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Specific and nonspecific hybridization of oligonucleotide probes on microarrays.
Biophysical journal Jul, 2005 | Pubmed ID: 15834006
Base pair interactions and hybridization isotherms of matched and mismatched oligonucleotide probes on microarrays.
Langmuir : the ACS journal of surfaces and colloids Sep, 2005 | Pubmed ID: 16171364
"Hook"-calibration of GeneChip-microarrays: chip characteristics and expression measures.
Algorithms for molecular biology : AMB , 2008 | Pubmed ID: 18759984
"Hook"-calibration of GeneChip-microarrays: theory and algorithm.
Algorithms for molecular biology : AMB , 2008 | Pubmed ID: 18759985
Globally optimal stitching of tiled 3D microscopic image acquisitions.
Bioinformatics (Oxford, England) Jun, 2009 | Pubmed ID: 19346324
Calibration of microarray gene-expression data.
Methods in molecular biology (Clifton, N.J.) , 2010 | Pubmed ID: 19882273
Software for bead-based registration of selective plane illumination microscopy data.
Nature methods Jun, 2010 | Pubmed ID: 20508634
Planar cell polarity signalling regulates cell adhesion properties in progenitors of the zebrafish laterality organ.
Development (Cambridge, England) Oct, 2010 | Pubmed ID: 20843857
An integrated micro- and macroarchitectural analysis of the Drosophila brain by computer-assisted serial section electron microscopy.
PLoS biology , 2010 | Pubmed ID: 20957184
Global analysis of nascent RNA reveals transcriptional pausing in terminal exons.
Molecular cell Nov, 2010 | Pubmed ID: 21095587
Gene expression divergence recapitulates the developmental hourglass model.
Nature Dec, 2010 | Pubmed ID: 21150996
Restoration of uneven illumination in light sheet microscopy images.
Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada Aug, 2011 | Pubmed ID: 21682937
TrakEM2 software for neural circuit reconstruction.
PloS one , 2012 | Pubmed ID: 22723842
Fiji: an open-source platform for biological-image analysis.
Nature methods Jul, 2012 | Pubmed ID: 22743772
ImgLib2--generic image processing in Java.
Bioinformatics (Oxford, England) Nov, 2012 | Pubmed ID: 22962343
OpenSPIM: an open-access light-sheet microscopy platform.
Nature methods Jul, 2013 | Pubmed ID: 23749304
Bioimage Informatics in the context of Drosophila research.
Methods (San Diego, Calif.) Jun, 2014 | Pubmed ID: 24732429
Efficient Bayesian-based multiview deconvolution.
Nature methods Jun, 2014 | Pubmed ID: 24747812
Nuclear accessibility of β-actin mRNA is measured by 3D single-molecule real-time tracking.
The Journal of cell biology May, 2015 | Pubmed ID: 26008747
BigDataViewer: visualization and processing for large image data sets.
Nature methods Jun, 2015 | Pubmed ID: 26020499
An automated workflow for parallel processing of large multiview SPIM recordings.
Bioinformatics (Oxford, England) Dec, 2015 | Pubmed ID: 26628585
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