Center for Imaging Science,
Institute for Computational Medicine,
Department of Applied Mathematics and Statistics
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On the metrics and euler-lagrange equations of computational anatomy.
Annual review of biomedical engineering , 2002 | Pubmed ID: 12117763
Clutter invariant ATR.
IEEE transactions on pattern analysis and machine intelligence May, 2005 | Pubmed ID: 15875803
Ex vivo 3D diffusion tensor imaging and quantification of cardiac laminar structure.
Magnetic resonance in medicine Oct, 2005 | Pubmed ID: 16149057
Large deformation diffeomorphic metric mapping of vector fields.
IEEE transactions on medical imaging Sep, 2005 | Pubmed ID: 16156359
Evidence of structural remodeling in the dyssynchronous failing heart.
Circulation research Jan, 2006 | Pubmed ID: 16339482
Combining geodesic interpolating splines and affine transformations.
IEEE transactions on image processing : a publication of the IEEE Signal Processing Society May, 2006 | Pubmed ID: 16671292
Large deformation diffeomorphism and momentum based hippocampal shape discrimination in dementia of the Alzheimer type.
IEEE transactions on medical imaging Apr, 2007 | Pubmed ID: 17427733
Combining anatomical manifold information via diffeomorphic metric mappings for studying cortical thinning of the cingulate gyrus in schizophrenia.
NeuroImage Sep, 2007 | Pubmed ID: 17613251
Parallel transport in diffeomorphisms distinguishes the time-dependent pattern of hippocampal surface deformation due to healthy aging and the dementia of the Alzheimer's type.
NeuroImage Mar, 2008 | Pubmed ID: 18249009
Quantitative cortical mapping of fractional anisotropy in developing rat brains.
The Journal of neuroscience : the official journal of the Society for Neuroscience Feb, 2008 | Pubmed ID: 18256263
Bayesian template estimation in computational anatomy.
NeuroImage Aug, 2008 | Pubmed ID: 18514544
Landmark-referenced voxel-based analysis of diffusion tensor images of the brainstem white matter tracts: application in patients with middle cerebral artery stroke.
NeuroImage Feb, 2009 | Pubmed ID: 18852056
Time sequence diffeomorphic metric mapping and parallel transport track time-dependent shape changes.
NeuroImage Mar, 2009 | Pubmed ID: 19041947
Evolutions equations in computational anatomy.
NeuroImage Mar, 2009 | Pubmed ID: 19059343
Computational method for identifying and quantifying shape features of human left ventricular remodeling.
Annals of biomedical engineering Jun, 2009 | Pubmed ID: 19322659
Multi-contrast large deformation diffeomorphic metric mapping for diffusion tensor imaging.
NeuroImage Aug, 2009 | Pubmed ID: 19398016
Neuroanatomical asymmetry patterns in individuals with schizophrenia and their non-psychotic siblings.
NeuroImage Oct, 2009 | Pubmed ID: 19481156
Transport of Relational Structures in Groups of Diffeomorphisms.
Journal of mathematical imaging and vision Sep, 2008 | Pubmed ID: 19809583
DIFFEOMORPHIC SURFACE FLOWS: A NOVEL METHOD OF SURFACE EVOLUTION.
SIAM journal on applied mathematics Jan, 2008 | Pubmed ID: 20016768
Cardiac Motion Analysis in Ischemic and Non-Ischemic Cardiomyopathy Using Parallel Transport.
Proceedings / IEEE International Symposium on Biomedical Imaging: from nano to macro. IEEE International Symposium on Biomedical Imaging Jun, 2009 | Pubmed ID: 20119497
Large Deformation Diffeomorphic Metric Curve Mapping.
International journal of computer vision Dec, 2008 | Pubmed ID: 20419045
Diffeomorphic Matching of Diffusion Tensor Images.
Proceedings. IEEE Computer Society Conference on Computer Vision and Pattern Recognition Jul, 2006 | Pubmed ID: 20711423
DIFFEOMORPHIC ACTIVE CONTOURS.
SIAM journal on imaging sciences , | Pubmed ID: 20814568
A comprehensive statistical model for cell signaling.
IEEE/ACM transactions on computational biology and bioinformatics May-Jun, 2011 | Pubmed ID: 20855924
A bayesian generative model for surface template estimation.
International journal of biomedical imaging , 2010 | Pubmed ID: 20885934
Whole brain diffeomorphic metric mapping via integration of sulcal and gyral curves, cortical surfaces, and images.
NeuroImage May, 2011 | Pubmed ID: 21281722
Multi-modal MRI analysis with disease-specific spatial filtering: initial testing to predict mild cognitive impairment patients who convert to Alzheimer's disease.
Frontiers in neurology , 2011 | Pubmed ID: 21904533
Principal component based diffeomorphic surface mapping.
IEEE transactions on medical imaging Feb, 2012 | Pubmed ID: 21937344
Diffuse abnormality of low to moderately organized white matter in schizophrenia.
Brain connectivity , 2011 | Pubmed ID: 22500774
Learning multivariate distributions by competitive assembly of marginals.
IEEE transactions on pattern analysis and machine intelligence Feb, 2013 | Pubmed ID: 22529323
Regionally selective atrophy of subcortical structures in prodromal HD as revealed by statistical shape analysis.
Human brain mapping Mar, 2014 | Pubmed ID: 23281100
Left-ventricular shape analysis for predicting sudden cardiac death risk.
Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference , 2012 | Pubmed ID: 23366821
Robust Diffeomorphic Mapping via Geodesically Controlled Active Shapes.
International journal of biomedical imaging , 2013 | Pubmed ID: 23690757
Laplace Beltrami Filter on QuadEdge Meshes.
