We thank the Perth Children&#8217;s Hospital Foundation for their generous support in purchasing the EEG equipment used in this project.&#160;We thank Gardar Thorvardsson (Kvikna) and Ieesha Sparks (Temple Medical and Scientific) for their support in the technical aspects of the study project.

The study was approved by the Child and Adolescent Health Service (CAHS) Human Research Ethics Committee (HREC, Approval Number RGS0000004988) and adhered to the tenets of the Declaration of Helsinki.
1. Identification of patients for inclusion in the study
<ol>
	<li>At the time of referral determine the infant&#39;s eligibility to be enrolled in the study. Any infant with suspected HIE requiring transport is eligible for the study.</li>
	<li>Use the standardized diagnostic ...

Using a Portable Amplitude-Integrated Electroencephalogram for Infant Transport

<ol>
	<li>Kurinczuk, J. J., White-Koning, M., Badawi, N. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Epidemiology+of+neonatal+encephalopathy+and+hypoxic-ischaemic+encephalopathy.">Epidemiology of neonatal encephalopathy and hypoxic-ischaemic encephalopathy.</a> Early Hum Dev. 86 (6), 329-338 (2010).</li><li>. Midwives Notification System, Government of Western Australia, Department of Health Available from: <a target="_blank" href="https://www.health.wa.gov.au/Reports-and-publications/Western-Australias-Mothers-and-Babies-summary-information/data?report=mns_birth_y">https://www.health.wa.gov.au/Reports-and-publications/Western-Australias-Mothers-and-Babies-summary-information/data?report=mns_birth_y</a> (2023)</li><li>Shankaran, S., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Whole-body+hypothermia+for+neonates+with+hypoxic-ischemic+encephalopathy.">Whole-body hypothermia for neonates with hypoxic-ischemic encephalopathy.</a> N Engl J Med. 353 (15), 1574-1584 (2005).</li><li>Thoresen, M., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Time+is+brain:+Starting+therapeutic+hypothermia+within+three+hours+after+birth+improves+motor+outcome+in+asphyxiated+newborns.">Time is brain: Starting therapeutic hypothermia within three hours after birth improves motor outcome in asphyxiated newborns.</a> Neonatology. 104 (3), 228-233 (2013).</li><li>Wall&#248;e, L., Hjort, N. L., Thoresen, M. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Start+cooling+as+soon+as+possible.">Start cooling as soon as possible.</a> Acta Paediatr. 108 (4), 771 (2019).</li><li>Skranes, J. H., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Amplitude-integrated+electroencephalography+improves+the+identification+of+infants+with+encephalopathy+for+therapeutic+hypothermia+and+predicts+neurodevelopmental+outcomes+at+2+years+of+age.">Amplitude-integrated electroencephalography improves the identification of infants with encephalopathy for therapeutic hypothermia and predicts neurodevelopmental outcomes at 2 years of age.</a> J Pediatr. 187, 34-42 (2017).</li><li>Shalak, L. F., Laptook, A. R., Velaphi, S. C., Perlman, J. M. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Amplitude-integrated+electroencephalography+coupled+with+an+early+neurologic+examination+enhances+prediction+of+term+infants+at+risk+for+persistent+encephalopathy.">Amplitude-integrated electroencephalography coupled with an early neurologic examination enhances prediction of term infants at risk for persistent encephalopathy.</a> Pediatrics. 111 (2), 351-357 (2003).</li><li>Hellstrom-Westas, L., Rosen, I., Svenningsen, N. W. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Predictive+value+of+early+continuous+amplitude+integrated+eeg+recordings+on+outcome+after+severe+birth+asphyxia+in+full+term+infants.">Predictive value of early continuous amplitude integrated eeg recordings on outcome after severe birth asphyxia in full term infants.</a> Arch Dis Child Fetal Neonatal Ed. 72 (1), F34-F38 (1995).</li><li>Davies, A., Wassink, G., Bennet, L., Gunn, A. J., Davidson, J. O. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Can+we+further+optimize+therapeutic+hypothermia+for+hypoxic-ischemic+encephalopathy.">Can we further optimize therapeutic hypothermia for hypoxic-ischemic encephalopathy.