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23 ARTICLES PUBLISHED IN JoVE

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Neuroscience

An In Vivo Duo-color Method for Imaging Vascular Dynamics Following Contusive Spinal Cord Injury
Chen Chen 1,2, Yi Ping Zhang 3, Yan Sun 1,4, Wenhui Xiong 1, Lisa B. E. Shields 3, Christopher B. Shields 3,5, Xiaoming Jin 1, Xiao-Ming Xu 1
1Spinal Cord and Brain Injury Research Group, Stark Neurosciences Research Institute, and Department of Neurological Surgery, Indiana University School of Medicine, 2Program in Medical Neuroscience, Stark Neurosciences Research Institute, Indiana University School of Medicine, 3Norton Neuroscience Institute, Norton Healthcare, 4Department of Human Anatomy & Histoembryology, School of Basic Medical Sciences, Fudan University, 5Department of Neurological Surgery, University of Louisville School of Medicine

We introduce an in vivo imaging method using two different fluorescent dyes to track dynamic spinal vascular changes following a contusive spinal cord injury in adult Sprague-Dawley rats.

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Medicine

Spinal Cord Lateral Hemisection and Asymmetric Behavioral Assessments in Adult Rats
Xiao-Jing Lin 1,2,3, Shaonan Wen 2,6, Ling-Xiao Deng 3, Heqiao Dai 3, Xiaolong Du 3, Chen Chen 3,4, Melissa J. Walker 3,4, Ting-Bao Zhao 1,5, Xiao-Ming Xu 3
1Department of Spinal Cord Injury and Repair, Trauma and Orthopedics Institute of Chinese PLA, 960th Hospital, Joint Logistics Support Force of PLA, 2Institute of Military Cognition and Brain Sciences, Academy of Military Medical Sciences, Academy of Military Sciences, 3Spinal Cord and Brain Injury Research Group, Stark Neurosciences Research Institute, Department of Neurological Surgery and Goodman Campbell Brain and Spine, Indiana University School of Medicine, 4Program in Medical Neuroscience, Paul and Carole Stark Neurosciences Research Institute, Indiana University School of Medicine, 5Department of Orthopedics, the Third Affiliated Hospital, Shandong University, 6Beijing Computing Center, Beijing Academy of Science and Technology

Here we describe surgical procedures to produce a reliable spinal cord lateral hemisection (HX) at the 9th thoracic level in adult rats and neurobehavioral assessments designed for detecting asymmetric deficits after such a unilateral injury.

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Engineering

Generation of Size-controlled Poly (ethylene Glycol) Diacrylate Droplets via Semi-3-Dimensional Flow Focusing Microfluidic Devices
Yan Wu 1, Xiang Qian 1, Shengli Mi 1, Min Zhang 1, Shuqing Sun 1, Xiaohao Wang 1,2
1Graduate School at Shenzhen, Tsinghua University, 2The State Key Laboratory of Precision Measurement Technology and Instruments, Tsinghua University

Here, we present a protocol to illustrate the fabrication processes and verifying experiments of a semi-three-dimensional (semi-3D) flow-focusing microfluidic chip for droplet formation.

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Medicine

Complete and Partial Aortic Occlusion for the Treatment of Hemorrhagic Shock in Swine
Aaron M. Williams *1, Umar F. Bhatti *1, Isabel S. Dennahy 1, Kiril Chtraklin 1, Panpan Chang 1, Nathan J. Graham 1, Basil M. Baccouche 1, Shalini Roy 1, Mohammed Harajli 1, Jing Zhou 1, Vahagn C. Nikolian 1, Qiufang Deng 1, Yuzi Tian 1, Baoling Liu 1, Yongqing Li 1, Gregory L. Hays 1,2, Julia L. Hays 1,2, Hasan B. Alam 1
1Department of Surgery, University of Michigan, 2Hays Innovations

Here, we present a protocol demonstrating a hemorrhagic shock model in swine that uses aortic occlusion as a bridge to definitive care in trauma. This model has application in testing a wide range of surgical and pharmacological therapeutic strategies.

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Chemistry

Methionine Functionalized Biocompatible Block Copolymers for Targeted Plasmid DNA Delivery
Yang Wu *1, Wei Zhang *2, Jian Zhang 2, Zhi-Xiang Mao 3, Li Ding 2, Hao Li 3, Rong Ma 1, Jin-Hai Tang 2
1Research Center of Clinical Oncology, Jiangsu Cancer Hospital & Jiangsu Institute of Cancer Research & Nanjing Medical University Affiliated Cancer Hospital, 2Department of General Surgery, The First Affiliated Hospital with Nanjing Medical University, 3School of Clinical Medicine, Xuzhou Medical University

This work presents the preparation of methionine functionalized biocompatible block copolymers (mBG) via the reversible addition-fragmentation chain transfer (RAFT) method. The plasmid DNA complexing ability of the obtained mBG and their transfection efficiency were also investigated. The RAFT method is very beneficial for polymerizing monomers containing special functional groups.

