Name: the three-chamber choice behavioral task using zebrafish as a model system
Uploaded: 2021-04-14T15:00:00.000+00:00
Duration: 7 min 55 s
Description: Watch this Scientific Journal Video about The Three-Chamber Choice Behavioral Task using Zebrafish as a Model System at JoVE.com

We thank Sabrina Jones for her assistance adapting a rodent three-chamber choice paradigm to the zebrafish model and Jeremy Popowitz and Allison Murk for their help on behavior collection days, assistance with running trials, animal care, and tank set-up. Special thanks also to James M. Forbes (Mechanical Engineer) for his assistance with the 3-chamber choice tank design and construction.
Funding: VPC and TLD received a joint Faculty Research Support grant (FRSG) from American University College of Arts and Sciences. CJR received support from American University College of Arts and Sciences Graduate Student Support.

All experimental procedures were approved by the Institutional Animal Care and Use Committee (IACUC) at American University (protocol # 1606, 19-02).
1. Animals
<ol>
	<li>Animal rearing and maintenance
	<ol>
		<li>Obtain adult wild-type zebrafish (Danio rerio) aged 4&#8211;11 months as embryos and rear them in-house.</li>
		<li>Maintain the fish in an aquatic rack system at 28&#8211;29 &#176;C on a 14-h light:10-h dark photoperiod.</li>
		<li>Feed the fish twice per day with commercial flakes and supplement with live Artemia.</li>
		<li>Choose fish randomly from these stock tanks for behavioral experiments.</li>
	</ol>
	</li>
	<li>Upon experiment completion, anesthetize the animals by immersion in 0.02% tricaine for 2 min or until there is a lack of motor coordination and reduced respiration rate for later molecular and/or neurochemical analyses.</li>
</ol>
2. Three-chamber choice testing chamber
NOTE: This behavioral technique was modified from Ruhl et al.20.
<ol>
	<li>Chamber construction
	<ol>
		<li>Modify the behavioral chamber26&#8212;a 40 L aquarium (50 x 30 x 30 cm3)&#8212; to have a central or starting chamber (10 x 30 x 30 cm3), separated from two side choice chambers (each 20 x 30 x 30 cm3, Figure 1A).</li>
		<li>Construct the three compartments using an aluminum &#8220;U-shaped&#8221; channel affixed to the interior glass walls with aquarium sealant, to separate the tank into three chambers.</li>
		<li>Construct opaque dividers, 10 cm high, out of grey PVC sheet fit into the aluminum channels on either side. Make each divider out of 2 pieces, each equal in size: a stationary bottom piece permanently mounted within the tank and a moveable top piece that moves up and down in the aluminum tracks.</li>
		<li>Glue extra-large binder clips to the top of the grey PVC sheets to act as handles.</li>
		<li>Using a permanent marker, draw small horizontal lines 10 cm above the adhered grey PVC pipe on the outside of the tank. 
		NOTE: This mark is the point to which the top grey PVC sheet will be opened to allow access to either side.</li>
		<li>Add control (system) water to the tank to a level of 25 cm from bottom to top of the tank, or ~ 30 L. Place glass aquarium heaters into each section of the chamber for 24 h prior to testing to bring the temperature to 28.5 &#176;C. 
		NOTE: Remove the heaters at the start of the behavior session and perform a full water exchange after two days of use.</li>
	</ol>
	</li>
	<li>Discrimination setup
	<ol>
		<li>For each discrimination task, individually place colored felt pieces (beige, black, or white) on the outer back, side, and bottom of the choice chambers using Velcro (Figure 1B&#8211;D). 
		NOTE: The central chamber should have no background color associated with it.</li>
	</ol>
	</li>
	<li>As a reward, create a group of conspecifics (shoal) by placing 4 adult zebrafish, who will not otherwise be used in the study, in a small, clear tank in the far back corner of each choice chamber (Figure 1B&#8211;D). 
	NOTE: Choose shoal fish randomly from stock tanks each day, with at least one male and one female of the same age and size as the experimental fish in each shoal tank.</li>
</ol>
3. Behavioral tasks
<ol>
	<li>Acclimation 
	NOTE: Acclimation to the behavior chamber consists of three days of training; two days of group acclimation followed by one day of individual training.</li>
	<li>Group acclimation
	<ol>
		<li>Attach the beige (neutral) felt background to the outside of both choice compartments, and submerge a live shoal tank in each of the choice compartments (Figure 1B).</li>
		<li>Add five-six zebrafish to the center starting chamber with both sliding doors open, and allow the fish to roam freely for 30 min. 