</a> Neural Regen Res. 14 (10), 1678 (2019).</li><li>Davis, J. W., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Outcomes+to+5+years+of+outborn+versus+inborn+infants+&lt;32+weeks+in+western+australia:+A+cohort+study+of+infants+born+between+2005+and+2018.">Outcomes to 5 years of outborn versus inborn infants &lt;32 weeks in western australia: A cohort study of infants born between 2005 and 2018.</a> Arch Dis Child Fetal Neonatal Ed. 108 (5), 499-504 (2023).</li><li>Schomer, D. L. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Ambulatory+EEG+monitoring,+reviewing,+and+interpreting.">Ambulatory EEG monitoring, reviewing, and interpreting.</a> J Clin Neurophysiol. 38 (2), 77-86 (2021).</li><li>. Neonatology. Hypoxic ischaemic encephalopathy (HIE) Available from: <a target="_blank" href="https://cahs.health.wa.gov.au/~/media/HSPs/CAHS/Documents/Health-Professionals/Neonatology-guidelines/Hypoxic-Ischaemic-Encephalopathy.pdf?thn=0">https://cahs.health.wa.gov.au/~/media/HSPs/CAHS/Documents/Health-Professionals/Neonatology-guidelines/Hypoxic-Ischaemic-Encephalopathy.pdf?thn=0</a> (2018)</li><li>. Neonatology. Monitor: Low impedance needle electrodes Available from: <a target="_blank" href="https://cahs.health.wa.gov.au/-/media/HSPs/CAHS/Documents/Health-Professionals/Neonatology-guidelines/Brainz-Monitor-Low-Impedance-Needle-Electrodes.pdf?thn=0">https://cahs.health.wa.gov.au/-/media/HSPs/CAHS/Documents/Health-Professionals/Neonatology-guidelines/Brainz-Monitor-Low-Impedance-Needle-Electrodes.pdf?thn=0</a> (2021)</li><li>Found, P. W. H., Baines, D. B. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Efficacy+of+securing+cannulae+with+different+taping+methods.">Efficacy of securing cannulae with different taping methods.</a> Anaesth Intensive Care. 28 (5), 547-551 (2000).</li><li>Stephens, C. M., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Electroencephalography+quality+and+application+times+in+a+pediatric+emergency+department+setting:+A+feasibility+study.">Electroencephalography quality and application times in a pediatric emergency department setting: A feasibility study.</a> Pediatr Neurol. 148, 82-85 (2023).</li><li>Variane, G. F. T., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Remote+monitoring+for+seizures+during+therapeutic+hypothermia+in+neonates+with+hypoxic-ischemic+encephalopathy.">Remote monitoring for seizures during therapeutic hypothermia in neonates with hypoxic-ischemic encephalopathy.</a> JAMA Netw Open. 6 (11), e2343429 (2023).</li><li>Bruns, N., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Application+of+an+amplitude-integrated+EEG+monitor+(cerebral+function+monitor)+to+neonates.">Application of an amplitude-integrated EEG monitor (cerebral function monitor) to neonates.</a> J Vis Exp. 127, 55985 (2017).</li><li>Dilena, R., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Consensus+protocol+for+eeg+and+amplitude-integrated+eeg+assessment+and+monitoring+in+neonates.">Consensus protocol for eeg and amplitude-integrated eeg assessment and monitoring in neonates.</a> Clin Neurophysiol. 132 (4), 886-903 (2021).</li><li>Moghadam, S. M., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=An+automated+bedside+measure+for+monitoring+neonatal+cortical+activity:+A+supervised+deep+learning-based+electroencephalogram+classifier+with+external+cohort+validation.">An automated bedside measure for monitoring neonatal cortical activity: A supervised deep learning-based electroencephalogram classifier with external cohort validation.</a> Lancet Digit Health. 4 (12), e884-e892 (2022).</li></ol>

This novel study describes the application and early data acquisition of aEEG in infants with suspected HIE who require transport soon after birth. aEEG application during neonatal transport has not been reported previously. aEEG has been used under novel circumstances, such as remote monitoring under telehealth neurocritical care consultation in Brazil and the Paediatric ED15,16. 
The aEEG needle application is similar to that used ...

