Synthetic Biology Center,
Department of Biological Engineering,
Department of Electrical Engineering and Computer Science,
Synthetic Biology Center, Department of Biological Engineering
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Design and connection of robust genetic circuits.
Methods in enzymology , 2011 | Pubmed ID: 21601086
Automatic compilation from high-level biologically-oriented programming language to genetic regulatory networks.
PloS one , 2011 | Pubmed ID: 21850228
Understanding signaling dynamics through synthesis.
Science signaling Apr, 2012 | Pubmed ID: 22510466
Foundations for the design and implementation of synthetic genetic circuits.
Nature reviews. Genetics May, 2012 | Pubmed ID: 22596318
Modular design of artificial tissue homeostasis: robust control through synthetic cellular heterogeneity.
PLoS computational biology , 2012 | Pubmed ID: 22829755
Formation and optogenetic control of engineered 3D skeletal muscle bioactuators.
Lab on a chip Dec, 2012 | Pubmed ID: 22976544
Genetically programmable pathogen sense and destroy.
ACS synthetic biology Dec, 2013 | Pubmed ID: 23763381
Rapid, modular and reliable construction of complex mammalian gene circuits.
Nucleic acids research Sep, 2013 | Pubmed ID: 23847100
Microbead-based biomimetic synthetic neighbors enhance survival and function of rat pancreatic β-cells.
Scientific reports Oct, 2013 | Pubmed ID: 24091640
Realizing the potential of synthetic biology.
Nature reviews. Molecular cell biology 04, 2014 | Pubmed ID: 24622617
CRISPR transcriptional repression devices and layered circuits in mammalian cells.
Nature methods Jul, 2014 | Pubmed ID: 24797424
Systematic transfer of prokaryotic sensors and circuits to mammalian cells.
ACS synthetic biology Dec, 2014 | Pubmed ID: 25360681
Accurate predictions of genetic circuit behavior from part characterization and modular composition.
ACS synthetic biology Jun, 2015 | Pubmed ID: 25369267
A platform for rapid prototyping of synthetic gene networks in mammalian cells.
Nucleic acids research Dec, 2014 | Pubmed ID: 25378321
Rapid neurogenesis through transcriptional activation in human stem cells.
Molecular systems biology Nov, 2014 | Pubmed ID: 25403753
A load driver device for engineering modularity in biological networks.
Nature biotechnology Dec, 2014 | Pubmed ID: 25419739
Modular construction of mammalian gene circuits using TALE transcriptional repressors.
Nature chemical biology Mar, 2015 | Pubmed ID: 25643171
Highly efficient Cas9-mediated transcriptional programming.
Nature methods Apr, 2015 | Pubmed ID: 25730490
Mammalian synthetic circuits with RNA binding proteins for RNA-only delivery.
Nature biotechnology Aug, 2015 | Pubmed ID: 26237515
Isocost Lines Describe the Cellular Economy of Genetic Circuits.
Biophysical journal Aug, 2015 | Pubmed ID: 26244745
Preserved DNA Damage Checkpoint Pathway Protects against Complications in Long-Standing Type 1 Diabetes.
Cell metabolism Aug, 2015 | Pubmed ID: 26244933
SYNTHETIC BIOLOGY. Synthetic communities, the sum of parts.
Science (New York, N.Y.) Aug, 2015 | Pubmed ID: 26315419
N(1)-methylpseudouridine-incorporated mRNA outperforms pseudouridine-incorporated mRNA by providing enhanced protein expression and reduced immunogenicity in mammalian cell lines and mice.
Journal of controlled release : official journal of the Controlled Release Society Nov, 2015 | Pubmed ID: 26342664
Cas9 gRNA engineering for genome editing, activation and repression.
Nature methods Nov, 2015 | Pubmed ID: 26344044
Genetically engineering self-organization of human pluripotent stem cells into a liver bud-like tissue using Gata6.
Nature communications Jan, 2016 | Pubmed ID: 26732624
Synthetic Morphogenesis.
Cold Spring Harbor perspectives in biology Sep, 2016 | Pubmed ID: 27270296
A novel Bxb1 integrase RMCE system for high fidelity site-specific integration of mAb expression cassette in CHO Cells.
Biotechnology and bioengineering 08, 2017 | Pubmed ID: 28186334
Open-source, community-driven microfluidics with Metafluidics.
Nature biotechnology 06, 2017 | Pubmed ID: 28591125
A Modular Approach to Building Complex Synthetic Circuits.
Methods in molecular biology (Clifton, N.J.) , 2017 | Pubmed ID: 28801911
Programming gene and engineered-cell therapies with synthetic biology.
Science (New York, N.Y.) 02, 2018 | Pubmed ID: 29439214
A multi-landing pad DNA integration platform for mammalian cell engineering.
Nucleic acids research 05, 2018 | Pubmed ID: 29617873
Engineering modular intracellular protein sensor-actuator devices.
Nature communications 05, 2018 | Pubmed ID: 29760420
Stochastic Turing patterns in a synthetic bacterial population.
Proceedings of the National Academy of Sciences of the United States of America 06, 2018 | Pubmed ID: 29891706
A mixed antagonistic/synergistic miRNA repression model enables accurate predictions of multi-input miRNA sensor activity.
Nature communications 06, 2018 | Pubmed ID: 29934631
Small-molecule-based regulation of RNA-delivered circuits in mammalian cells.
