Laboratory of Structural Biology
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Loss of DNA polymerase beta stacking interactions with templating purines, but not pyrimidines, alters catalytic efficiency and fidelity.
The Journal of biological chemistry Mar, 2002 | Pubmed ID: 11756435
Molecular basis of CIB binding to the integrin alpha IIb cytoplasmic domain.
The Journal of biological chemistry Aug, 2002 | Pubmed ID: 12023286
Efficiency of correct nucleotide insertion governs DNA polymerase fidelity.
The Journal of biological chemistry Dec, 2002 | Pubmed ID: 12370169
Rapid segmental and subdomain motions of DNA polymerase beta.
The Journal of biological chemistry Feb, 2003 | Pubmed ID: 12458221
Localization of the deoxyribose phosphate lyase active site in human DNA polymerase iota by controlled proteolysis.
The Journal of biological chemistry Aug, 2003 | Pubmed ID: 12777390
Influence of DNA structure on DNA polymerase beta active site function: extension of mutagenic DNA intermediates.
The Journal of biological chemistry Jul, 2004 | Pubmed ID: 15145936
DNA polymerase beta and flap endonuclease 1 enzymatic specificities sustain DNA synthesis for long patch base excision repair.
The Journal of biological chemistry Feb, 2005 | Pubmed ID: 15561706
DNA polymerase lambda mediates a back-up base excision repair activity in extracts of mouse embryonic fibroblasts.
The Journal of biological chemistry May, 2005 | Pubmed ID: 15749700
Nucleotide-induced DNA polymerase active site motions accommodating a mutagenic DNA intermediate.
Structure (London, England : 1993) Aug, 2005 | Pubmed ID: 16084394
Magnesium-induced assembly of a complete DNA polymerase catalytic complex.
Structure (London, England : 1993) Apr, 2006 | Pubmed ID: 16615916
Structure of DNA polymerase beta with a benzo[c]phenanthrene diol epoxide-adducted template exhibits mutagenic features.
Proceedings of the National Academy of Sciences of the United States of America Nov, 2006 | Pubmed ID: 17079493
Coordination of steps in single-nucleotide base excision repair mediated by apurinic/apyrimidinic endonuclease 1 and DNA polymerase beta.
The Journal of biological chemistry May, 2007 | Pubmed ID: 17355977
Structures of DNA polymerase beta with active-site mismatches suggest a transient abasic site intermediate during misincorporation.
Molecular cell May, 2008 | Pubmed ID: 18471977
Alpha,beta-methylene-2'-deoxynucleoside 5'-triphosphates as noncleavable substrates for DNA polymerases: isolation, characterization, and stability studies of novel 2'-deoxycyclonucleosides, 3,5'-cyclo-dG, and 2,5'-cyclo-dT.
Journal of medicinal chemistry Oct, 2008 | Pubmed ID: 18811136
Alpha,beta-difluoromethylene deoxynucleoside 5'-triphosphates: a convenient synthesis of useful probes for DNA polymerase beta structure and function.
Organic letters May, 2009 | Pubmed ID: 19351147
DNA polymerase beta substrate specificity: side chain modulation of the "A-rule".
The Journal of biological chemistry Nov, 2009 | Pubmed ID: 19759017
Synthesis and biological evaluation of fluorinated deoxynucleotide analogs based on bis-(difluoromethylene)triphosphoric acid.
Proceedings of the National Academy of Sciences of the United States of America Sep, 2010 | Pubmed ID: 20724659
Base excision repair and design of small molecule inhibitors of human DNA polymerase β.
Cellular and molecular life sciences : CMLS Nov, 2010 | Pubmed ID: 20844920
Substrate channeling in mammalian base excision repair pathways: passing the baton.
The Journal of biological chemistry Dec, 2010 | Pubmed ID: 20952393
Metal-induced DNA translocation leads to DNA polymerase conformational activation.
Nucleic acids research Apr, 2012 | Pubmed ID: 22169953
Binary complex crystal structure of DNA polymerase β reveals multiple conformations of the templating 8-oxoguanine lesion.
Proceedings of the National Academy of Sciences of the United States of America Jan, 2012 | Pubmed ID: 22178760
Stereospecific formation of a ternary complex of (S)-α,β-fluoromethylene-dATP with DNA pol β.
Chembiochem : a European journal of chemical biology Mar, 2012 | Pubmed ID: 22315190
Effect of β,γ-CHF- and β,γ-CHCl-dGTP halogen atom stereochemistry on the transition state of DNA polymerase β.
Biochemistry Oct, 2012 | Pubmed ID: 23043620
Amino acid substitution in the active site of DNA polymerase β explains the energy barrier of the nucleotidyl transfer reaction.
Journal of the American Chemical Society May, 2013 | Pubmed ID: 23647366
Insights into the conformation of aminofluorene-deoxyguanine adduct in a DNA polymerase active site.
The Journal of biological chemistry Aug, 2013 | Pubmed ID: 23798703
Observing a DNA polymerase choose right from wrong.
Cell Jul, 2013 | Pubmed ID: 23827680
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