		NOTE: The experimental zebrafish should be able to interact and socialize with these shoal fish through the tank as a reward after crossing into either choice compartment during acclimation. A fish is considered to have entered one of the side chambers when its entire body enters the chamber.</li>
		<li>Repeat this procedure with the same experimental fish for a second day (2 days of group acclimation). 
		NOTE: Do not keep the same groups of fish.</li>
	</ol>
	</li>
	<li>Individual acclimation
	<ol>
		<li>Chamber setup: Attach the beige (neutral) felt background to the outside of both choice compartments, and submerge a live shoal tank in both of the choice compartments, as in group acclimation (Figure 1B,E).
		<ol>
			<li>Place an individual zebrafish in the central starting chamber for 2 min with the sliding doors closed, and after the 2-min period, open both doors simultaneously.</li>
			<li>Make sure that each fish swims from the central chamber through a door for a total of 10 times, regardless of which side. Reward the fish each time it enters one of the side chambers (1 day of individual acclimation). 
			NOTE: If a fish is unable to complete this task 10 times within a 30-min period or refuses to leave the starting chamber at all, exclude it from the study.</li>
		</ol>
		</li>
		<li>Data acquisition: Record the number of times the fish swims into either side and the total time it takes to complete the task.</li>
	</ol>
	</li>
	<li>Acquisition 
	NOTE: After acclimation, zebrafish began a 3-day acquisition task.
	<ol>
		<li>Chamber setup: Attach a white felt piece to the outside of one choice compartment and a black felt piece to the outside of the other choice compartment (Figure 1C,F). 
		NOTE: Alternate the background color of each side daily using a pseudorandom schedule37.
		<ol>
			<li>For the duration of this phase of training, place a shoal-reward only placed in one of the choice compartments; this becomes the rewarded side.</li>
			<li>To begin acquisition, place a single experimental fish in the starting chamber for a 2-min period with the choice compartments closed off.</li>
			<li>After the 2-min acclimation, simultaneously open both doors, giving access to both choice compartments, and start the stopwatch to assess the choice latency.</li>
			<li>Using a biased design, randomly assign the fish either a black or white preference (i.e., either W+/B- or B+/W-), meaning that the shoal is placed in either the black (B+) or white (W+) choice compartment.</li>
		</ol>
		</li>
		<li>Denoting the choice response
		<ol>
			<li>Once the fish makes a choice by entering one of the side compartments, stop the timer.</li>
			<li>If the fish correctly chooses the preferred side, immediately close the door between the central chamber and that side to restrict the fish to the preferred side for 1 min, and allow it to be rewarded by interacting with the shoal tank (Figure 1C,F). Score this trial as &#8220;C&#8221; for &#8220;Correct&#8221; (rewarded).</li>
			<li>If the fish swims through the incorrect door, transfer it back to the central chamber, close both doors, and score the trial as &#8220;I&#8221; for &#8220;incorrect&#8221; (non-rewarded).</li>
			<li>If the fish does not make a decision within 2 min after the doors are opened, move the fish to the correct side for 1 min, and score the trial as &#8220;M&#8221; for &#8220;marked&#8221; (force-rewarded).</li>
			<li>When transferring/moving fish back into the starting chamber, gently guide the fish into the central chamber using a fish net as a shepherding tool. 
			NOTE: Do not scoop the fish out of the water and replace it into the starting chamber as this could affect the behavioral assay.</li>
			<li>Once the fish returns to the central chamber, wait for 1 min before performing the task again. Ensure that each fish performs the task 8 times.</li>
		</ol>
		</li>
		<li>Data acquisition
		<ol>
			<li>For each experimental fish, record the time to first decision (or choice latency) and the individual scores (C, I, or M) for each of the 8 acquisition trials (section 3.4.2) in order.</li>
			<li>Report the results for these experiments were reported as group averages for each trial on each acquisition day.</li>
			<li>Once a fish has completed a trial, categorize it as either a &#8220;high performing&#8221; fish or a &#8220;low performing&#8221; fish. 
