front or the EM wave velocity structure that is changing with time during infiltration. The common approach is to use objects buried at known depths as reference reflectors to determine average EM wave velocity and wetting front depth. Since the wetting front changes dynamically during infiltration, time-lapse MOG must be collected at short time intervals to exploit changes in the EM wave velocity structure without using reference objects. With common bistatic surface GPR antennas, the collection of time-lapse MOG at short intervals between each other is difficult or impossible as it requires to manually move antennas to set up the various offset configurations. Recently, a family of antenna array GPR (referred to as array GPR hereafter) has been used extensively to image the subsurface fast and accurately10. The basic concept of the array GPR is to provide dense swaths with a minimal effort by electronically switching multiple antennas mounted in a single frame. Array GPR systems have been mainly used to generate 3D subsurface images of wide areas quickly. Some examples of typical applications for these systems are road and bridge inspection11, archeological prospection12 and UXO and landmine detection13,14. For such purposes, the array GPR is mainly used to scan the subsurface with a constant antenna separation configuration to collect COG. Although it has been demonstrated that MOG collected with an array GPR could be used for velocity estimation15, the practical application of this methodology has been limited to just a few cases. By placing the antenna array at a fixed location, time-lapsed MOG can be easily collected. As demonstrated in our recent publication16, time-lapse radargrams collected with the array GPR system portray rather clearly the reflection signals from the wetting front as it gradually moves downwards during a vertical infiltration experiment carried out on a sand dune. The main objective of the paper was to demonstrate how to use the array GPR to collect time-lapse MOG during the infiltration test and how to analyze such data for tracking the depth of the wetting front.
In this study, we used an antenna array consisting of 10 transmitting (Tx0 - Tx9) and 11 receiving (Rx0 - Rx10) bow-tie monopole antennas. The displacement of the antenna elements within the array is shown in Figure 1 (see Table of Materials). The antenna array is controlled by a Step-Frequency Continuous Waveform (SFCW) radar unit operating over the frequency range from 100 MHz to 3,000 MHz. The array GPR switches through a user-defined sequence of Rx-Tx pairs using radio frequency (RF) multiplexers in the antenna array10. The maximum number of Tx-Rx combinations for this particular system is 110. For this experiment, we configured the array GPR to use all 110 combinations, programming the scan sequence so that each transmitter, from Tx0 to Tx9, was paired sequentially with all 11 receivers from Rx0 to Rx10. The time necessary to perform a scan through all 110 combinations is less than 1.5 seconds. The offset between transmitter and receiver was calculated based on the distance between the feed points of the antenna elements, where the vertical offset is 85 mm as shown in Figure 1.

<table><tbody><tr><td>GeoScope Radar Unit</td><td>3D Radar AS</td><td></td><td></td></tr><tr><td>DXG1820 antenna</td><td>3D Radar AS</td><td></td><td></td></tr><tr><td>PR2/6 Profile Probe&amp;nbsp;</td><td>Delta-T</td><td></td><td></td></tr></tbody></table>

tracking infiltration front depth using time-lapse multi-offset gathers collected with array antenna ground penetrating radar

A Ground Penetrating Radar (GPR) system based on a ground-coupled, densely populated antenna array was used to collect data during an infiltration experiment conducted at a test site near the Tottori Sand Dune, Japan. The antenna array used in this study consists of 10 transmitting antennas (Tx) and 11 receiving antennas (Rx). For this experiment, the system was configured to use all possible Tx-Rx pairings, resulting in a Multi-Offset Gather (MOG) consisting of 110 Tx-Rx combinations. The array was left stationary at a position directly above the infiltration area and data were collected every 1.5 seconds using a time-based trigger. Common-Offset Gather (COG) and Common Mid-Point (CMP) data cubes were reconstructed from the MOG data during post-processing. There have been few studies that used time-lapse CMP data to estimate changes in velocity of propagation. In this study, electromagnetic (EM) wave velocity was estimated heuristically at 1-minute intervals from the reconstructed CMP data through curve fitting, using the hyperbola equation. We then proceeded to calculate the depth of the wetting front. The evolution of the wetting front over time obtain through this method is consistent with the observations from a soil moisture sensor which was placed at a depth below 20 cm. The results obtained in this study demonstrate the ability of such array GPR system to monitor a subsurface dynamic process like water infiltration accurately and quantitatively.