Impaired oxygen delivery or blood flow to the brain around the time of birth can cause brain injury (hypoxic ischemic encephalopathy; HIE). This is a leading cause of death and disability in full-term babies1. HIE is reported to have a worldwide incidence of 2 per 1000 deliveries, which is likely to be higher in low to middle-income countries. In Western Australia, approximately 50 babies are born each year who have a clinical diagnosis of HIE (32308 live births in 2022, an incidence of approximately 1.5 per 10002).
HIE is diagnosed with criteria based on the circumstances of birth, changes in the infant&#39;s blood acid balance (from umbilical cord or baby after birth), and changes in neurological status3. The treatment for moderate or severe HIE is whole-body hypothermia of 33-34 &#176;C. The earlier this is commenced, the likely greater the benefit to the baby&#39;s neurological outcome3,4,5. Amplitude-integrated EEG (aEEG) is an essential part of assessment and monitoring, which in many regions is only available in tertiary centers. Electrodes (EEG safety DIN connector or DIN 42802 with 1.5 mm diameter pin) are inserted into the scalp to measure and record brain electrical activity. Electrodes are then connected to an amplifier, which is in turn connected to a clinical tablet computer to display and record brainwave activity. aEEG can provide information on brain wave activity and be used to assist with the diagnosis of HIE6. The combination of neurological examination and aEEG may enhance the ability to identify infants with moderate or severe HIE7,8,9.
The Newborn Emergency Transport Service of Western Australia (NETS WA) provides intensive care transport to approximately 1100 sick babies per year. Healthcare staff in local hospitals can contact NETS WA through a free phone number and are immediately connected via a conference call with a neonatal specialist doctor and nurse to request a transfer. The NETS team travels either by specialized road ambulance or fixed-wing aircraft with a purpose-built intensive care transport equipment cot. On arrival of the transport team to the referring hospital, the baby is assessed, and treatment is continued or escalated. The team then transfers the infant to a tertiary neonatal intensive care unit (NICU) in the state capital (Perth). In Western Australia, owing to the often-large distances between referring hospitals and centralized specialist services10 (a maximum distance of 1381 miles), aEEG may not applied for up to many hours after birth, leading to a delay in treatment.
Many monitoring systems have been designed for the intensive care unit but owing to their size and power requirement, they are impractical for the transport environment. Ward-based equipment is prone to movement artifacts, which may record insufficient quality data in the transport environment. Ambulatory EEG amplifier technology, designed primarily to be worn by patients at home, can connect to a computer tablet with EEG detection software and be applied to a newborn during transport11. This can be carried by the neonatal transport team to a baby with suspected HIE. The software is capable of being viewed remotely via a portable internet uplink and web-based viewer. Currently, there are no reports on the suitability or readability of aEEG in the transport environment.
Applying and monitoring aEEG in the transport of infants with HIE has not been previously reported, and there are no existing protocols for its use. There is no evidence to support feasibility or utility in the transport environment. We present a protocol for aEEG use in neonatal transport. It aims to assess whether aEEG in babies with HIE who require transport after birth is feasible and can provide readable clinical information.

<table border="1" fo:keep-together.within-page="1" fo:keep-with-next.within-page="always">
	<tbody>
		<tr>
			<td>Stratus EEG Centrum, Acquire Pro Software for 
			Microsoft Windows</td>
			<td>Stratus Software Solutions LLC 
			Kvikna Medical Lyngh&#225;ls 9 110 Reykjavik Iceland</td>
			<td>Version 4.2</td>
			<td></td>
		</tr>
		<tr>
			<td>Trackit T4PCU24+8</td>
			<td>Lifelines Neuro 
			7 Clarendon Court 
			Over Wallop 
			StockBridge 
			Hants, UK</td>
			<td>SN: T4-170046 
			Issue: 4 C169</td>
			<td></td>
		</tr>
		<tr>
			<td>Ultra Subdermal Needle Electrode</td>
			<td>Natus 
			3150 Pleasant View Road 
			Middleton 
			WI 53562 
			USA</td>
			<td>019-476600</td>
			<td>14 mm x 0.38 mm 
			SST Needle 
			DIN 42802 connector</td>
		</tr>
	</tbody>
</table>

amplitude-integrated eeg in infants at risk of hypoxic-ischemic encephalopathy: a feasibility study in road and air transport in western australia

Infants at risk of HIE require early identification and initiation of therapeutic hypothermia (TH). Earlier treatment with TH is associated with better outcomes. aEEG is frequently used when making the decision whether to commence TH. As this is often limited to tertiary centers, TH may be delayed if the infant requires transport to a center that provides it. We aimed to provide a method for the application of amplitude-integrated electroencephalogram (aEEG) and to determine the feasibility of acquiring clinically meaningful information during transport. All infants &#8805;35 weeks, at risk of HIE at referral, were eligible for inclusion. Scalp electrodes were placed in the C3-C4; P3-P4 position on the infant&#39;s scalp and connected to the aEEG amplifier. The aEEG amplifier was, in turn, connected to a clinical tablet computer with EEG software to collect and analyze aEEG information. Recordings were reviewed by the chief principal investigator and two independent reviewers (blinded) for background trace and artifact. Predefined criteria for data quality were set to movement artifacts and software impedance notifications. Surveys were completed by healthcare staff and parents for acceptability and ease of use.