			NOTE: A fish was considered &#8220;high performing&#8221; if it successful chose the correct side of the tank in at least 6 of the 8 total trials for the day. Any fish that does not meet this criterion is a &#8220;low performer&#8221;.</li>
			<li>Once identified, house high performing and low performing fish separately.</li>
			<li>Categorize the fish as &#8220;high&#8221; or &#8220;low&#8221; performers on each of the three days of acquisition, after a fish has completed the trials. 
			NOTE: At the end of the third day of acquisition, fish remain as either &#8220;high&#8221; or &#8220;low&#8221; performers for the duration of the study. 
			NOTE: Some fish that were initially in the &#8216;low performing&#8217; group learn the task on acquisition day 2 or 3. When this happens, the initial &#8216;low performing&#8217; fish may be moved into the &#8216;high performing&#8217; group. Do not move the fish between groups in this manner after day 3 (the end of acquisition).</li>
		</ol>
		</li>
	</ol>
	</li>
</ol>
4. Experimental treatment
<ol>
	<li>After the acquisition period, when the fish demonstrate the ability to solve a simple discrimination task between the black and white background, start the treatment regimen for the experimental zebrafish. 
	NOTE: To show the applicability of this method, this study shows two experimental designs:
	<ol>
		<li>Longitudinal study
		<ol>
			<li>Return the experimental fish to their holding tanks for 8 weeks. Maintain the fish in standard tanks with daily water changes, and feed them twice daily. 
			NOTE: Do not conduct any behavioral training during these 8 weeks in the holding tanks.</li>
			<li>Perform reversal assessment after this period to assess whether the zebrafish can solve the reversal task after 8 weeks without training.</li>
		</ol>
		</li>
		<li>Hyperglycemia: Expose the experimental groups to water (handling stress control), mannitol (1%&#8211;3%, osmotic control), or glucose (1%&#8211;3%) for 4 or 8 weeks22,23. 
		NOTE: Do not conduct any behavioral training during these 4 or 8 weeks.</li>
	</ol>
	</li>
</ol>
5. Reversal
NOTE: Following experimental manipulation (as in section 4.2), the fish are tested in the final part of the 3-chamber choice paradigm&#8212;reversal. To do this, the rewarded side is reversed (compared to acquisition) such that fish previously rewarded with a shoal on the white side are now rewarded with a shoal on the black side and vice versa. In this way, reversal assesses whether the fish have learned where the reward (shoal) is located, irrespective of the color of the background.
<ol>
	<li>Chamber setup
	<ol>
		<li>Attach black felt to the outside of one of the choice chambers and white felt to the outside of the other, making sure that the black and white sides are the same sides as in the acquisition trials (section 3.4).</li>
		<li>Submerge the shoal tank in the far back corner of the side that is the opposite of the previously rewarded choice chamber (Figure 1D,G). 
		NOTE: In other words, fish previously rewarded on the white side are now rewarded on the black side and vice versa.</li>
		<li>Test the fish individually as in section 3.5. Begin by placing a single experimental fish in the starting chamber for a 2-min period, and close off access to the choice compartments.</li>
		<li>Simultaneously open both sides of the chamber. 
		NOTE: Complete a total of 8 trials each day for three consecutive treatment days.</li>
	</ol>
	</li>
	<li>Denoting the choice response
	<ol>
		<li>If the fish correctly chooses the preferred color, immediately close the door to the central chamber for 1 min, allowing the fish to interact with the shoal reward. Score this trial as &#8220;C&#8221; for &#8220;Correct&#8221; (rewarded).</li>
		<li>If the fish swims through the incorrect door, transfer it back into the central chamber, close both doors, and score this trial as &#8220;I&#8221; for &#8220;incorrect&#8221; (non-rewarded).</li>
		<li>If the fish does not make a decision within 2 min after the doors are opened, move the fish to the correct side, and score the trial as &#8220;M&#8221; for &#8220;marked&#8221; (force-rewarded).</li>
	</ol>
	</li>
	<li>Data acquisition
	<ol>
		<li>For each experimental zebrafish, record the choice latency and the individual scores (C, I, M), in order, for each trial.</li>
		<li>Report the results for these experiments as group averages for each two-trial block on each of the 3 reversal days.</li>
		<li>Keep the data for high and low performing fish separate to determine whether they display the same level of performance during reversal as they did during acquisition.</li>
	</ol>
	</li>
</ol>

