Biological Sciences Division,
Integrative Omics,
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Phosphoprotein isotope-coded solid-phase tag approach for enrichment and quantitative analysis of phosphopeptides from complex mixtures.
Analytical chemistry Oct, 2003 | Pubmed ID: 14714534
High-throughput comparative proteome analysis using a quantitative cysteinyl-peptide enrichment technology.
Analytical chemistry Sep, 2004 | Pubmed ID: 15362891
Simultaneous monitoring of Zn2+ secretion and intracellular Ca2+ from islets and islet cells by fluorescence microscopy.
BioTechniques Dec, 2004 | Pubmed ID: 15597541
Comparative proteome analyses of human plasma following in vivo lipopolysaccharide administration using multidimensional separations coupled with tandem mass spectrometry.
Proteomics Feb, 2005 | Pubmed ID: 15627965
Targeted comparative proteomics by liquid chromatography-tandem Fourier ion cyclotron resonance mass spectrometry.
Analytical chemistry Jan, 2005 | Pubmed ID: 15649034
Probability-based evaluation of peptide and protein identifications from tandem mass spectrometry and SEQUEST analysis: the human proteome.
Journal of proteome research Jan-Feb, 2005 | Pubmed ID: 15707357
Improved proteome coverage by using high efficiency cysteinyl peptide enrichment: the human mammary epithelial cell proteome.
Proteomics Apr, 2005 | Pubmed ID: 15742320
Quantitative proteome analysis of human plasma following in vivo lipopolysaccharide administration using 16O/18O labeling and the accurate mass and time tag approach.
Molecular & cellular proteomics : MCP May, 2005 | Pubmed ID: 15753121
High-throughput proteomics using Fourier transform ion cyclotron resonance mass spectrometry.
Expert review of proteomics Jun, 2004 | Pubmed ID: 15966802
Utilizing human blood plasma for proteomic biomarker discovery.
Journal of proteome research Jul-Aug, 2005 | Pubmed ID: 16083256
Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry.
Journal of proteome research Nov-Dec, 2005 | Pubmed ID: 16335952
Development and evaluation of a micro- and nanoscale proteomic sample preparation method.
Journal of proteome research Nov-Dec, 2005 | Pubmed ID: 16335993
Advances in proteomics data analysis and display using an accurate mass and time tag approach.
Mass spectrometry reviews May-Jun, 2006 | Pubmed ID: 16429408
Normalization approaches for removing systematic biases associated with mass spectrometry and label-free proteomics.
Journal of proteome research Feb, 2006 | Pubmed ID: 16457593
Characterization of the mouse brain proteome using global proteomic analysis complemented with cysteinyl-peptide enrichment.
Journal of proteome research Feb, 2006 | Pubmed ID: 16457602
High dynamic range characterization of the trauma patient plasma proteome.
Molecular & cellular proteomics : MCP Oct, 2006 | Pubmed ID: 16684767
Endogenously nitrated proteins in mouse brain: links to neurodegenerative disease.
Biochemistry Jul, 2006 | Pubmed ID: 16800626
Evaluation of multiprotein immunoaffinity subtraction for plasma proteomics and candidate biomarker discovery using mass spectrometry.
Molecular & cellular proteomics : MCP Nov, 2006 | Pubmed ID: 16854842
Advances and challenges in liquid chromatography-mass spectrometry-based proteomics profiling for clinical applications.
Molecular & cellular proteomics : MCP Oct, 2006 | Pubmed ID: 16887931
Characterization of the human pancreatic islet proteome by two-dimensional LC/MS/MS.
Journal of proteome research Dec, 2006 | Pubmed ID: 17137336
Spatial mapping of protein abundances in the mouse brain by voxelation integrated with high-throughput liquid chromatography-mass spectrometry.
Genome research Mar, 2007 | Pubmed ID: 17255552
Quantitative proteomic approaches for studying phosphotyrosine signaling.
Expert review of proteomics Feb, 2007 | Pubmed ID: 17288512
The use of a quantitative cysteinyl-peptide enrichment technology for high-throughput quantitative proteomics.