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Biochemistry

Biosynthesis of a Flavonol from a Flavanone by Establishing a One-pot Bienzymatic Cascade
Zhiping Zhang 1, Shuhang Fan 1, Zhiqiang Chen 1, Yanzhi He 1, Mengfei Huang 1, Li Ding 1, Yanyan Zhang 5, Lin Chen 1, Xinyue Zhang 1,2,3,4
1College of Bioscience and Biotechnology, Yangzhou University, 2Key Laboratory of Prevention and Control of Biological Hazard Factors (Animal Origin) for Agrifood Safety and Quality, Ministry of Agriculture of China, Yangzhou University, 3Joint International Research Laboratory of Agriculture & Agri-Product Safety, Yangzhou University, 4Jiangsu Co-innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, 5The Testing Center, Yangzhou University

The derivation of a flavonol is crucial for its application in healthcare and the food industry. Here, we provide a detailed protocol for the biosynthesis of a flavonol from a flavanone and discuss the crucial steps and its advantages over other approaches.

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Medicine

Osteoarthritis Pain Model Induced by Intra-Articular Injection of Mono-Iodoacetate in Rats
Jiaan Xu 1,2, Li Yan 1,2, Bo Yan 1,2, Li Zhou 1, Peijian Tong 1, Letian Shan 1
1The First Affiliated Hospital, Zhejiang Chinese Medical University, 2College of Pharmaceutical Science, Zhejiang Chinese Medical University

This study describes the method of intra-articular injection of mono-iodoacetate in rats and discusses the resulting pain-related behaviors and histopathological changes, which provide references for future applications.

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Medicine

Technical Modification of the Terminal Ureter During Total Transperitoneal Laparoscopic Nephroureterectomy for Upper Urinary Tract Urothelial Carcinoma
Chunlong Fu *1,2, Yaqun Zhang *1, Xin Wang 1, Shengcai Zhu 1, Huimin Hou 1, Shengjie Liu 1, Cheng Pang 1, Xinda Song 1, Jia Chen 1, Jianye Wang 1, Ming Liu 1,2
1(Urology) Beijing Hospital, National Center of Gerontology, The Joint Unit of the Chinese Academy of Medical Sciences, 2Graduate School of Peking Union Medical College, Beijing Hospital

Here, we present a protocol to increase the surgical field of view and reduce the difficulty of total transperitoneal laparoscopic nephroureterectomy surgery by precutting the umbilical ligament before treating the terminal ureter.

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Biology

Measuring Crop Motility and Food Passaging in Drosophila
Jiadong Cai *1,2, Junmeng Xi *1,2, Youheng Wei 1,2
1Joint International Research Laboratory of Agriculture and Agri-Product Safety, the Ministry of Education of China, Yangzhou University, 2College of Bioscience and Biotechnology, Yangzhou University

The goal of this protocol is to measure crop contraction and quantify food distribution in the Drosophila gut.

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Immunology and Infection

Use of Fimbrial Rod for F18ab Fimbriae+ STEC Colonization to Host Cells
Mingxu Zhou *1,2, Qiangde Duan *1,3, Yang Yang 1,3, Guoqiang Zhu 1,3
1College of Veterinary Medicine, Yangzhou University, 2Institute of Veterinary Immunology & Engineering, Jiangsu Academy of Agricultural Sciences, 3Jiangsu Co-innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses

Here we present a protocol to study the function of fimbriae in bacterial colonization.

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Immunology and Infection

A Non-Coding Small RNA MicC Contributes to Virulence in Outer Membrane Proteins in Salmonella Enteritidis
Xia Meng *1,2, Weiwei Cui *1, Xianchen Meng 1, Jianye Wang 1,2, Jinqiu Wang 3, Guoqiang Zhu 1,2
1College of Veterinary Medicine, Yangzhou University, 2Jiangsu Co-innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, 3Department of Animal Husbandry and Veterinary Medicine, Beijing Agricultural Vocational College

An λ-Red-mediated recombination system was used to create a deletion mutant of a small non-coding RNA micC.

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Biology

A Simple Dry Sectioning Method for Obtaining Whole-Seed-Sized Resin Section and Its Applications
Jiajing Qiu *1,2, Yinhui Ren *1,2, Lingxiao Zhao 1,2, Biao Zhang 1,2, Cunxu Wei 1,2
1Key Laboratory of Crop Genetics and Physiology of Jiangsu Province/Jiangsu Key Laboratory of Crop Genomics and Molecular Breeding, Yangzhou University, 2Co-Innovation Center for Modern Production Technology of Grain Crops of Jiangsu Province/Joint International Research Laboratory of Agriculture & Agri-Product Safety of the Ministry of Education, Yangzhou University

This technique allows for the fast and simple preparation of whole-seed-sized resin section for the observation and analysis of cells, starch granules, and protein bodies in different regions of the seed.