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The authors have nothing to disclose.

Although there has been tremendous growth in the amount and variety of neuroscience research performed using zebrafish in the past 15 years24, behavioral assays are lacking in this species compared to mammalian model systems11,25,26. Here, we show that a three-chamber choice task developed for use with rodents can be adapted to assess the acquisition and reversal of a visual discrimination learning in zeb...

Neurodegenerative diseases are age-dependent, debilitating, and incurable. These diseases are increasing in prevalence, resulting in an urgent need to improve upon and develop new therapeutic strategies. The onset and presentation of each disease is unique, as some affect language, motor, and autonomic brain regions, while others cause learning deficits and memory loss1. Most notably, cognitive deficits and/or impairment are the most prevalent complications across all neurodegenerative diseases2. In hopes of shedding light on the underlying mechanisms involved in these neurodegenerative diseases, the use of many different model systems (including single-celled organisms to Drosophila to higher-order vertebrates such as rodents and humans) have been employed; however, the majority of neurodegenerative diseases remain incurable.
Learning and memory are highly conserved processes among organisms as constant changes to the environment require adaptation3. Impairment in both cognition and synaptic plasticity has been demonstrated in several rodent models. Specifically, well-established behavioral assays use associative learning to assess cognitive changes following various impairment-induced diseases and disorders4. Additionally, contrast discrimination reversal assesses cognitive deficits because it involves higher-order learning and memory functions, and reversal depends on inhibition of a previously learned association. The widely used three-chamber choice task elucidates possible deficits in learning and memory pathways of the central nervous system5,6. Recently, this field has expanded to include non-mammalian models, such as zebrafish (Danio rerio), as several paradigms have been developed for a range of ages from larvae to adults7,8.
Zebrafish provide a balance of complexity and simplicity that is advantageous for the assessment of cognitive impairments with behavioral techniques. First, zebrafish are amenable to high-throughput behavioral screening given their small size and prolific reproductive nature. Second, zebrafish possess a structure, the lateral pallium, which is analogous to the mammalian hippocampus as it has similar neuronal markers and cell types7. Zebrafish are also able to acquire and remember spatial information9 and, like humans, are diurnal10. Therefore, it is not surprising that zebrafish are being used as a model for neurodegenerative diseases with increasing frequency. However, the absence of appropriate behavioral assays has made it difficult to apply the zebrafish model for cognitive assessments. Published work using zebrafish-specific behavioral assays include associative learning tasks11, anxiety behavior12, memory13, object recognition14, and conditioned-place-preference15,16,17,18,19. Though there have been many developments with respect to zebrafish behavioral assays, counterparts for some tests of cognitive functions in rodents have yet to be developed for use with zebrafish18.
Building on previous studies from our lab, we modeled/developed a cognitive task in zebrafish based on the three-chamber choice task used with rodents using social interaction as a reward. Additionally, we expanded upon the associative learning aspect of the behavioral task and incorporated contrast discrimination reversal in hopes of further developing this behavioral task to assess cognitive impairment. This enabled us to examine both the initial acquisition of discrimination learning and the subsequent inhibition of that learning in the reversal phase. In the current study, we demonstrate that this procedure provided a reliable method for assessing cognitive functioning in zebrafish following glucose immersion for 4 or 8 weeks.