Figure 3 shows a time-lapse panel diagram of 110 Tx-Rx combinations acquired every 1.5 s during the first 60 min of the infiltration experiment, after converting the data from frequency to time domain. In order to enhance reflections at depth, a bandpass filter was applied followed by gain compensation. The panel diagram can be divided into 10 sections, each section corresponding to a particular Tx. The location of the Tx is indicated by a white triangle, and each slice corresponds to a time-lapse signal recorded for an Rx. The vertical axis shows the two-way travel time or TWT, i.e. the time necessary for the EM wave to travel from the transmitter, to the eventual reflector and back to the receiver. The profiles display the signal amplitude in a grayscale color map. A large contrast in color indicates high amplitude in the recorded radar signal. EM wave reflections are produced at the interface between layers at different dielectric constant or by objects with different electrical characteristics than the surrounding medium; a high dielectric contrast will determine a high amplitude reflection. During the water infiltration process, there is a zone referred to as the transition zone where the water content gradually increases from the edge of the wetting zone, that is where water penetrates into the initially dry soil. The EM wave is likely to be reflected not at the very edge but within the transition zone, as observed in studies of water table detection18. In the remainder of the manuscript, this reflection area is referred to as the wetting front. In Figure 3, a high amplitude signal appears and moves steadily downwards as time advances during the experiment. This reflection is indeed produced by the wetting front as the water gradually penetrates downwards in the subsurface. From this diagram, COG and CMP can be reconstructed as shown in Figure 2 of Iwasaki et al.16
Velocity analysis was performed on the CMP data obtained every 1 min. For every set of CMP data, the two-way travel time given by Eq. (1) was fitted to the reflection from the wetting front by adjusting t0 and vr, assuming a uniform layer in the wet zone. Time zero was corrected by fitting the air wave with the velocity of 0.3 m/ns. Figure 4 shows CMP data at 5 min intervals from elapsed time te = 5 min to te = 50 min along with the best-fit curves displayed as white lines (solid lines for the reflected wave and dashed line for the air wave). Since the air wave is not a reflected wave but the direct signal between transmitter and receiver, the travel time increases linearly with the offset. All the curves were fitted to the positive peaks (in white color) of the reflected waves. All the curves fitted well to the observed reflected curves shown in the CMP radargrams at all offsets, which means that the estimated values for t0 and vr are good. For the infiltration experiment, a dry wood panel was placed between the antenna and the porous tubes. Because the panel has a much lower dielectric constant than that of wet soil, its effects on the EM wave propagation may be not negligible, even though it is thin. A two-layer model was then considered in addition to the aforementioned uniform layer model, assuming a value of 3 for the dielectric constant of the top 5 cm. Also for this second model, the EM wave velocity vr was estimated by curve fitting at the reflection produced by the wetting front.
In Figure 5, estimated wetting front depths are plotted as a function of te for both the single and two-layer models. It can be appreciated that the wetting front moves downwards almost linearly with time for both models, with the exception of a slow-down between te = 10 min and te = 20 min. Differences between two models are initially not significant, but as time elapses the estimate for the uniform model moves slightly faster compared to the two-layer model. In Figure 5, diamond symbols are used to mark the times when readings from the moisture sensors started to increase and when they later became steady; these are connected with a solid line for every sensor depth. As mentioned above, the reflection of the EM wave does not necessarily