Department of Chemical Engineering
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Role of feedback and network architecture in controlling virulence gene expression in Bordetella.
Molecular bioSystems Nov, 2013 | Pubmed ID: 24056999
Mathematical model of flagella gene expression dynamics in Salmonella enterica serovar typhimurium.
Systems and synthetic biology Jun, 2015 | Pubmed ID: 25972986
Control of MarRAB Operon in Escherichia coli via Autoactivation and Autorepression.
Biophysical journal Oct, 2015 | Pubmed ID: 26445450
Revisiting demand rules for gene regulation.
Molecular bioSystems Feb, 2016 | Pubmed ID: 26627179
MarRA, SoxSR, and Rob encode a signal dependent regulatory network in Escherichia coli.
Molecular bioSystems May, 2016 | Pubmed ID: 27098660
Analysis of the optimality of the standard genetic code.
Molecular bioSystems Jul, 2016 | Pubmed ID: 27327359
Analysis of a strategy for cooperating cells to survive the presence of cheaters.
Molecular bioSystems Oct, 2016 | Pubmed ID: 27754502
Optimal parameter values for the control of gene regulation.
Molecular bioSystems Mar, 2017 | Pubmed ID: 28271105
Robustness versus evolvability analysis for regulatory feed-forward loops.
Journal of bioinformatics and computational biology Dec, 2017 | Pubmed ID: 29157072
Logic of two antagonizing intra-species quorum sensing systems in bacteria.
Bio Systems Mar, 2018 | Pubmed ID: 29407383
Dynamics and Control of Flagella Assembly in .
Frontiers in cellular and infection microbiology , 2018 | Pubmed ID: 29473025
Mathematical modeling of movement on fitness landscapes.
BMC systems biology Feb, 2019 | Pubmed ID: 30819150
Phenomenological models as effective tools to discover cellular design principles.
Archives of microbiology Apr, 2019 | Pubmed ID: 30826848
Distribution of fitness effects of mutations obtained from a simple genetic regulatory network model.
Scientific reports Jul, 2019 | Pubmed ID: 31285500
Evolution of Escherichia coli in different carbon environments for 2,000 generations.
Journal of evolutionary biology Dec, 2019 | Pubmed ID: 31397932
Phenotypic Heterogeneity in Tumor Progression, and Its Possible Role in the Onset of Cancer.
Frontiers in genetics , 2020 | Pubmed ID: 33329751
Experimental Evolution of Anticipatory Regulation in .
Frontiers in microbiology , 2021 | Pubmed ID: 35087497
GAL Regulon in the Yeast is Highly Evolvable Acquisition in the Coding Regions of the Regulatory Elements of the Network.
Frontiers in molecular biosciences , 2022 | Pubmed ID: 35372523
Selection in a growing colony biases results of mutation accumulation experiments.
Scientific reports Sep, 2022 | Pubmed ID: 36104390
Public good-driven release of heterogeneous resources leads to genotypic diversification of an isogenic yeast population.
Evolution; international journal of organic evolution Oct, 2022 | Pubmed ID: 36181481
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