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the three-chamber choice behavioral task using zebrafish as a model system

Neurodegenerative diseases are age-dependent, debilitating, and incurable. Recent reports have also correlated hyperglycemia with changes in memory and/or cognitive impairment. We have modified and developed a three-chamber choice cognitive task similar to that used with rodents for use with hyperglycemic zebrafish. The testing chamber consists of a centrally located starting chamber and two choice compartments on either side, with a shoal of conspecifics used as the reward. We provide data showing that once acquired, zebrafish remember the task at least 8 weeks later. Our data indicate that zebrafish respond robustly to this reward, and we have identified cognitive deficits in hyperglycemic fish after 4 weeks of treatment. This behavioral assay may also be applicable to other studies related to cognition and memory.

Acclimation to the behavior chamber involves three days of training: 2 days of group acclimation followed by 1 day of individual acclimation. However, because we could not distinguish individual zebrafish from one another, we were only able to collect data during individual acclimation. At this time, experimental animals (n = 30), conditioned using a shoal-based reward, took an average of 125.11 s to reach their first decision (Figure 2A) and an average of 725.34 s (12 min) to complete the e...

Watch this Scientific Journal Video about The Three-Chamber Choice Behavioral Task using Zebrafish as a Model System at JoVE.com

The Three-Chamber Choice Behavioral Task using Zebrafish as a Model System

We present a behavioral chamber designed to assess cognitive performance. We provide data showing that once acquired, zebrafish remember the task 8 weeks later. We also show that hyperglycemic zebrafish have altered cognitive performance, indicating that this paradigm is applicable to studies assessing cognition and memory.

Neurodegenerative diseases are age-dependent, debilitating, and incurable. Recent reports have also correlated hyperglycemia with changes in memory and/or ...

the-three-chamber-choice-behavioral-task-using-zebrafish-as-model

Research

JoVE Journal

Behavior

3.7K Views.  American University. We present a behavioral chamber designed to assess cognitive performance. We provide data showing that once acquired, zebrafish remember the task 8 weeks later. We also show that hyperglycemic zebrafish have altered cognitive performance, indicating that this paradigm is applicable to studies assessing cognition and memory.

Video: The Three-Chamber Choice Behavioral Task using Zebrafish as a Model System

Behavioral Approaches to Studying Innate Stress in Zebrafish

Responding appropriately to stressful stimuli is essential for survival of an organism. Extensive research has been done on a wide spectrum of stress-related diseases and psychiatric disorders, yet further studies into the genetic and neuronal regulation of stress are still required to develop better therapeutics. The zebrafish provides a powerful genetic model to investigate the neural underpinnings of stress, as there exists a large collection of mutant and transgenic lines. Moreover, pharmacology can easily be applied to zebrafish, as most drugs can be added directly to water. We describe here the use of the 'novel tank test' as a method to study innate stress responses in zebrafish, and demonstrate how potential anxiolytic drugs can be validated using the assay. The method can easily be coupled with zebrafish lines harboring genetic mutations, or those in which transgenic approaches for manipulating precise neural circuits are used. The assay can also be used in other fish models. Together, the described protocol should facilitate the adoption of this simple assay to other laboratories.

This manuscript describes a simple method to measure stress behaviorally in adult zebrafish. The approach takes advantage of the innate tendency that zebrafish prefer the bottom half of a tank when in a stressful state. We also describe methods for coupling the assay with pharmacology.

Responding appropriately to stressful stimuli is essential for survival of an organism. Extensive research has been done on a wide spectrum of ...