occur at the very edge of the wet zone; in other words, considering a certain depth, one cannot expect this reflection to be matching the point in time when the readings from a sensor start to increase. In this sense, the reflection is attributable to a depth level at the infiltration front where a certain water saturation has been reached, compared to the area immediately below. Considering the sensors at 30, 40, and 60 cm in depth, the estimate of the wetting front depth obtained from the GPR data falls well in the range shown by the solid lines on the timeline. The time when the GPR estimated wetting front arrived at 20 cm depth corresponds to the time when the sudden increase in the sensor reading was observed, while the GPR estimate reached the depth of 10 cm much faster than what was produced by the moisture sensor, although the reflection signal from the wetting front is clearly observed after te = 5 min (Figure 4). Also, it has to be mentioned that the extrapolation of the GPR estimated curve does not pass through the origin. Although it is not clear what caused this discrepancy at shallower depths, there may be a few possible explanations. It can be attributed to heterogeneity in soil properties, or it may be due to non-uniformity in water application. If that is indeed the case, this would have a greater effect earlier during the infiltration process than at a later stage. Another explanation could be that surface roughness affects the determination of time zero. In addition to the effect of the wood panel and the porous tubes, the effect of surface roughness should be taken into account.
<img alt="Figure 1" class="xfigimg" src="/files/ftp_upload/56847/56847fig1.jpg" /> 
Figure 1: Schema of array ground penetrating radar antenna configuration used in this study. V-shaped structures are bowtie monopole antennas. There are 10 transmitting antennas (Tx) and 11 receiving antennas (Rx) aligned horizontally. <a href="https://cloudflare.jove.com/files/ftp_upload/56847/56847fig1large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
<img alt="Figure 2" class="xfigimg" src="/files/ftp_upload/56847/56847fig2.jpg" /> 
Figure 2:&#160;Schemas of the infiltration experiment. (A) a top view and (B) a side view in which the array antenna was placed on top of six 250-cm porous tubes aligned 15 cm apart. <a href="https://cloudflare.jove.com/files/ftp_upload/56847/56847fig2large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
<img alt="Figure 3" class="xfigimg" src="/files/ftp_upload/56847/56847fig3.jpg" /> 
Figure 3: Time-lapse radargram obtained during the first 60 min of the infiltration experiment. Data consist of recorded signals for 110 antenna combinations. One slice corresponds to time-lapse data collected with a single Tx-Rx combination. A different color is used for signal amplitude. Vertical black lines separate data for each Tx. White triangles indicate the locations of Tx. <a href="https://cloudflare.jove.com/files/ftp_upload/56847/56847fig3large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
<img alt="Figure 4" class="xfigimg" src="/files/ftp_upload/56847/56847fig4.jpg" /> 
Figure 4: Radargrams of the CMP at te = 5 min to te = 55 min at 5 min intervals. The white solid lines represent manually fitted two-way travel time of the reflection from the wetting front, while the white dashed lines represent the travel time of the air wave. <a href="https://cloudflare.jove.com/files/ftp_upload/56847/56847fig4large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
<img alt="Figure 5" class="xfigimg" src="/files/ftp_upload/56847/56847fig5.jpg" /> 
Figure 5: Wetting front depths. Wetting front depths estimated from array GPR in time-lapse multi-offset gather as a function of the elapsed time both for the uniform (triangles) and the two-layer (square) models. Black lines with diamonds at both ends show the time between the initial increase in readings and when these reached a steady level for each sensor depth (i.e., the duration of transition zone). <a href="https://cloudflare.jove.com/files/ftp_upload/56847/56847fig5large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>