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Medicine

A Murine Tail Lymphedema Model
Aladdin H. Hassanein *1, Mithun Sinha *1, Colby R. Neumann 1, Ganesh Mohan 1, Imran Khan 1, Chandan K. Sen 1
1Department of Surgery, Indiana Center for Regenerative Medicine and Engineering, Indiana University School of Medicine

Lymphedema is extremity swelling caused by lymphatic dysfunction. We describe a chronic murine tail model of lymphedema and the novel use of tissue nanotransfection technology (TNT) for genetic cargo delivery to the tail.

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Immunology and Infection

Production of Monoclonal Antibodies Targeting Aminopeptidase N in the Porcine Intestinal Mucosal Epithelium
Pengpeng Xia 1,2,3, Siqi Lian 1,2,3, Yunping Wu 1,2,3, Li Yan 1,2,3
1College of Veterinary Medicine (Institute of comparative medicine), Yangzhou University, 2Jiangsu Co-innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, 3Joint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China, Yangzhou University

The recombinant antibody protein expressed in pIRES2-ZSGreen1-rAbs-APN-CHO cells and monoclonal antibodies produced using traditional hybridoma technology can recognize and bind to the porcine aminopeptidase N (APN) protein.

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Behavior

Individualized rTMS Treatment for Depression using an fMRI-Based Targeting Method
Xin Luo 1, Yiru Hu 1, Runhua Wang 1, Min Zhang 1, Xiaomei Zhong 1, Bin Zhang 1
1Affiliated Brain Hospital of Guangzhou Medical University

The present protocol describes the application of repetitive transcranial magnetic stimulation (rTMS), where a subregion of the dorsolateral prefrontal cortex (DLPFC) with the strongest functional anticorrelation with the subgenual anterior cingulate cortex (sgACC) was located as the stimulation target under the assistance of a fMRI-based neuronavigation system.

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Biology

A Non-Degradative Extraction Method for Molecular Structure Characterization of Bacterial Glycogen Particles
Jun-Jiao Wang *1, Meng-Meng Wang *2,3, You-Wei He 4, Zhang-Wen Ma 2,3, Zi-Yi Wang 5,6,7, Rui Qiao 2,3, Xin-Le Tan 5,6, Qing-Hua Liu 8, Liang Wang 1,2
1Department of Bioinformatics, School of Medical Informatics and Engineering, Xuzhou Medical University, 2Jiangsu Key Laboratory of New Drug Research and Clinical Pharmacy, School of Pharmacy, Xuzhou Medical University, 3Department of Pharmaceutical Analysis, School of Pharmacy, Xuzhou Medical University, 4Department of Biological Sciences, School of Life Sciences, Xuzhou Medical University, 5School of Chemistry and Molecular Biosciences, The University of Queensland, 6Centre for Nutrition and Food Sciences, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, 7Joint International Research Laboratory of Agriculture and Agri-Product Safety, College of Agriculture, Yangzhou University, 8State Key Laboratory of Quality Research in Chinese Medicines, Macau University of Science and Technology

Bacterial glycogen structure is greatly impacted by extraction methods which may result in molecular degradation and/or biased sampling. It is essential to develop methods to minimize these problems. Here, four extraction methods have been compared using size distribution and chain length distribution as key criteria for minimizing extraction artifacts.

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Biochemistry

The Extraction of Liver Glycogen Molecules for Glycogen Structure Determination
Ziyi Wang 1,2, Qinghua Liu 3,4, Liang Wang 3,5, Robert G. Gilbert 1,2,6, Mitchell A. Sullivan 7
1School of Chemistry and Molecular Biosciences, The University of Queensland, 2Centre for Nutrition and Food Sciences, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, 3Jiangsu Provincial Key Laboratory of New Drug Research and Clinical Pharmacy, School of Pharmacy, Xuzhou Medical University, 4Department of Pharmaceutical Analysis, School of Pharmacy, Xuzhou Medical University, 5Department of Bioinformatics, School of Medical Informatics and Engineering, Xuzhou Medical University, 6Joint International Research Laboratory of Agriculture and Agri-Product Safety, College of Agriculture, Yangzhou University, 7Glycation and Diabetes Group, Mater Research Institute-The University of Queensland, Translational Research Institute

An optimal sucrose concentration was determined for the extraction of liver glycogen using sucrose density gradient centrifugation. The addition of a 10 min boiling step to inhibit glycogen-degrading enzymes proved beneficial.