Automated High-throughput Behavioral Analyses in Zebrafish Larvae

We have created a novel high-throughput imaging system for the analysis of behavior in 7-day-old zebrafish larvae in multi-lane plates. This system measures spontaneous behaviors and the response to an aversive stimulus, which is shown to the larvae via a PowerPoint presentation. The recorded images are analyzed with an ImageJ macro, which automatically splits the color channels, subtracts the background, and applies a threshold to identify individual larvae placement in the lanes. We can then import the coordinates into an Excel sheet to quantify swim speed, preference for edge or side of the lane, resting behavior, thigmotaxis, distance between larvae, and avoidance behavior. Subtle changes in behavior are easily detected using our system, making it useful for behavioral analyses after exposure to environmental toxicants or pharmaceuticals.

Our laboratory developed a novel high-throughput automated imaging system that is useful for the detection of several different behaviors in 7-day-old zebrafish larvae. The system can be used for detecting subtle changes in behavior after the larvae have been exposed to environmental toxicants or pharmaceuticals.

We have created a novel high-throughput imaging system for the analysis of behavior in 7-day-old zebrafish larvae in multi-lane plates. This system ...

Neuroscience

A Standardized Protocol for Preference Testing to Assess Fish Welfare

Animal welfare assessment techniques try to take into consideration the specific needs and wants of the animal in question. Providing enrichment (the addition of physical objects or conspecifics in the housing environment) is often a way to give captive animals the opportunity to choose who or what they interact with and how they spend their time. A fundamental component of the aquatic environment that is often overlooked in captivity, however, is the ability for the animal to choose to engage in physical exercise. For many animals, including fish, exercise is an important aspect of their life history, and is known to have many health benefits, including positive changes in the brain and behavior. Here we present a method for assessing habitat preferences in captive animals. The protocol could easily be adapted to look at a variety of environmental factors (e.g., gravel versus sand as a substrate, plastic plants versus live plants, low flow versus high flow of water) in different aquatic species, or for use with terrestrial species. Statistical assessment of preference is carried out using Jacob&#39;s preference index, which ranks the habitats from -1 (avoidance) to +1 (most preferred). With this information, it can be determined what the animal wants from a welfare perspective, including their preferred location.

A fundamental aspect of assessing the welfare of animals in captivity is to ask whether the animals have what they want. Here, we present a protocol to determine housing preference in the zebrafish (Danio rerio) with respect to the presence/absence of environmental enrichment and access to flowing of water.

Animal welfare assessment techniques try to take into consideration the specific needs and wants of the animal in question. Providing enrichment (the ...

A Novel Method of Drug Administration to Multiple Zebrafish (Danio rerio) and the Quantification of Withdrawal

Anxiety testing in zebrafish is often studied in combination with the application of pharmacological substances. In these studies, fish are routinely netted and transported between home aquaria and dosing tanks. In order to enhance the ease of compound administration, a novel method for transferring fish between tanks for drug administration was developed. Inserts that are designed for spawning were used to transfer groups of fish into the drug solution, allowing accurate dosing of all fish in the group. This increases the precision and efficiency of dosing, which becomes very important in long schedules of repeated drug administration. We implemented this procedure for use in a study examining the behavior of zebrafish in the light/dark test after administering ethanol with differing 21 day schedules. In fish exposed to daily-moderate amounts of alcohol there was a significant difference in location preference after 2 days of withdrawal when compared to the control group. However, a significant difference in location preference in a group exposed to weekly-binge administration was not observed. 
This protocol can be generalized for use with all types of compounds that are water-soluble and may be used in any situation when the behavior of fish during or after long schedules of drug administration is being examined. The light/dark test is also a valuable method of assessing withdrawal-induced changes in anxiety.

A Novel Method of Drug Administration to Multiple Zebrafish Danio rerio and the Quantification of Withdrawal

A novel method for reducing variability when exposing fish to drugs is explained. Fish exposed to various patterns of ethanol exposure were found to have altered anxiety levels during withdrawal in a light/dark scototaxic assay.

Anxiety testing in zebrafish is often studied in combination with the application of pharmacological substances. In these studies, fish are routinely ...