Methods in molecular biology (Clifton, N.J.) , 2007 | Pubmed ID: 17484113
Quantitative analysis of human immunodeficiency virus type 1-infected CD4+ cell proteome: dysregulated cell cycle progression and nuclear transport coincide with robust virus production.
Journal of virology Jul, 2007 | Pubmed ID: 17494070
Profiling signaling polarity in chemotactic cells.
Proceedings of the National Academy of Sciences of the United States of America May, 2007 | Pubmed ID: 17494752
A method for selective enrichment and analysis of nitrotyrosine-containing peptides in complex proteome samples.
Journal of proteome research Jun, 2007 | Pubmed ID: 17497906
A genome-scale map of expression for a mouse brain section obtained using voxelation.
Physiological genomics Aug, 2007 | Pubmed ID: 17504947
Accurate mass measurements in proteomics.
Chemical reviews Aug, 2007 | Pubmed ID: 17649984
Capillary-based multi nanoelectrospray emitters: improvements in ion transmission efficiency and implementation with capillary reversed-phase LC-ESI-MS.
Analytical chemistry Jan, 2008 | Pubmed ID: 18044958
Application of proteomics in the discovery of candidate protein biomarkers in a diabetes autoantibody standardization program sample subset.
Journal of proteome research Feb, 2008 | Pubmed ID: 18092746
Elimination of systematic mass measurement errors in liquid chromatography-mass spectrometry based proteomics using regression models and a priori partial knowledge of the sample content.
Analytical chemistry Feb, 2008 | Pubmed ID: 18163597
Mitochondrial dysfunction, oxidative stress, and apoptosis revealed by proteomic and transcriptomic analyses of the striata in two mouse models of Parkinson's disease.
Journal of proteome research Feb, 2008 | Pubmed ID: 18173235
Proteome-wide identification of proteins and their modifications with decreased ambiguities and improved false discovery rates using unique sequence tags.
Analytical chemistry Mar, 2008 | Pubmed ID: 18271604
Quantitative proteome mapping of nitrotyrosines.
Methods in enzymology , 2008 | Pubmed ID: 18423218
DAnTE: a statistical tool for quantitative analysis of -omics data.
Bioinformatics (Oxford, England) Jul, 2008 | Pubmed ID: 18453552
Characterization of the mouse pancreatic islet proteome and comparative analysis with other mouse tissues.
Journal of proteome research Aug, 2008 | Pubmed ID: 18570455
Enhanced detection of low abundance human plasma proteins using a tandem IgY12-SuperMix immunoaffinity separation strategy.
Molecular & cellular proteomics : MCP Oct, 2008 | Pubmed ID: 18632595
Quantitative phosphoproteome analysis of lysophosphatidic acid induced chemotaxis applying dual-step (18)O labeling coupled with immobilized metal-ion affinity chromatography.
Journal of proteome research Oct, 2008 | Pubmed ID: 18785766
Large-scale multiplexed quantitative discovery proteomics enabled by the use of an (18)O-labeled "universal" reference sample.
Journal of proteome research Jan, 2009 | Pubmed ID: 19053531
A simple procedure for effective quenching of trypsin activity and prevention of 18O-labeling back-exchange.
Journal of proteome research May, 2009 | Pubmed ID: 19222237
Dual spatial maps of transcript and protein abundance in the mouse brain.
Expert review of proteomics Jun, 2009 | Pubmed ID: 19489697
An extensive survey of tyrosine phosphorylation revealing new sites in human mammary epithelial cells.
Journal of proteome research Aug, 2009 | Pubmed ID: 19534553
A statistical framework for protein quantitation in bottom-up MS-based proteomics.
Bioinformatics (Oxford, England) Aug, 2009 | Pubmed ID: 19535538
Mapping protein abundance patterns in the brain using voxelation combined with liquid chromatography and mass spectrometry.
Methods (San Diego, Calif.) Feb, 2010 | Pubmed ID: 19654045
Mouse-specific tandem IgY7-SuperMix immunoaffinity separations for improved LC-MS/MS coverage of the plasma proteome.