Author Spotlight: Assessing the Feasibility of Using Amplitude-Integrated EEG During Neonatal Transport

Amplitude-Integrated EEG in Infants at Risk of Hypoxic-Ischemic Encephalopathy: A Feasibility Study in Road and Air Transport in Western Australia

We wanted to assess the feasibility of using an amplitude-integrated electroencephalogram during neonatal transport. Using clinical criteria, we determined whether the trace acquired during the transport was readable. This helps the clinician in the diagnosis and prognosis of babies requiring transportation following possible birth asphyxia or hypoxic ischemic encephalopathy.Remote monitoring automated devices and innovative transport systems to improve outcomes in sick and premature newborns. Performing any research during transport has its difficulties but is essential in improving care. Getting appropriate consent is challenging in a time of acute stress.The clinical team is required to perform research as well as clinical tasks, adding to the complexity of the transport process. We have established the necessity of undertaking research in neonatal transport and are seeking ways to improve the outcomes in babies who need to be transported after birth. We are working on means of improving thermal regulation in neonatal transport.We would like to see whether amplitude-integrated EEG enables an earlier and more accurate diagnosis of hypoxic ischemic encephalopathy. We would also like to explore if machine learning can be used to augment diagnostic decisions. Finally, we wish to assess whether this has an impact on important outcomes such as mortality and neurodevelopmental outcomes.

Between 1st September 2022 and 5th June 2023, 25 babies were transported in Western Australia with possible HIE and were eligible for inclusion. Of the total, 20 infants were consented, recruited, and successfully had aEEG applied during their transport. A total of 5 patients were not recruited and 3 were missed for consent. In one case, the device had started an automatic software update and was unusable; in one case, the baby was not at risk of HIE and was deemed ineligible for recruitment. Of the...

Here, we present a feasibility study to assess a portable amplitude-integrated electroencephalogram (aEEG) recording system during the transport of infants with suspected hypoxic ischemic encephalopathy (HIE).

Infants at risk of HIE require early identification and initiation of therapeutic hypothermia (TH). Earlier treatment with TH is associated with better ...

amplitude-integrated-eeg-infants-at-risk-hypoxic-ischemic

Research

JoVE Journal

Medicine

230 ビュー.  Government of Western Australia, Child and Adolescent Health Service. 新生児の輸送中に振幅積分脳波を使用することの実現可能性を評価したいと考えました。臨床基準を用いて、輸送中に取得したトレースが読み取り可能であったかどうかを判断した。これは、臨床医が、出生仮死または低酸素性虚血性脳症の可能性のある後に輸送が必要な赤ちゃんの診断と予後に役立ちます。遠隔監視自動化デバイスと革...

ビデオ: 著者スポットライト:新生児輸送中の振幅積分EEGの使用の実現可能性の評価

Here, we present a feasibility study to assess a portable amplitude-integrated electroencephalogram (aEEG) recording system during the transport of infants with suspected hypoxic ischemic encephalopathy (HIE).

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monitoring the portable amplitude-integrated electroencephalogram (aeeg) system during transport of infants

Monitoring the Portable Amplitude-Integrated Electroencephalogram (aEEG) System During Transport of Infants

application of an amplitude-integrated eeg monitor (cerebral function monitor) to neonates

Application of an Amplitude-integrated EEG Monitor Cerebral Function Monitor to Neonates

Here, we show how to apply amplitude-integrated electroencephalography to monitor cerebral function in...