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Tracking Infiltration Front Depth Using Time-lapse Multi-offset Gathers Collected with Array Antenna Ground Penetrating Radar

Here we present a Ground Penetrating Radar (GPR) system based on a ground-coupled, densely populated antenna array for monitoring the dynamic process of subsurface water infiltration. A time-lapse radar image of the infiltration process allowed estimating the depth of the wetting front during the course of the infiltration process.

A Ground Penetrating Radar (GPR) system based on a ground-coupled, densely populated antenna array was used to collect data during an infiltration ...

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7.7K Views.  Tokyo University of Agriculture and Technology. Here we present a Ground Penetrating Radar (GPR) system based on a ground-coupled, densely populated antenna array for monitoring the dynamic process of subsurface water infiltration. A time-lapse radar image of the infiltration process allowed estimating the depth of the wetting front during the course of the infiltration process.

Video: Tracking Infiltration Front Depth Using Time-lapse Multi-offset Gathers Collected with Array Antenna Ground Penetrating Radar

Time Multiplexing Super Resolving Technique for Imaging from a Moving Platform

We propose a method for increasing the resolution of an object and overcoming the diffraction limit of an optical system installed on top of a moving imaging system, such as an airborne platform or satellite. The resolution improvement is obtained in a two-step process. First, three low resolution differently defocused images are being captured and the optical phase is retrieved using an improved iterative Gerchberg-Saxton based algorithm. The phase retrieval allows to numerically back propagate the field to the aperture plane. Second, the imaging system is shifted and the first step is repeated. The obtained optical fields at the aperture plane are combined and a synthetically increased lens aperture is generated along the direction of movement, yielding higher imaging resolution. The method resembles a well-known approach from the microwave regime called the Synthetic Aperture Radar (SAR) in which the antenna size is synthetically increased along the platform propagation direction. The proposed method is demonstrated through laboratory experiment.

A method for overcoming the optical diffraction limit is presented. The method includes a two-step process: optical phase retrieval using iterative Gerchberg-Saxton algorithm, and imaging system shifting followed by repetition of the first step. A synthetically increased lens aperture is generated along the direction of movement, yielding higher imaging resolution.

We propose a method for increasing the resolution of an object and overcoming the diffraction limit of an optical system installed on top of a moving ...

Engineering

Measuring and Mapping Patterns of Soil Erosion and Deposition Related to Soil Carbonate Concentrations Under Agricultural Management

Spatial patterns of soil erosion and deposition can be inferred from differences in ground elevation mapped at appropriate time increments. Such changes in elevation are related to changes in near-surface soil carbonate (CaCO3) profiles. The objective is to describe a simple conceptual model and detailed protocol for repeatable field and laboratory measurements of these quantities. Here, accurate elevation is measured using a ground-based differential global positioning system (GPS); other data acquisition methods could be applied to the same basic method. Soil samples are collected from prescribed depth intervals and analyzed in the lab using an efficient and precise modified pressure-calcimeter method for quantitative analysis of inorganic carbon concentration. Standard statistical methods are applied to point data, and representative results show significant correlations between changes in soil surface layer CaCO3 and changes in elevation consistent with the conceptual model; CaCO3 generally decreased in depositional areas and increased in erosional areas. Maps are derived from point measurements of elevation and soil CaCO3 to aid analyses. A map of erosional and depositional patterns at the study site, a rain-fed winter wheat field cropped in alternating wheat-fallow strips, shows the interacting effects of water and wind erosion affected by management and topography. Alternative sampling methods and depth intervals are discussed and recommended for future work relating soil erosion and deposition to soil CaCO3.

Spatial patterns of soil erosion and deposition can be inferred from differences in ground elevation mapped at appropriate time increments. Such changes in elevation are related to changes in near-surface soil carbonates. Repeatable methods for field and laboratory measurements of these quantities and data analysis methods are described here.

Spatial patterns of soil erosion and deposition can be inferred from differences in ground elevation mapped at appropriate time increments. Such changes ...

Ground-level Unmanned Aerial System Imagery Coupled with Spatially Balanced Sampling and Route Optimization to Monitor Rangeland Vegetation

Rangeland ecosystems cover 3.6 billion hectares globally with 239 million hectares located in the United States. These ecosystems are critical for maintaining global ecosystem services. Monitoring vegetation in these ecosystems is required to assess rangeland health, to gauge habitat suitability for wildlife and domestic livestock, to combat invasive weeds, and to elucidate temporal environmental changes. Although rangeland ecosystems cover vast areas, traditional monitoring techniques are often time-consuming and cost-inefficient, subject to high observer bias, and often lack adequate spatial information. Image-based vegetation monitoring is faster, produces permanent records (i.e., images), may result in reduced observer bias, and inherently includes adequate spatial information. Spatially balanced sampling designs are beneficial in monitoring natural resources. A protocol is presented for implementing a spatially balanced sampling design known as balanced acceptance sampling (BAS), with imagery acquired from ground-level cameras and unmanned aerial systems (UAS). A route optimization algorithm is used in addition to solve the &#8216;travelling salesperson problem&#8217; (TSP) to increase time and cost efficiency. While UAS images can be acquired 2&#8211;3x faster than handheld images, both types of images are similar to each other in terms of accuracy and precision. Lastly, the pros and cons of each method are discussed and examples of potential applications for these methods in other ecosystems are provided.