Journal of proteome research Nov, 2009 | Pubmed ID: 19722698
N-terminal enrichment: developing a protocol to detect specific proteolytic fragments.
Journal of biomolecular techniques : JBT Dec, 2009 | Pubmed ID: 19949699
Endogenous 3,4-dihydroxyphenylalanine and dopaquinone modifications on protein tyrosine: links to mitochondrially derived oxidative stress via hydroxyl radical.
Molecular & cellular proteomics : MCP Jun, 2010 | Pubmed ID: 20124354
Region-specific protein abundance changes in the brain of MPTP-induced Parkinson's disease mouse model.
Journal of proteome research Mar, 2010 | Pubmed ID: 20155936
Quantitative analysis of cell surface membrane proteins using membrane-impermeable chemical probe coupled with 18O labeling.
Journal of proteome research May, 2010 | Pubmed ID: 20380418
Enhanced sensitivity for selected reaction monitoring mass spectrometry-based targeted proteomics using a dual stage electrodynamic ion funnel interface.
Molecular & cellular proteomics : MCP Feb, 2011 | Pubmed ID: 20410378
Sensitive immunoassays of nitrated fibrinogen in human biofluids.
Talanta Jun, 2010 | Pubmed ID: 20441955
Shotgun proteomics identifies proteins specific for acute renal transplant rejection.
Proteomics. Clinical applications Jan, 2010 | Pubmed ID: 20543976
CD90/THY1 is overexpressed in prostate cancer-associated fibroblasts and could serve as a cancer biomarker.
Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc Oct, 2010 | Pubmed ID: 20562849
Plasma proteome response to severe burn injury revealed by 18O-labeled "universal" reference-based quantitative proteomics.
Journal of proteome research Sep, 2010 | Pubmed ID: 20698492
Clinical microfluidics for neutrophil genomics and proteomics.
Nature medicine Sep, 2010 | Pubmed ID: 20802500
Improved LC-MS/MS spectral counting statistics by recovering low-scoring spectra matched to confidently identified peptide sequences.
Journal of proteome research Nov, 2010 | Pubmed ID: 20812748
Trypsin-catalyzed oxygen-18 labeling for quantitative proteomics.
Methods in molecular biology (Clifton, N.J.) , 2011 | Pubmed ID: 21604114
Liquid chromatography-mass spectrometry-based quantitative proteomics.
The Journal of biological chemistry Jul, 2011 | Pubmed ID: 21632532
Identification of c-type heme-containing peptides using nonactivated immobilized metal affinity chromatography resin enrichment and higher-energy collisional dissociation.
Analytical chemistry Oct, 2011 | Pubmed ID: 21740036
Unraveling pancreatic islet biology by quantitative proteomics.
Expert review of proteomics Aug, 2011 | Pubmed ID: 21819304
IgY14 and SuperMix immunoaffinity separations coupled with liquid chromatography-mass spectrometry for human plasma proteomics biomarker discovery.
Methods (San Diego, Calif.) Feb, 2012 | Pubmed ID: 21925605
Quantitative proteomics analysis of adsorbed plasma proteins classifies nanoparticles with different surface properties and size.
Proteomics Dec, 2011 | Pubmed ID: 21956884
18O-labeled proteome reference as global internal standards for targeted quantification by selected reaction monitoring-mass spectrometry.
Molecular & cellular proteomics : MCP Dec, 2011 | Pubmed ID: 21988777
Mapping N-linked glycosylation sites in the secretome and whole cells of Aspergillus niger using hydrazide chemistry and mass spectrometry.
Journal of proteome research Jan, 2012 | Pubmed ID: 22136231
Simple sodium dodecyl sulfate-assisted sample preparation method for LC-MS-based proteomics applications.
Analytical chemistry Mar, 2012 | Pubmed ID: 22339560
Identification of phosphorylated butyrylcholinesterase in human plasma using immunoaffinity purification and mass spectrometry.
Analytica chimica acta Apr, 2012 | Pubmed ID: 22444575
Advancing the sensitivity of selected reaction monitoring-based targeted quantitative proteomics.