Application of an Amplitude-integrated EEG Monitor (Cerebral Function Monitor) to Neonates

recording eeg in freely moving neonatal rats using a novel method

Recording EEG in Freely Moving Neonatal Rats Using a Novel Method

Here, we introduce a novel technique designed to record electroencephalography (EEG) in freely moving neonatal epileptic pups and describe its procedures, features, and applications. This method allows one to record EEG for more than 1...

setting up the portable amplitude-integrated electroencephalogram (aeeg) recording system for transporting infants

Setting up the Portable Amplitude-Integrated Electroencephalogram (aEEG) Recording System for Transporting Infants

demonstration of membrane transport of histidine using goat intestinal inverted sacs: an experiential pedagogical tool for undergraduates

Author Spotlight: Experiential Tool for Teaching Active Transport Using Ex Vivo Histidine Uptake

Here, we report an inexpensive and reproducible method demonstrating the membrane transport of histidine in a goat intestine. This process occurs by co-transporting histidine and sodium ions enabled by the sodium gradient across the enterocyte membrane. This method exploits experiential learning pedagogy to better understand solute movement across biological...

Sodium-Dependent Histidine Absorption in Goat Jejunal Inverted Sacs

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sampling cerebrospinal fluid and blood from lateral tail vein in rats during eeg recordings

Author Spotlight: Obtaining High-Quality CSF and Blood Samples for Epilepsy Biomarker Discovery 

The protocol shows repeated cerebrospinal fluid and blood collections from epileptic rats performed in parallel with continuous video-electroencephalogram (EEG) monitoring. These are instrumental for exploring possible links between changes in various body fluid molecules and seizure activity.

Cerebrospinal Fluid and Blood Withdrawal from Rats with Concurrent EEG Recording

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neonatal mouse bone marrow isolation and preparation of bone marrow-derived macrophages

Author Spotlight: Developing a Reproducible Method for Isolating Bone Marrow-Derived Macrophages from Neonatal Mice to Advance Early Life Immune Responses

This protocol describes a non-enzymatic and straightforward method for isolating 7-9-day-old neonatal mouse bone marrow cells and generating differentiated macrophages using a supernatant of L929 cells as a source of granulocyte colony-stimulating factor (M-CSF). The bone marrow-derived macrophages were further analyzed for surface antigens F4/80, CD206, CD11b, and functional...

Phagocytic Assay Evaluation of Neonatal Bone Marrow Derived Macrophages 

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simultaneous eeg monitoring during transcranial direct current stimulation

Simultaneous EEG Monitoring During Transcranial Direct Current Stimulation

Transcranial direct current stimulation (tDCS) is a non-invasive brain stimulation technique that has shown initial therapeutic effects in several neurological conditions. The main mechanism underlying these therapeutic effects is the modulation of cortical excitability. Therefore, online monitoring of cortical excitability would help guide stimulation parameters and optimize its therapeutic effects. In the present article we review the use of a novel device that combines simultaneous tDCS and...

hemodynamic precision in the neonatal intensive care unit using targeted neonatal echocardiography

Hemodynamic Precision in the Neonatal Intensive Care Unit using Targeted Neonatal Echocardiography

Presented here is a protocol to perform comprehensive neonatal echocardiography by trained neonatologists in the neonatal intensive care unit. The trained individuals provide longitudinal assessments of heart function, systemic and pulmonary hemodynamics in a consultative role. The manuscript also describes the requirements to become a fully trained neonatal hemodynamics...

an experiment using functional near-infrared spectroscopy and robot-assisted multi-joint pointing movements of the lower limb

Author Spotlight: Assessing Brain Activity in Robotic-Assisted Lower Limb Rehabilitation Using fNIRS

It is estimated that 1 in 6 individuals worldwide will have a stroke in their lifetime, causing long-term disability, whose rehabilitation mechanisms are still poorly understood. This study proposes a protocol to evaluate brain activation by functional near-infrared spectroscopy (fNIRS) during a lower limb robotic therapy...

Evaluating Brain Activation by fNIRS During a Lower Limb Robotic Therapy Session

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continuous video electroencephalogram during hypoxia-ischemia in neonatal mice

Continuous Video Electroencephalogram during Hypoxia-Ischemia in Neonatal Mice

This manuscript describes a method for continuous video EEG recordings using multiple depth electrodes in neonatal mice undergoing...

collection of blood from the tail vein of rats during eeg recordings

Collection of Blood from the Tail Vein of Rats During EEG Recordings  

original experimental approach for assessing transport fuel stability

Original Experimental Approach for Assessing Transport Fuel Stability

Oxidation stability of transport fuels has become a concern for future fuel development. This work presents an original methodology developed by IFP Energies Nouvelles for assessing fuel stability using two different reactors. This methodology was successfully applied to gain an in-depth understanding of the oxidation kinetics and pathways of model molecules and commercial...

intrathecal injection of newborn mouse for genome editing and drug delivery

Author Spotlight: Intrathecal Injection &amp;#8211; An Efficient and Reliable Delivery Method to Test the Efficacy of Gene Editing in Neonatal Mouse Brains

The present protocol outlines step-by-step instructions for performing intrathecal injections in neonatal mice for gene editing and drug...