Modeling Fetal Alcohol Spectrum Disorders in Zebrafish to Characterize the Impact of an Adverse Embryonic Environment on Adult Social Behavior

Fetal alcohol spectrum disorders (FASD) describe all alcohol-induced birth defects. Birth defects such as growth deficiencies, craniofacial, behavioral, and cognitive abnormalities are associated with FASD. Social difficulties are common behavioral abnormalities associated with FASD and often result in serious health issues. Animal models are critical to understanding the mechanisms responsible for ethanol-induced social defects. Zebrafish are social vertebrates that produce externally fertilized transparent eggs; these characteristics provide researchers with a precise yet simple procedure for creating the FASD phenotype and an innate behavior that can be leveraged to model the social deficits associated with FASD. Thus, zebrafish are ideal for characterizing the social deficits of FASD. The goal of the current protocol is to provide the user with a simple behavioral assay that can be used to characterize the consequences of a negative environment early during development and the effects it can have on social behavior in adulthood. The protocol can be used to characterize the effect mutations or teratogens have on adult social behavior. The protocol outlined here demonstrates how to characterize the social behavior of individual fish during a 20-min social assay. Furthermore, the data obtained using the current protocol provides evidence that the protocol can be used to characterize the effects of embryonic ethanol-induced social defects in adult zebrafish.

The goal of the current protocol is to outline the steps necessary to establish and use a social preference assay for adult zebrafish and demonstrate that it can be used to characterize ethanol-induced social defects.

Fetal alcohol spectrum disorders (FASD) describe all alcohol-induced birth defects. Birth defects such as growth deficiencies, craniofacial, behavioral, ...

Boldness, Aggression, and Shoaling Assays for Zebrafish Behavioral Syndromes

A behavioral syndrome exists when specific behaviors interact under different contexts. Zebrafish have been test subjects in recent studies and it is important to standardize protocols to ensure proper analyses and interpretations. In our previous studies, we have measured boldness by monitoring a series of behaviors (time near surface, latency in transitions, number of transitions, and darts) in a 1.5 L trapezoidal tank. Likewise, we quantified aggression by observing bites, lateral displays, darts, and time near an inclined mirror in a rectangular 19 L tank. By dividing a 76 L tank into thirds, we also examined shoaling preferences. The shoaling assay is a highly customizable assay and can be tailored for specific hypotheses. However, protocols for this assay also must be standardized, yet flexible enough for customization. In previous studies, end chambers were either empty, contained 5 or 10 zebrafish, or 5 pearl danios (D. albolineatus). In the following manuscript, we present a detailed protocol and representative data that accompany successful applications of the protocol, which will allow for replication of behavioral syndrome experiments.

This manuscript describes the setup, implementation, and analysis of boldness, aggression, and shoaling in zebrafish and testing for the presence of a behavioral syndrome. A standardized approach for behavioral quantification will allow for easier comparison across studies. Modifications to this protocol are possible as each assay can be run individually.

A behavioral syndrome exists when specific behaviors interact under different contexts. Zebrafish have been test subjects in recent studies and it is ...

Medicine

Using an Automated 3D-tracking System to Record Individual and Shoals of Adult Zebrafish

Like many aquatic animals, zebrafish (Danio rerio) moves in a 3D space. It is thus preferable to use a 3D recording system to study its behavior. The presented automatic video tracking system accomplishes this by using a mirror system and a calibration procedure that corrects for the considerable error introduced by the transition of light from water to air. With this system it is possible to record both single and groups of adult zebrafish. Before use, the system has to be calibrated. The system consists of three modules: Recording, Path Reconstruction, and Data Processing. The step-by-step protocols for calibration and using the three modules are presented. Depending on the experimental setup, the system can be used for testing neophobia, white aversion, social cohesion, motor impairments, novel object exploration etc. It is especially promising as a first-step tool to study the effects of drugs or mutations on basic behavioral patterns. The system provides information about vertical and horizontal distribution of the zebrafish, about the xyz-components of kinematic parameters (such as locomotion, velocity, acceleration, and turning angle) and it provides the data necessary to calculate parameters for social cohesions when testing shoals.