Proteomics Apr, 2012 | Pubmed ID: 22577010
Analysis of serum total and free PSA using immunoaffinity depletion coupled to SRM: correlation with clinical immunoassay tests.
Journal of proteomics Aug, 2012 | Pubmed ID: 22846433
Antibody-free, targeted mass-spectrometric approach for quantification of proteins at low picogram per milliliter levels in human plasma/serum.
Proceedings of the National Academy of Sciences of the United States of America Sep, 2012 | Pubmed ID: 22949669
In-source fragmentation and the sources of partially tryptic peptides in shotgun proteomics.
Journal of proteome research Feb, 2013 | Pubmed ID: 23268687
Quantitative Site-specific Reactivity Profiling of S-nitrosylation in Mouse Skeletal Muscle Using Cysteinyl Peptide Enrichment Coupled with Mass Spectrometry.
Free radical biology & medicine Dec, 2012 | Pubmed ID: 23277143
Liver-Derived Systemic Factors Drive β Cell Hyperplasia in Insulin-Resistant States.
Cell reports Jan, 2013 | Pubmed ID: 23375376
Synthesis and application of an environmentally insensitive Cy3-based arsenical fluorescent probe to identify adaptive microbial responses involving proximal dithiol oxidation.
Journal of the American Chemical Society Mar, 2013 | Pubmed ID: 23379730
Determination of burn patient outcome by large-scale quantitative discovery proteomics.
Critical care medicine Jun, 2013 | Pubmed ID: 23507713
Trauma-associated human neutrophil alterations revealed by comparative proteomics profiling.
Proteomics. Clinical applications Aug, 2013 | Pubmed ID: 23589343
Evaluation of selected binding domains for the analysis of ubiquitinated proteomes.
Journal of the American Society for Mass Spectrometry Aug, 2013 | Pubmed ID: 23649778
Targeted quantification of low ng/mL level proteins in human serum without immunoaffinity depletion.
Journal of proteome research Jul, 2013 | Pubmed ID: 23763644
Resin-assisted enrichment of N-terminal peptides for characterizing proteolytic processing.
Analytical chemistry Jul, 2013 | Pubmed ID: 23772796
Long-gradient separations coupled with selected reaction monitoring for highly sensitive, large scale targeted protein quantification in a single analysis.
Analytical chemistry Oct, 2013 | Pubmed ID: 24004026
Impact of alg3 gene deletion on growth, development, pigment production, protein secretion, and functions of recombinant Trichoderma reesei cellobiohydrolases in Aspergillus niger.
Fungal genetics and biology : FG & B Dec, 2013 | Pubmed ID: 24076077
A highly sensitive targeted mass spectrometric assay for quantification of AGR2 protein in human urine and serum.
Journal of proteome research Feb, 2014 | Pubmed ID: 24251762
Proteomic identification and quantification of S-glutathionylation in mouse macrophages using resin-assisted enrichment and isobaric labeling.
Free radical biology & medicine Feb, 2014 | Pubmed ID: 24333276
The identification of novel potential injury mechanisms and candidate biomarkers in renal allograft rejection by quantitative proteomics.
Molecular & cellular proteomics : MCP Feb, 2014 | Pubmed ID: 24335474
Resin-assisted enrichment of thiols as a general strategy for proteomic profiling of cysteine-based reversible modifications.
Nature protocols Jan, 2014 | Pubmed ID: 24336471
Optimization for peptide sample preparation for urine peptidomics.
Clinical proteomics Feb, 2014 | Pubmed ID: 24568099
High and low doses of ionizing radiation induce different secretome profiles in a human skin model.
PloS one , 2014 | Pubmed ID: 24642900
Detecting differential protein expression in large-scale population proteomics.
Bioinformatics (Oxford, England) Oct, 2014 | Pubmed ID: 24928210
Proteome-wide light/dark modulation of thiol oxidation in cyanobacteria revealed by quantitative site-specific redox proteomics.
Molecular & cellular proteomics : MCP Dec, 2014 | Pubmed ID: 25118246
A method to determine lysine acetylation stoichiometries.