A Comprehensive Protocol for Delivering Intrathecal Injections in Neonatal Mice

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a clinical metaproteomics workflow implemented within galaxy bioinformatics platform to analyze host-microbiome interactions underlying human disease

Author Spotlight: Improving Host-Microbiome Protein Identification and Functional Insights Using the Galaxy Platform

Clinical metaproteomics offers insights into the human microbiome and its contributions to disease. We harnessed the computational power of the Galaxy platform to develop a modular bioinformatics workflow that facilitates complex mass spectrometry-based metaproteomic analysis and characterization of diverse clinical sample types relevant to studies of...

Galaxy-Enabled Metaproteomics: Insights into Host-Microbiome Interaction

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a neonatal heterotopic rat heart transplantation model for the study of endothelial-to-mesenchymal transition

Author Spotlight: A Neonatal Heterotopic Rat Heart Transplantation Model for the Study of Endothelial-to-Mesenchymal Transition  

This work presents an animal model of endothelial-to-mesenchymal transition-induced fibrosis, as seen in congenital cardiac defects such as critical aortic stenosis or hypoplastic left heart syndrome, which allows for detailed histological tissue evaluation, the identification of regulatory signaling pathways, and the testing of treatment options.

In Vivo Heart Transplantation to Study Endothelial-to-Mesenchymal Transition

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recording brain activity with electroencephalography (eeg) during the virtual spatial navigation task

Recording Brain Activity with Electroencephalography (EEG) During the Virtual Spatial Navigation Task

129xe hyperpolarization and assessment of polarization loss during transport

129Xe Hyperpolarization and Assessment of Polarization Loss During Transport  

129Xe Hyperpolarization and Assessment of Polarization Loss During Transport

To begin assembling the amplitude-integrated electroencephalogram or aEEG recording system, first, insert the aEEG electrode pins into the infant's scalp per standard guidelines. Next, measure and locate the two anatomical landmarks, sagittal suture and ear tragus. Align the electrode measuring tape vertically on the head and parallel to the face.Match the letters or symbols on the positioning aid until the same letter or symbol appears in both locations. Mark the positions with a surgical pen on each side of the tape. Let the hair part naturally or part it vertically away from the marked position using sterile water and swab sticks.Dry the area with gauze. Then clean the skin with swabs containing 1%chlorhexidine and 70%alcohol, and let it dry. Hold the skin tight and insert the needle at a 30=degree angle with the sensor wire upwards.If the scalp is very hairy, use skin preparation swabs around the needle insertion site. Secure the subdermal needle electrode in place using Steri-Strips and the Chevron method. Use two small pieces of Tegaderm on opposite sides of the needle to sandwich the needle.Point the needles and wires in the same direction. Place the reference electrode on the chest anteriorly or posteriorly, the back of the shoulder, or the nape area of the neck. Connect the electrodes to the aEEG amplifier using the C3-C4 and P3-P4 configurations.Connect the amplifier to the tablet computer using an ethernet cable. Turn on the tablet and log in. Enter the Acquire Pro application, which will automatically apply the default neonatal configuration.Change the default settings of impedance from five kiloohms to 10 kiloohms. Press Record Now to automatically create a patient ID.Press the EEG tab to observe the live trace. Finally, secure the clinical tablet to the cot used to transport the infant, which is either a Mansell Neocot or a Voyager Transport Incubator.The location of the tablet on the cot depends on which cot is taken on the transport.

Proceed to transport the infant after setting up the portable amplitude integrated electroencephalogram or AEEG recording system. During the transport, note any movements that may contribute to artifact, clinical change, or seizure on the tablet software. Use buttons on the tablet to label important events including seizure, patient care, loading or unloading, takeoff, and landing.For non-continuous events, press the button only once for a timestamp. For continuous clinical events such as seizures, observe the label added for the event duration. When one continuous event finishes, press the button a second time.On arrival at the receiving hospital, transfer the baby to the intensive care bed. Disconnect scalp electrodes from the study amplifier, and transfer them onto the Neonatal Intensive Care Unit AEEG monitor to continue the recording per unit protocol.