The protocol presented in this paper utilizes route optimization, balanced acceptance sampling, and ground-level and unmanned aircraft system (UAS) imagery to efficiently monitor vegetation in rangeland ecosystems. Results from images obtained from ground-level and UAS methods are compared.

Rangeland ecosystems cover 3.6 billion hectares globally with 239 million hectares located in the United States. These ecosystems are critical for ...

In Situ Soil Moisture Sensors in Undisturbed Soils

Soil moisture directly affects operational hydrology, food security, ecosystem services, and the climate system. However, the adoption of soil moisture data has been slow due to inconsistent data collection, poor standardization, and typically short record duration. Soil moisture, or quantitatively volumetric soil water content (SWC), is measured using buried, in situ sensors that infer SWC from an electromagnetic response. This signal can vary considerably with local site conditions such as clay content and mineralogy, soil salinity or bulk electrical conductivity, and soil temperature; each of these can have varying impacts depending on the sensor technology.
Furthermore, poor soil contact and sensor degradation can affect the quality of these readings over time. Unlike more traditional environmental sensors, there are no accepted standards, maintenance practices, or quality controls for SWC data. As such, SWC is a challenging measurement for many environmental monitoring networks to implement. Here, we attempt to establish a community-based standard of practice for in situ SWC sensors so that future research and applications have consistent guidance on site selection, sensor installation, data interpretation, and long-term maintenance of monitoring stations.
The videography focuses on a multi-agency consensus of best-practices and recommendations for the installation of in situ SWC sensors. This paper presents an overview of this protocol along with the various steps essential for high-quality and long-term SWC data collection. This protocol will be of use to scientists and engineers hoping to deploy a single station or an entire network.

In Situ Soil Moisture Sensors in Undisturbed Soils

The determination of soil water content is a critical mission requirement for many state and federal agencies. This protocol synthesizes multi-agency efforts to measure soil water content using buried in situ sensors.

Soil moisture directly affects operational hydrology, food security, ecosystem services, and the climate system. However, the adoption of soil moisture ...

Measuring the Structure, Composition, and Change of Underwater Environments with Large-area Imaging

Digital imaging and processing technology have evolved to facilitate the expansion of large-area imaging surveys, which increase our capacity to study the status, trends, and dynamics of organisms living in subtidal habitats. By creating photo-realistic digital twins for ex situ analyses, these approaches allow small field teams to collect substantially more data than was previously possible. Here we present a four-step, large-area imaging survey pipeline and analysis methodology, including image collection, model construction, ecological analysis, and data curation, that has been developed and refined through experimentation over the past decade. Each step described has a consistent focus on the unique value of the original source imagery. While types of data extracted from large-area image surveys are vast, we include here workflows to extract ecological data for structural complexity, community composition, and demographic analyses valuable for monitoring and hypothesis-driven efforts. We additionally include recommendations for metadata standards, which complement the collection of large-area imaging data and support archival efforts facilitating transparency and collaboration between research groups.

This protocol covers a four-step large-area imaging survey methodology used to extract metrics of structural complexity, community composition, and population demographics for coral reef communities. The quality of imagery collected and integrated access to the source imagery are prioritized within each step of the protocol.

Digital imaging and processing technology have evolved to facilitate the expansion of large-area imaging surveys, which increase our capacity to study the ...

Evaluation of an Exclusive Spur Dike U-Turn Design with Radar-Collected Data and Simulation

Traditional U-turn designs can improve operational features obviously, while U-turn diversions and merge segments still cause traffic congestion, conflicts, and delays. An exclusive spur dike U-turn lane design (ESUL) is proposed here to solve the disadvantages of traditional U-turn designs. To evaluate the operation performance of ESUL, a traffic simulation protocol is needed. The whole simulation process includes five steps: data collection, data analysis, simulation model build, simulation calibration, and sensitive analysis. Data collection and simulation model build are two critical steps and are described later in greater detail. Three indexes (travel time, delay, and number of stops) are commonly used in the evaluation, and other parameters can be measured from the simulation according to experimental needs. The results show that the ESUL significantly diminishes the disadvantages of traditional U-turn designs. The simulation can be applied to solve microscopic traffic problems, such as in single or several adjacent intersections or short segments. This method is not suitable for larger scale road networks or evaluations without data collection.