International journal of proteomics , 2014 | Pubmed ID: 25143833
Expediting SRM assay development for large-scale targeted proteomics experiments.
Journal of proteome research Oct, 2014 | Pubmed ID: 25145539
Antibody-independent targeted quantification of TMPRSS2-ERG fusion protein products in prostate cancer.
Molecular oncology Oct, 2014 | Pubmed ID: 25266362
Brain insulin lowers circulating BCAA levels by inducing hepatic BCAA catabolism.
Cell metabolism Nov, 2014 | Pubmed ID: 25307860
Proteomic approaches for site-specific O-GlcNAcylation analysis.
Bioanalysis , 2014 | Pubmed ID: 25411699
Sensitive targeted quantification of ERK phosphorylation dynamics and stoichiometry in human cells without affinity enrichment.
Analytical chemistry Jan, 2015 | Pubmed ID: 25517423
Perturbations in the urinary exosome in transplant rejection.
Frontiers in medicine , 2014 | Pubmed ID: 25593928
Analytical platform evaluation for quantification of ERG in prostate cancer using protein and mRNA detection methods.
Journal of translational medicine Feb, 2015 | Pubmed ID: 25889691
Compensatory Islet Response to Insulin Resistance Revealed by Quantitative Proteomics.
Journal of proteome research Aug, 2015 | Pubmed ID: 26151086
Preserved DNA Damage Checkpoint Pathway Protects against Complications in Long-Standing Type 1 Diabetes.
Cell metabolism Aug, 2015 | Pubmed ID: 26244933
The clinical impact of recent advances in LC-MS for cancer biomarker discovery and verification.
Expert review of proteomics , 2016 | Pubmed ID: 26581546
The Measurement of Reversible Redox Dependent Post-translational Modifications and Their Regulation of Mitochondrial and Skeletal Muscle Function.
Frontiers in physiology , 2015 | Pubmed ID: 26635632
Quantitative Profiling of Protein S-Glutathionylation Reveals Redox-Dependent Regulation of Macrophage Function during Nanoparticle-Induced Oxidative Stress.
ACS nano Jan, 2016 | Pubmed ID: 26700264
SerpinB1 Promotes Pancreatic β Cell Proliferation.
Cell metabolism Jan, 2016 | Pubmed ID: 26701651
Recommendations for the Generation, Quantification, Storage, and Handling of Peptides Used for Mass Spectrometry-Based Assays.
Clinical chemistry Jan, 2016 | Pubmed ID: 26719571
SNaPP: Simplified Nanoproteomics Platform for Reproducible Global Proteomic Analysis of Nanogram Protein Quantities.
Endocrinology Mar, 2016 | Pubmed ID: 26745641
Using the CPTAC Assay Portal to Identify and Implement Highly Characterized Targeted Proteomics Assays.
Methods in molecular biology (Clifton, N.J.) , 2016 | Pubmed ID: 26867747
Contributions of immunoaffinity chromatography to deep proteome profiling of human biofluids.
Journal of chromatography. B, Analytical technologies in the biomedical and life sciences May, 2016 | Pubmed ID: 26868616
9-Fluorenylmethyl (Fm) Disulfides: Biomimetic Precursors for Persulfides.
Organic letters Mar, 2016 | Pubmed ID: 26870874
The current state of the art of quantitative phosphoproteomics and its applications to diabetes research.
Expert review of proteomics , 2016 | Pubmed ID: 26960075
Mining the human urine proteome for monitoring renal transplant injury.
Kidney international 06, 2016 | Pubmed ID: 27165815
Advances in targeted proteomics and applications to biomedical research.
Proteomics 08, 2016 | Pubmed ID: 27302376
Conservation of protein abundance patterns reveals the regulatory architecture of the EGFR-MAPK pathway.
Science signaling 07, 2016 | Pubmed ID: 27405981
An efficient method for native protein purification in the selected range from prostate cancer tissue digests.
Chinese clinical oncology Dec, 2016 | Pubmed ID: 28061542
Biodegradation of alkaline lignin by L1.