The insight journal Jul, 2011 | Pubmed ID: 23875180
Identification of direction in gene networks from expression and methylation.
BMC systems biology Nov, 2013 | Pubmed ID: 24182195
The diffeomorphometry of temporal lobe structures in preclinical Alzheimer's disease.
NeuroImage. Clinical , 2013 | Pubmed ID: 24363990
Shape abnormalities of subcortical and ventricular structures in mild cognitive impairment and Alzheimer's disease: detecting, quantifying, and predicting.
Human brain mapping Aug, 2014 | Pubmed ID: 24443091
A metamorphosis distance for embryonic cardiac action potential interpolation and classification.
Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention , 2013 | Pubmed ID: 24505700
Principal Components Analysis of Scalar, Vector, and Mesh Vertex Data.
The insight journal Jan, 2012 | Pubmed ID: 24588002
Diffeomorphometry and geodesic positioning systems for human anatomy.
Technology Mar, 2014 | Pubmed ID: 24904924
Amygdala Atrophy in MCI/Alzheimer's Disease in the BIOCARD cohort based on Diffeomorphic Morphometry.
Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention Oct, 2012 | Pubmed ID: 24955432
Imaging the evolution of reactivation pulmonary tuberculosis in mice using 18F-FDG PET.
Journal of nuclear medicine : official publication, Society of Nuclear Medicine Oct, 2014 | Pubmed ID: 25082854
Inferring changepoint times of medial temporal lobe morphometric change in preclinical Alzheimer's disease.
NeuroImage. Clinical , 2014 | Pubmed ID: 25101236
Baseline shape diffeomorphometry patterns of subcortical and ventricular structures in predicting conversion of mild cognitive impairment to Alzheimer's disease.
Journal of Alzheimer's disease : JAD , 2015 | Pubmed ID: 25318546
An argument for mechanism-based statistical inference in cancer.
Human genetics May, 2015 | Pubmed ID: 25381197
Amygdalar atrophy in symptomatic Alzheimer's disease based on diffeomorphometry: the BIOCARD cohort.
Neurobiology of aging Jan, 2015 | Pubmed ID: 25444602
Estimating dense cardiac 3D motion using sparse 2D tagged MRI cross-sections.
Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference , 2014 | Pubmed ID: 25571140
The diffeomorphometry of regional shape change rates and its relevance to cognitive deterioration in mild cognitive impairment and Alzheimer's disease.
Human brain mapping Jun, 2015 | Pubmed ID: 25644981
Visual Turing test for computer vision systems.
Proceedings of the National Academy of Sciences of the United States of America Mar, 2015 | Pubmed ID: 25755262
Morphometry of the amygdala in schizophrenia and psychotic bipolar disorder.
Schizophrenia research May, 2015 | Pubmed ID: 25766598
Relationship of medial temporal lobe atrophy, APOE genotype, and cognitive reserve in preclinical Alzheimer's disease.
Human brain mapping Jul, 2015 | Pubmed ID: 25879865
Template Registration with Missing Parts: Application to the Segmentation of M. Tuberculosis Infected Lungs.
Proceedings. IEEE International Symposium on Biomedical Imaging Jun-Jul, 2009 | Pubmed ID: 26146531
Incorporating User Input in Template-Based Segmentation.
Proceedings. IEEE International Symposium on Biomedical Imaging Mar-Apr, 2011 | Pubmed ID: 26146532
Network Neurodegeneration in Alzheimer's Disease via MRI Based Shape Diffeomorphometry and High-Field Atlasing.
Frontiers in bioengineering and biotechnology , 2015 | Pubmed ID: 26284236
Hamiltonian Systems and Optimal Control in Computational Anatomy: 100 Years Since D'Arcy Thompson.
Annual review of biomedical engineering , 2015 | Pubmed ID: 26643025
Shape analysis of hypertrophic and hypertensive heart disease using MRI-based 3D surface models of left ventricular geometry.
Medical image analysis Apr, 2016 | Pubmed ID: 26766206
Linking white matter and deep gray matter alterations in premanifest Huntington disease.
NeuroImage. Clinical , 2016 | Pubmed ID: 27104139
Parametric Surface Diffeomorphometry for Low Dimensional Embeddings of Dense Segmentations and Imagery.
IEEE transactions on pattern analysis and machine intelligence Jun, 2017 | Pubmed ID: 27295651
Mapping the order and pattern of brain structural MRI changes using change-point analysis in premanifest Huntington's disease.
Human brain mapping Oct, 2017 | Pubmed ID: 28657159
Digitizing omics profiles by divergence from a baseline.
Proceedings of the National Academy of Sciences of the United States of America May, 2018 | Pubmed ID: 29666255
Computational anatomy and diffeomorphometry: A dynamical systems model of neuroanatomy in the soft condensed matter continuum.
Wiley interdisciplinary reviews. Systems biology and medicine Jun, 2018 | Pubmed ID: 29862670
Dan Wu1,
Andreia V. Faria1,
Laurent Younes2,3,4,
Christopher A. Ross5,
Susumu Mori1,6,
Michael I. Miller2,3,7
1The Russell H. Morgan Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine,
2Center for Imaging Science, Johns Hopkins University,
3Institute for Computational Medicine, Johns Hopkins University,
4Department of Applied Mathematics and Statistics, Johns Hopkins University,
5Division of Neurobiology, Departments of Psychiatry, Neurology, Neuroscience and Pharmacology, and Program in Cellular and Molecular Medicine, Johns Hopkins University School of Medicine,
6F.M. Kirby Research Center for Functional Brain Imaging, Kennedy Krieger Institute,
7Department of Biomedical Engineering, Johns Hopkins University
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