This protocol describes the process of solving a microscopic traffic problem with simulation. The whole process contains a detailed description of data collection, data analysis, simulation model build, simulation calibration, and sensitive analysis. Modifications and troubleshooting of the method are also discussed.

Traditional U-turn designs can improve operational features obviously, while U-turn diversions and merge segments still cause traffic congestion, ...

Simulating Imaging of Large Scale Radio Arrays on the Lunar Surface

In recent years there has been a renewed interest in returning to the Moon for reasons both scientific and exploratory in nature. The Moon provides the perfect training ground for building large scale bases that one may apply to other planets like Mars. The existence of a radio quiet zone on the lunar far side has promise for early universe studies and exoplanet searches, while the near side provides a stable base that may be used to observe low frequency emissions from Earth&#8217;s magnetosphere that may help gauge its response to incoming space weather. The construction of a large-scale radio array would provide large scientific returns as well as acting as a test of humanity&#8217;s ability to build structures on other planets. This work focuses on simulating the response of small to large-scale radio arrays on the Moon consisting of hundreds or thousands of antennas. The response of the array is dependent on the structure of the emission along with the configuration and sensitivity of the array. A set of locations are selected for the simulated radio receivers, using Digital Elevation Models from the Lunar Orbiter Laser Altimeter instrument on Lunar Reconnaissance Orbiter to characterize the elevation of the receiver locations. A custom Common Astronomy Software Applications code is described and used to process the data from the simulated receivers, aligning the lunar and sky coordinate frames using SPICE to ensure the proper projections are used for imaging. This simulation framework is useful for iterating array design for imaging any given scientific target in a small field of view. This framework does not currently support all sky imaging.

A simulation framework for testing the imaging capabilities of large-scale radio arrays on the lunar surface is presented. Major noise components are discussed, and a software pipeline is walked through with details on how to customize it for novel scientific uses.

In recent years there has been a renewed interest in returning to the Moon for reasons both scientific and exploratory in nature. The Moon provides the ...

Continuous-Wave Propagation Channel-Sounding Measurement System - Testing, Verification, and Measurements

Channel sounders are used to measure channel characteristics for radio systems. There are several types of channel sounders used today: continuous-wave (CW), direct pulse, frequency domain using a vector network analyzer (VNA), correlation-based, and swept-time delay cross-correlator. Each of these has unique advantages and disadvantages. CW systems have a larger dynamic range than other systems with a signal that can propagate further into the environment. As the audio sampling rates allow smaller file sizes than other systems, data collection can be continuous and last for several hours. This article discusses a CW-channel sounder system, which has been used to make numerous propagation loss measurements in various cities in the United States of America. Such propagation measurements should be accurate, reproducible, and free of artifacts or biases. This article shows how to set up the measurement, how to validate and verify that the system is making reliable measurements, and finally, it shows results from some of the measurement campaigns such as repeatability measurements, clutter loss measurements (where clutter loss is defined as the excess loss from free-space transmission loss), and reciprocity measurements.

This report describes the setup, validation and verification, and results from propagation measurements using a continuous-wave, radio frequency channel-sounding measurement system.

Channel sounders are used to measure channel characteristics for radio systems. There are several types of channel sounders used today: continuous-wave ...