The use of a 3D automatic video system that can track individual and groups of zebrafish is described. As application example we explore the effects of the NMDA-receptor antagonist MK-801 on shoals of zebrafish.

Like many aquatic animals, zebrafish (Danio rerio) moves in a 3D space. It is thus preferable to use a 3D recording system to study its behavior. The ...

Biology

In Vivo Whole-Brain Imaging of Zebrafish Larvae

In Vivo Whole-Brain Imaging of Zebrafish Larvae Using Three-Dimensional Fluorescence Microscopy

As a vertebrate model animal, larval zebrafish are widely used in neuroscience and provide a unique opportunity to monitor whole-brain activity at the cellular resolution. Here, we provide an optimized protocol for performing whole-brain imaging of larval zebrafish using three-dimensional fluorescence microscopy, including sample preparation and immobilization, sample embedding, image acquisition, and visualization after imaging. The current protocol enables in vivo imaging of the structure and neuronal activity of a larval zebrafish brain at a cellular resolution for over 1 h using confocal microscopy and custom-designed fluorescence microscopy. The critical steps in the protocol are also discussed, including sample mounting and positioning, preventing bubble formation and dust in the agarose gel, and avoiding motion in images caused by incomplete solidification of the agarose gel and paralyzation of the fish. The protocol has been validated and confirmed in multiple settings. This protocol can be easily adapted for imaging other organs of a larval zebrafish.

Author Spotlight: In Vivo Whole-Brain Imaging of Zebrafish Larvae Using Three-Dimensional Fluorescence Microscopy  

Presented here is a protocol for in vivo whole-brain imaging of larval zebrafish using three-dimensional fluorescence microscopy. The experimental procedure includes sample preparation, image acquisition, and visualization.

As a vertebrate model animal, larval zebrafish are widely used in neuroscience and provide a unique opportunity to monitor whole-brain activity at the ...

Behavior Tracking and Neural Activity Pattern in the Zebrafish Forebrain

Two-Photon Calcium Imaging of Forebrain Activity in Behaving Adult Zebrafish

Adult zebrafish (Danio rerio) exhibit a rich repertoire of behaviors for studying cognitive functions. They also have a miniature brain that can be used for measuring activities across brain regions through optical imaging methods. However, reports on the recording of brain activity in behaving adult zebrafish have been scarce. The present study describes procedures to perform two-photon calcium imaging in the dorsal forebrain of adult zebrafish. We focus on steps to restrain adult zebrafish from moving their heads, which provides stability that enables laser scanning imaging of the brain activity. The head-restrained animals can freely move their body parts and breathe without aids. The procedure aims to shorten the time of head restraint surgery, minimize brain motion, and maximize the number of neurons recorded. A setup for presenting an immersive visual environment during calcium imaging is also described here, which can be used to study neural correlates underlying visually triggered behaviors.

Author Spotlight: Advancements in Adult Zebrafish Brain Research 

Here, we present a protocol to perform two-photon calcium imaging in the dorsal forebrain of adult zebrafish.

Adult zebrafish (Danio rerio) exhibit a rich repertoire of behaviors for studying cognitive functions. They also have a miniature brain that can be used ...

Light-Dark Preference Test: A Method to Study Anxiety-Related Behavior in Zebrafish

Source: Holcombe, A., et al. <a href="https://www.jove.com/v/51851/" target="_blank">A Novel Method of Drug Administration to Multiple Zebrafish (Danio rerio) and the Quantification of Withdrawal</a>. &#160;J. Vis. Exp.&#160;(2014)
The video describes the light-dark preference assay to study the anxiety-related behavior in zebrafish following the exposure to ethanol.

Source: Holcombe, A., et al. A Novel Method of Drug Administration to Multiple Zebrafish (Danio rerio) and the Quantification of Withdrawal. &#160;J. Vis. ...