Biotechnology for biofuels , 2017 | Pubmed ID: 28239416
Quantitative proteomic characterization of redox-dependent post-translational modifications on protein cysteines.
Molecular bioSystems May, 2017 | Pubmed ID: 28357434
Targeted quantification of functional enzyme dynamics in environmental samples for microbially mediated biogeochemical processes.
Environmental microbiology reports Oct, 2017 | Pubmed ID: 28618201
Quantitative proteomics identifies altered O-GlcNAcylation of structural, synaptic and memory-associated proteins in Alzheimer's disease.
The Journal of pathology Sep, 2017 | Pubmed ID: 28657654
Targeted proteomic assays for quantitation of proteins identified by proteogenomic analysis of ovarian cancer.
Scientific data 07, 2017 | Pubmed ID: 28722704
Deep-Dive Targeted Quantification for Ultrasensitive Analysis of Proteins in Nondepleted Human Blood Plasma/Serum and Tissues.
Analytical chemistry Sep, 2017 | Pubmed ID: 28724286
Advances in microscale separations towards nanoproteomics applications.
Journal of chromatography. A Nov, 2017 | Pubmed ID: 28765000
Quantification of mutant SPOP proteins in prostate cancer using mass spectrometry-based targeted proteomics.
Journal of translational medicine Aug, 2017 | Pubmed ID: 28810879
Functional Enzyme-Based Approach for Linking Microbial Community Functions with Biogeochemical Process Kinetics.
Environmental science & technology Oct, 2017 | Pubmed ID: 28891285
-Nitrosylation inhibits the kinase activity of tomato phosphoinositide-dependent kinase 1 (PDK1).
The Journal of biological chemistry 12, 2017 | Pubmed ID: 28972151
LC-SRM-Based Targeted Quantification of Urinary Protein Biomarkers.
Methods in molecular biology (Clifton, N.J.) Nov, 2017 | Pubmed ID: 29116567
Multiplexed targeted mass spectrometry assays for prostate cancer-associated urinary proteins.
Oncotarget Nov, 2017 | Pubmed ID: 29254211
Nanodroplet processing platform for deep and quantitative proteome profiling of 10-100 mammalian cells.
Nature communications 02, 2018 | Pubmed ID: 29491378
Subnanogram proteomics: impact of LC column selection, MS instrumentation and data analysis strategy on proteome coverage for trace samples.
International journal of mass spectrometry Apr, 2018 | Pubmed ID: 29576737
Targeted Quantification of Phosphorylation Dynamics in the Context of EGFR-MAPK Pathway.
Analytical chemistry 04, 2018 | Pubmed ID: 29584399
Optimization for Peptide Sample Preparation for Urine Peptidomics.
Methods in molecular biology (Clifton, N.J.) Apr, 2018 | Pubmed ID: 29623538
Urinary Virome Perturbations in Kidney Transplantation.
Frontiers in medicine , 2018 | Pubmed ID: 29725592
Fatiguing contractions increase protein S-glutathionylation occupancy in mouse skeletal muscle.
Redox biology 07, 2018 | Pubmed ID: 29857311
Spatially Resolved Proteome Mapping of Laser Capture Microdissected Tissue with Automated Sample Transfer to Nanodroplets.
Molecular & cellular proteomics : MCP Sep, 2018 | Pubmed ID: 29941660
Mass spectrometry-based proteomics for system-level characterization of biological responses to engineered nanomaterials.
Analytical and bioanalytical chemistry Sep, 2018 | Pubmed ID: 29947897
Serum biomarkers for diagnosis and prediction of type 1 diabetes.
Translational research : the journal of laboratory and clinical medicine 11, 2018 | Pubmed ID: 30144424
Nanowell-mediated two-dimensional liquid chromatography enables deep proteome profiling of <1000 mammalian cells.
Chemical science Sep, 2018 | Pubmed ID: 30210768
Facile carrier-assisted targeted mass spectrometric approach for proteomic analysis of low numbers of mammalian cells.
Communications biology , 2018 | Pubmed ID: 30271983
Insulin receptor-mediated signaling regulates pluripotency markers and lineage differentiation.