A Protocol for Real-time 3D Single Particle Tracking

Real-time three-dimensional single particle tracking (RT-3D-SPT) has the potential to shed light on fast, 3D processes in cellular systems. Although various RT-3D-SPT methods have been put forward in recent years, tracking high speed 3D diffusing particles at low photon count rates remains a challenge. Moreover, RT-3D-SPT setups are generally complex and difficult to implement, limiting their widespread application to biological problems. This protocol presents a RT-3D-SPT system named 3D Dynamic Photon Localization Tracking (3D-DyPLoT), which can track particles with high diffusive speed (up to 20 &#181;m2/s) at low photon count rates (down to 10 kHz). 3D-DyPLoT employs a 2D electro-optic deflector (2D-EOD) and a tunable acoustic gradient (TAG) lens to drive a single focused laser spot dynamically in 3D. Combined with an optimized position estimation algorithm, 3D-DyPLoT can lock onto single particles with high tracking speed and high localization precision. Owing to the single excitation and single detection path layout, 3D-DyPLoT is robust and easy to set up. This protocol discusses how to build 3D-DyPLoT step by step. First, the optical layout is described. Next, the system is calibrated and optimized by raster scanning a 190 nm fluorescent bead with the piezoelectric nanopositioner. Finally, to demonstrate real-time 3D tracking ability, 110 nm fluorescent beads are tracked in water.

This protocol details the construction and operation of a real-time 3D single particle tracking microscope capable of tracking nanoscale fluorescent probes at high diffusive speeds and low photon count rates.

Real-time three-dimensional single particle tracking (RT-3D-SPT) has the potential to shed light on fast, 3D processes in cellular systems. Although ...

Bioengineering

Array Tomography Workflow for the Targeted Acquisition of Volume Information using Scanning Electron Microscopy

Electron microscopy is applied in biology and medicine for imaging of cellular and structural details at nanometer resolution. Historically, Transmission Electron Microscopy (TEM) provided insight into cell ultrastructure, but in the recent decade, the development of modern Scanning Electron Microscopes (SEM) has changed the way of looking inside the cells. Even though the resolution of TEM is superior when protein-level structural details are needed, SEM-resolution is sufficient for the majority of the organelle-level cell biology-related questions. The advancement in technology enabled automatic volume acquisition solutions such as Serial block-face imaging (SBF-SEM) and Focused ion beam SEM (FIB-SEM). Nevertheless, to this day, these methods remain inefficient when the identification and navigation to areas of interest are crucial. Without the means for precise localization of target areas before imaging, operators need to acquire much more data than they need (in SBF-SEM), or, even worse, prepare many grids and image them all (in TEM). We propose the strategy of "lateral screening" using Array Tomography in SEM, which facilitates the localization of areas of interest, followed by automated imaging of the relevant fraction of the total sample volume. Array tomography samples are conserved during imaging, and they can be arranged into section libraries ready for repeated imaging. Several examples are shown in which lateral screening enables us to analyze structural details that are incredibly challenging to access with any other method.

We describe the preparation of ribbons of serial sections and their collection on large transfer support for use as Array Tomography samples, along with automated imaging procedures in a scanning electron microscope. The protocol allows screening, retrieval, and targeted imaging of local, rare events, and the acquisition of large data volumes.

Electron microscopy is applied in biology and medicine for imaging of cellular and structural details at nanometer resolution. Historically, Transmission ...

Tracking Infiltration Front Depth Using Time-lapse Multi-offset Gathers Collected with Array Antenna Ground Penetrating Radar

Summary

Explore More Videos

Time Multiplexing Super Resolving Technique for Imaging from a Moving Platform

Measuring and Mapping Patterns of Soil Erosion and Deposition Related to Soil Carbonate Concentrations Under Agricultural Management

Ground-level Unmanned Aerial System Imagery Coupled with Spatially Balanced Sampling and Route Optimization to Monitor Rangeland Vegetation

In Situ Soil Moisture Sensors in Undisturbed Soils

Measuring the Structure, Composition, and Change of Underwater Environments with Large-area Imaging

Evaluation of an Exclusive Spur Dike U-Turn Design with Radar-Collected Data and Simulation

Simulating Imaging of Large Scale Radio Arrays on the Lunar Surface

Continuous-Wave Propagation Channel-Sounding Measurement System - Testing, Verification, and Measurements

A Protocol for Real-time 3D Single Particle Tracking

Array Tomography Workflow for the Targeted Acquisition of Volume Information using Scanning Electron Microscopy