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Developmental Biology

In Ovo Intravascular Injection in Chicken Embryos
Kai Jin 1,2, Jing Zhou 1,2, Gaoyuan Wu 1,2, Ziyi Lian 1,2, Zongyi Zhao 1,2, Shujian Zhou 1,2, Chen Chen 1,2, Hongyan Sun 1,2, Yingjie Niu 1,2, Qishenng Zuo 1,2, Yani Zhang 1,2, Jiuzhou Song 3, Guohong Chen 1,2, Bichun Li 1,2,4
1Joint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China, Yangzhou University, 2Key Laboratory of Animal Breeding Reproduction and Molecular Design for Jiangsu Province, College of Animal Science and Technology, Yangzhou University, 3Animal & Avian Sciences, University of Maryland, College Park, 4College of Biotechnology, Jiangsu University of Science and Technology

The overall goal of this paper is to describe how to perform in ovo intracellular injection of exogenous materials into chicken embryos. This approach is very useful to study the developmental biology of chicken embryos.

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Biology

Construction of Homozygous Mutants of Migratory Locust Using CRISPR/Cas9 Technology
Qiang Yan *1, Yingying He *2,3, Yang Yue 2,3, Luyao Jie 1, Tingmei Wen 2,3, Yumiao Zhao 2,3, Min Zhang 2, Tingting Zhang 2
1State Key Laboratory of Cotton Biology, Key Laboratory of Plant Stress Biology, School of Life Sciences, Henan University, 2Research Institute of Applied Biology, Shanxi University, 3School of Life Science, Shanxi University

This study provides a systematically optimized procedure of CRISPR/Cas9 ribonuclease-based construction of homozygous locust mutants as well as a detailed method for cryopreservation and resuscitation of the locust eggs.

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Chemistry

Constructing Cyclic Peptides Using an On-Tether Sulfonium Center
Chunli Song *1, Zhanfeng Hou *1,2, Zijun Jiao *1, Zhaodi Liu 3, Chenshan Lian 1,2, Min Zhang 1, Wei Liang 3, Feng Yin 1,2, Zigang Li 1,2
1Pingshan Translational Medicine Center, Shenzhen Bay Laboratory, 2Key Laboratory of Chemical Genomics, School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate School, 3Department of Radiation Oncology, the First Affiliated Hospital, Anhui Medical University

This protocol presents the synthesis of cyclic peptides via bisalkylation between cysteine and methionine and the facile thiol-yne reaction triggered by the propargyl sulfonium center.

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Biology

A Modified Technique for Transverse Aortic Constriction in Mice
Kudusi Abuduwufuer *1,2, James Jiqi Wang *1,2, Huihui Li *1,2, Chen Chen 1,2
1Division of Cardiology, Department of Internal Medicine, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, 2Hubei Key Laboratory of Genetics and Molecular Mechanism of Cardiological Disorders, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology

The present protocol describes a modified and simplified technique with a minimally invasive transverse aortic constriction (TAC) procedure using a self-made retractor. This procedure can be conducted without a ventilator or microscope and introduces pressure overload, eventually leading to cardiac hypertrophy or heart failure.

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Biology

AirID-Based Proximity Labeling for Protein-Protein Interaction in Plants
Ahmad Zada *1, Imran Khan *1, Min Zhang 1, Yuting Cheng 1, Xueyun Hu 1
1College of Bioscience and Biotechnology, Yangzhou University

Here, we present a step-by-step protocol for performing the proximity labeling (PL) experiment in cucumber (Cucumis sativus L.) using AT4G18020 (APRR2)-AirID protein as a model. The method describes the construction of a vector, the transformation of a construct through agroinfiltration, biotin infiltration, protein extraction, and purification of biotin-labeled proteins through affinity purification technique.

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Immunology and Infection

A Mouse Ear Model for Allergic Contact Dermatitis Evaluation
Haifeng Shao 1,2,3,4, Jialin Deng 2,3,4, Yanqing Liu 1,2,3,4, Niuniu Yang 1,2,3,4
1Department of Traditional Chinese Medicine, The Affiliated Hospital of Yangzhou University, Yangzhou University, 2Department of Traditional Chinese and Western Medicine, Medical College, Yangzhou University, 3The Key Laboratory of Syndrome Differentiation and Treatment of Gastric Cancer of the State Administration of Traditional Chinese Medicine, Yangzhou University, 4Jiangsu Key Laboratory of Integrated Traditional Chinese and Western Medicine for Prevention and Treatment of Senile Diseases, Yangzhou University

Here, we describe the methods for inducing allergic contact dermatitis in mouse ears by 1-fluoro-2,4-dinitrobenzene (DNFB) and how to evaluate the severity of allergic contact dermatitis.

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