Molecular metabolism 12, 2018 | Pubmed ID: 30316806
Nanoproteomics comes of age.
Expert review of proteomics 11, 2018 | Pubmed ID: 30375896
Proinsulin Secretion Is a Persistent Feature of Type 1 Diabetes.
Diabetes care 02, 2019 | Pubmed ID: 30530850
Carrier-Assisted Single-Tube Processing Approach for Targeted Proteomics Analysis of Low Numbers of Mammalian Cells.
Analytical chemistry 01, 2019 | Pubmed ID: 30557009
Improving mitochondrial function with SS-31 reverses age-related redox stress and improves exercise tolerance in aged mice.
Free radical biology & medicine 04, 2019 | Pubmed ID: 30597195
Genomics and biochemistry investigation on the metabolic pathway of milled wood and alkali lignin-derived aromatic metabolites of SP-35.
Biotechnology for biofuels , 2018 | Pubmed ID: 30603046
Boosting to Amplify Signal with Isobaric Labeling (BASIL) Strategy for Comprehensive Quantitative Phosphoproteomic Characterization of Small Populations of Cells.
Analytical chemistry May, 2019 | Pubmed ID: 30843680
Discovery of potential pathways for biological conversion of poplar wood into lipids by co-fermentation of strains.
Biotechnology for biofuels , 2019 | Pubmed ID: 30923568
Architecture and subunit arrangement of native AMPA receptors elucidated by cryo-EM.
Science (New York, N.Y.) 04, 2019 | Pubmed ID: 30975770
Response to Comment on Sims et al. Proinsulin Secretion Is a Persistent Feature of Type 1 Diabetes. Diabetes Care 2019;42:258-264.
Diabetes care 05, 2019 | Pubmed ID: 31010952
Stable Acinar Progenitor Cell Model Identifies Treacle-Dependent Radioresistance.
Radiation research 08, 2019 | Pubmed ID: 31141469
The role of proteomics in assessing beta-cell dysfunction and death in type 1 diabetes.
Expert review of proteomics 07, 2019 | Pubmed ID: 31232620
Automated Nanoflow Two-Dimensional Reversed-Phase Liquid Chromatography System Enables In-Depth Proteome and Phosphoproteome Profiling of Nanoscale Samples.
Analytical chemistry 08, 2019 | Pubmed ID: 31241912
Increased β-cell proliferation before immune cell invasion prevents progression of type 1 diabetes.
Nature metabolism May, 2019 | Pubmed ID: 31423480
High-Throughput Single Cell Proteomics Enabled by Multiplex Isobaric Labeling in a Nanodroplet Sample Preparation Platform.
Analytical chemistry 10, 2019 | Pubmed ID: 31509397
Comprehensive Proteomics Analysis of Stressed Human Islets Identifies GDF15 as a Target for Type 1 Diabetes Intervention.
Cell metabolism 02, 2020 | Pubmed ID: 31928885
A proteome-wide assessment of the oxidative stress paradigm for metal and metal-oxide nanomaterials in human macrophages.
NanoImpact Jan, 2020 | Pubmed ID: 32133426
Evaluation of the cytotoxic and cellular proteome impacts of food-grade TiO (E171) using simulated gastrointestinal digestions and a tri-culture small intestinal epithelial model.
NanoImpact Jan, 2020 | Pubmed ID: 32133427
Accurate Identification of Deamidation and Citrullination from Global Shotgun Proteomics Data Using a Dual-Search Delta Score Strategy.
Journal of proteome research 04, 2020 | Pubmed ID: 32175737
Development of Multiplexed Immuno-N-Terminomics to Reveal the Landscape of Proteolytic Processing in Early Embryogenesis of .
Analytical chemistry 04, 2020 | Pubmed ID: 32196314
Block Design with Common Reference Samples Enables Robust Large-Scale Label-Free Quantitative Proteome Profiling.
Journal of proteome research 07, 2020 | Pubmed ID: 32407631
Proteomic Tissue-Based Classifier for Early Prediction of Prostate Cancer Progression.