Nature chemical biology 11, 2018 | Pubmed ID: 30327560
Engineering protein-protein devices for multilayered regulation of mRNA translation using orthogonal proteases in mammalian cells.
Nature communications 10, 2018 | Pubmed ID: 30349044
Author Correction: A mixed antagonistic/synergistic miRNA repression model enables accurate predictions of multi-input miRNA sensor activity.
Nature communications 11, 2018 | Pubmed ID: 30389927
Comparison of Integrases Identifies Bxb1-GA Mutant as the Most Efficient Site-Specific Integrase System in Mammalian Cells.
ACS synthetic biology 01, 2019 | Pubmed ID: 30609349
Dissecting N-Glycosylation Dynamics in Chinese Hamster Ovary Cells Fed-batch Cultures using Time Course Omics Analyses.
iScience Feb, 2019 | Pubmed ID: 30682623
In vitro evolution of enhanced RNA replicons for immunotherapy.
Scientific reports 05, 2019 | Pubmed ID: 31061426
Perspective: The promise of multi-cellular engineered living systems.
APL bioengineering Dec, 2018 | Pubmed ID: 31069321
Small-molecule control of antibody N-glycosylation in engineered mammalian cells.
Nature chemical biology 07, 2019 | Pubmed ID: 31110306
A high-throughput screening and computation platform for identifying synthetic promoters with enhanced cell-state specificity (SPECS).
Nature communications 06, 2019 | Pubmed ID: 31253799
A 'poly-transfection' method for rapid, one-pot characterization and optimization of genetic systems.
Nucleic acids research 10, 2019 | Pubmed ID: 31372658
Immunogenicity of RNA Replicons Encoding HIV Env Immunogens Designed for Self-Assembly into Nanoparticles.
Molecular therapy : the journal of the American Society of Gene Therapy 12, 2019 | Pubmed ID: 31515132
An Artificial Tissue Homeostasis Circuit Designed via Analog Circuit Techniques.
IEEE transactions on biomedical circuits and systems Jun, 2019 | Pubmed ID: 30908238
3D aggregation of cells in packed microgel media.
Soft matter Jul, 2020 | Pubmed ID: 32589183
Correction: 3D aggregation of cells in packed microgel media.
Soft matter Jul, 2020 | Pubmed ID: 32639490
Principles of synthetic biology: a MOOC for an emerging field.
Synthetic biology (Oxford, England) , 2019 | Pubmed ID: 32995535
An endoribonuclease-based feedforward controller for decoupling resource-limited genetic modules in mammalian cells.
Nature communications Nov, 2020 | Pubmed ID: 33173034
In Vivo Validation of a Reversible Small Molecule-Based Switch for Synthetic Self-Amplifying mRNA Regulation.
Molecular therapy : the journal of the American Society of Gene Therapy Mar, 2021 | Pubmed ID: 33186690
Rethinking organoid technology through bioengineering.
Nature materials Feb, 2021 | Pubmed ID: 33199860
TASBE Image Analytics: A Processing Pipeline for Quantifying Cell Organization from Fluorescent Microscopy.
Methods in molecular biology (Clifton, N.J.) , 2021 | Pubmed ID: 33340350
Context-aware synthetic biology by controller design: Engineering the mammalian cell.
Cell systems Jun, 2021 | Pubmed ID: 34139166
An engineered protein-phosphorylation toggle network with implications for endogenous network discovery.
Science (New York, N.Y.) Jul, 2021 | Pubmed ID: 34210851
Quantitative characterization of recombinase-based digitizer circuits enables predictable amplification of biological signals.
Communications biology Jul, 2021 | Pubmed ID: 34267310
Multifunctional oncolytic nanoparticles deliver self-replicating IL-12 RNA to eliminate established tumors and prime systemic immunity.
Nature cancer Sep, 2020 | Pubmed ID: 34447945
Meeting Measurement Precision Requirements for Effective Engineering of Genetic Regulatory Networks.
ACS synthetic biology Mar, 2022 | Pubmed ID: 35156365
Principles for the design of multicellular engineered living systems.
APL bioengineering Mar, 2022 | Pubmed ID: 35274072
Robust and tunable signal processing in mammalian cells via engineered covalent modification cycles.
Nature communications Mar, 2022 | Pubmed ID: 35361767
PERSIST platform provides programmable RNA regulation using CRISPR endoRNases.
Nature communications May, 2022 | Pubmed ID: 35562172
Synthetic neuromorphic computing in living cells.
Nature communications Sep, 2022 | Pubmed ID: 36153343
A synthetic transcription platform for programmable gene expression in mammalian cells.
Nature communications Oct, 2022 | Pubmed ID: 36257931
The sound of silence: Transgene silencing in mammalian cell engineering.
Cell systems Dec, 2022 | Pubmed ID: 36549273
Synthetic genetic circuits to uncover and enforce the OCT4 trajectories of successful reprogramming of human fibroblasts.
bioRxiv : the preprint server for biology Jan, 2023 | Pubmed ID: 36747813
Cholesterol-Amino-Phosphate (CAP) Derived Lipid Nanoparticles for Delivery of Self-Amplifying RNA and Restoration of Spermatogenesis in Infertile Mice.
Advanced science (Weinheim, Baden-Wurttemberg, Germany) Feb, 2023 | Pubmed ID: 36748274