A Bioinformatics Pipeline to Accurately and Efficiently Analyze the MicroRNA Transcriptomes in Plants

Please note that all translations are AI generated. Click here for the English version.

8.2K Views

•

06:34 min

•

January 21st, 2020

DOI :

10.3791/59864-v

January 21st, 2020

•

Ying Wang*¹^,², Zheng Kuang*¹^,², Lei Li², Xiaozeng Yang¹

¹Beijing Key Laboratory of Agricultural Genetic Resources and Biotechnology, Beijing Agro-Biotechnology Research Center, Beijing Academy of Agriculture and Forestry Sciences, ²State Key Laboratory of Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences, School of Advanced Agricultural Sciences and School of Life Sciences, Peking University

Podsumowanie

Przeglądaj więcej filmów

Bioinformatics Pipeline

MiRDeep2

Plant MicroRNAs

Transcriptional Regulation

Environmental Challenges

MicroRNA Annotation

Scoring Algorithm

Genome Reference Index

Arabidopsis Thaliana

Sequencing File

Noncoding RNA Reference Index

Rozdziały w tym wideo

0:04

Title

1:15

Installation and Testing

2:56

Identifying Novel MicroRNAs (miRNAs)

3:33

Reference Index Building

4:42

Results: Representative miRDP2 Performance

5:45

Conclusion

Powiązane Filmy

08:48

Peptide-derived Method to Transport Genes and Proteins Across Cellular and Organellar Barriers in Plants

10.5K Views

09:45

Detection of Copy Number Alterations Using Single Cell Sequencing

11.5K Views

06:51

Systemic Delivery of MicroRNA Using Recombinant Adeno-associated Virus Serotype 9 to Treat Neuromuscular Diseases in Rodents

7.5K Views

07:59

An Optogenetic Method to Control and Analyze Gene Expression Patterns in Cell-to-cell Interactions

7.6K Views

09:34

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease

33.3K Views

08:37

A Rapid and Facile Pipeline for Generating Genomic Point Mutants in C. elegans Using CRISPR/Cas9 Ribonucleoproteins

7.5K Views

11:58

Using In Vitro and In-cell SHAPE to Investigate Small Molecule Induced Pre-mRNA Structural Changes

8.2K Views

08:33

Characterizing Histone Post-translational Modification Alterations in Yeast Neurodegenerative Proteinopathy Models

7.4K Views

11:25

Enhanced Yeast One-hybrid Screens To Identify Transcription Factor Binding To Human DNA Sequences

7.8K Views

11:04

RNA Next-Generation Sequencing and a Bioinformatics Pipeline to Identify Expressed LINE-1s at the Locus-Specific Level

9.8K Views