Cancers May, 2020 | Pubmed ID: 32429558
Late-life restoration of mitochondrial function reverses cardiac dysfunction in old mice.
eLife , | Pubmed ID: 32648542
Stochiometric quantification of the thiol redox proteome of macrophages reveals subcellular compartmentalization and susceptibility to oxidative perturbations.
Redox biology Sep, 2020 | Pubmed ID: 32750668
Near-Single-Cell Proteomics Profiling of the Proximal Tubular and Glomerulus of the Normal Human Kidney.
Frontiers in medicine , 2020 | Pubmed ID: 33072769
Protein thiol oxidation in the rat lung following e-cigarette exposure.
Redox biology Oct, 2020 | Pubmed ID: 33080441
Receptor-Driven ERK Pulses Reconfigure MAPK Signaling and Enable Persistence of Drug-Adapted BRAF-Mutant Melanoma Cells.
Cell systems Oct, 2020 | Pubmed ID: 33113355
Characterization of cellular oxidative stress response by stoichiometric redox proteomics.
American journal of physiology. Cell physiology 02, 2021 | Pubmed ID: 33264075
Enhancement of polyhydroxyalkanoate production by co-feeding lignin derivatives with glycerol in Pseudomonas putida KT2440.
Biotechnology for biofuels Jan, 2021 | Pubmed ID: 33413621
The Identification of Novel Potential Injury Mechanisms and Candidate Biomarkers in Renal Allograft Rejection by Quantitative Proteomics.
Molecular & cellular proteomics : MCP Feb, 2014 | Pubmed ID: 33498143
Corrigendum: Near-Single-Cell Proteomics Profiling of the Proximal Tubular and Glomerulus of the Normal Human Kidney.
Frontiers in medicine , 2020 | Pubmed ID: 33511148
Surfactant-assisted one-pot sample preparation for label-free single-cell proteomics.
Communications biology Mar, 2021 | Pubmed ID: 33649493
Defective insulin receptor signaling in hPSCs skews pluripotency and negatively perturbs neural differentiation.
The Journal of biological chemistry Mar, 2021 | Pubmed ID: 33667549
Stoichiometric Thiol Redox Proteomics for Quantifying Cellular Responses to Perturbations.
Antioxidants (Basel, Switzerland) Mar, 2021 | Pubmed ID: 33807006
Enhancing Top-Down Proteomics of Brain Tissue with FAIMS.
Journal of proteome research 05, 2021 | Pubmed ID: 33856812
Proteomic Profiling of the Substantia Nigra to Identify Determinants of Lewy Body Pathology and Dopaminergic Neuronal Loss.
Journal of proteome research 05, 2021 | Pubmed ID: 33900085
A Comprehensive Urine Proteome Database Generated From Patients With Various Renal Conditions and Prostate Cancer.
Frontiers in medicine , 2021 | Pubmed ID: 33928097
Altered β-Cell Prohormone Processing and Secretion in Type 1 Diabetes.
Diabetes May, 2021 | Pubmed ID: 33947721
Repetitive diacetyl vapor exposure promotes ubiquitin proteasome stress and precedes bronchiolitis obliterans pathology.
Archives of toxicology May, 2021 | Pubmed ID: 34031698
Meta-analysis of peptides to detect protein significance.
Statistics and its interface , 2020 | Pubmed ID: 34055134
Assessment of TMT Labeling Efficiency in Large-Scale Quantitative Proteomics: The Critical Effect of Sample pH.
ACS omega May, 2021 | Pubmed ID: 34056417
Kendall Martin1,
Tong Zhang1,
Pengfei Zhang2,
William B. Chrisler1,
Fillmore L. Thomas3,
Fen Liu4,
Tao Liu1,
Wei-Jun Qian1,
Richard D. Smith1,
Tujin Shi1
1Biological Sciences Division, Pacific Northwest National Laboratory,
2NHC Key Laboratory of Cancer Proteomics, Department of Oncology, Xiangya Hospital, Central South University,
3Environmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory,
4Department of Critical Care Medicine, The First Affiliated Hospital of Nanchang University
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