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A Method for 3D Reconstruction and Virtual Reality Analysis of Glial and Neuronal Cells

DOI :

10.3791/59444-v

12:49 min

September 28th, 2019

September 28th, 2019

12,179 Views

1Biological and Environmental Sciences and Engineering Division, King Abdullah University of Science and Technology, 2Visual Computing Center, King Abdullah University of Science and Technology

The described pipeline is designed for the segmentation of electron microscopy datasets larger than gigabytes, to extract whole-cell morphologies. Once the cells are reconstructed in 3D, customized software designed around individual needs can be used to perform a qualitative and quantitative analysis directly in 3D, also using virtual reality to overcome view occlusion.

Tags

Keywords 3D Reconstruction

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