Biochemistry and Molecular Biology
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Structure and dynamic properties of nucleosome core particles.
FEBS letters Feb, 2005 | Pubmed ID: 15680970
p300-mediated tax transactivation from recombinant chromatin: histone tail deletion mimics coactivator function.
Molecular and cellular biology Jan, 2002 | Pubmed ID: 11739728
The essential histone variant H2A.Z regulates the equilibrium between different chromatin conformational states.
Nature structural biology Mar, 2002 | Pubmed ID: 11850638
Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution.
Journal of molecular biology Jun, 2002 | Pubmed ID: 12079350
Blocking transcription through a nucleosome with synthetic DNA ligands.
Journal of molecular biology Aug, 2002 | Pubmed ID: 12144782
The tail does not always wag the dog.
Nature genetics Oct, 2002 | Pubmed ID: 12244314
Crystal structures of nucleosome core particles in complex with minor groove DNA-binding ligands.
Journal of molecular biology Feb, 2003 | Pubmed ID: 12559907
Histone chaperones and nucleosome assembly.
Current opinion in structural biology Feb, 2003 | Pubmed ID: 12581654
Structure and dynamics of nucleosomal DNA.
Biopolymers Apr, 2003 | Pubmed ID: 12666179
Structure and dynamic behavior of nucleosomes.
Current opinion in genetics & development Apr, 2003 | Pubmed ID: 12672489
Tax recruitment of CBP/p300, via the KIX domain, reveals a potent requirement for acetyltransferase activity that is chromatin dependent and histone tail independent.
Molecular and cellular biology May, 2003 | Pubmed ID: 12724399
Preferential binding of the histone (H3-H4)2 tetramer by NAP1 is mediated by the amino-terminal histone tails.
The Journal of biological chemistry Nov, 2003 | Pubmed ID: 12928440
Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions.
The EMBO journal Jan, 2004 | Pubmed ID: 14739929
Reconstitution of nucleosome core particles from recombinant histones and DNA.
Methods in enzymology , 2004 | Pubmed ID: 14870657
A new fluorescence resonance energy transfer approach demonstrates that the histone variant H2AZ stabilizes the histone octamer within the nucleosome.
The Journal of biological chemistry Jun, 2004 | Pubmed ID: 15020582
Molecular recognition of the nucleosomal "supergroove".
Proceedings of the National Academy of Sciences of the United States of America May, 2004 | Pubmed ID: 15100411
Nucleosomes containing the histone variant H2A.Bbd organize only 118 base pairs of DNA.
The EMBO journal Aug, 2004 | Pubmed ID: 15257289
Structural determinants for generating centromeric chromatin.
Nature Jul, 2004 | Pubmed ID: 15282608
Defined structural changes occur in a nucleosome upon Amt1 transcription factor binding.
Journal of molecular biology Oct, 2004 | Pubmed ID: 15364568
Nucleosome assembly protein 1 exchanges histone H2A-H2B dimers and assists nucleosome sliding.
The Journal of biological chemistry Jan, 2005 | Pubmed ID: 15516689
H2A.Z alters the nucleosome surface to promote HP1alpha-mediated chromatin fiber folding.
Molecular cell Nov, 2004 | Pubmed ID: 15546624
Nucleosomes in solution exist as a mixture of twist-defect states.
Journal of molecular biology Jan, 2005 | Pubmed ID: 15567414
Nucleosome and chromatin fiber dynamics.
Current opinion in structural biology Apr, 2005 | Pubmed ID: 15837178
The temperature of flash-cooling has dramatic effects on the diffraction quality of nucleosome crystals.
Acta crystallographica. Section D, Biological crystallography Jul, 2005 | Pubmed ID: 15983411
The core histone N-terminal tail domains function independently and additively during salt-dependent oligomerization of nucleosomal arrays.
The Journal of biological chemistry Oct, 2005 | Pubmed ID: 16033758
Structural characterization of the histone variant macroH2A.
Molecular and cellular biology Sep, 2005 | Pubmed ID: 16107708
The structure of nucleosome assembly protein 1.
Proceedings of the National Academy of Sciences of the United States of America Jan, 2006 | Pubmed ID: 16432217
The nucleosomal surface as a docking station for Kaposi's sarcoma herpesvirus LANA.
Science (New York, N.Y.) Feb, 2006 | Pubmed ID: 16469929
Dynamic nucleosomes.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology , 2006 | Pubmed ID: 16506092
Kaposi's sarcoma-associated herpesvirus LANA hitches a ride on the chromosome.
Cell cycle (Georgetown, Tex.) May, 2006 | Pubmed ID: 16721045
The histone variant macro-H2A preferentially forms "hybrid nucleosomes".
The Journal of biological chemistry Sep, 2006 | Pubmed ID: 16803903
A feed-forward repression mechanism anchors the Sin3/histone deacetylase and N-CoR/SMRT corepressors on chromatin.
Molecular and cellular biology Jul, 2006 | Pubmed ID: 16809761
Nucleosome core particles containing a poly(dA.dT) sequence element exhibit a locally distorted DNA structure.
Journal of molecular biology Aug, 2006 | Pubmed ID: 16860337
Structure and function of nucleosome assembly proteins.
Biochemistry and cell biology = Biochimie et biologie cellulaire Aug, 2006 | Pubmed ID: 16936827
Effects of photochemically activated alkylating agents of the FR900482 family on chromatin.
Chemistry & biology May, 2007 | Pubmed ID: 17524986
Structure of the Drosophila nucleosome core particle highlights evolutionary constraints on the H2A-H2B histone dimer.
Proteins Apr, 2008 | Pubmed ID: 17957772
A charged and contoured surface on the nucleosome regulates chromatin compaction.
Nature structural & molecular biology Nov, 2007 | Pubmed ID: 17965723
A beta-hairpin comprising the nuclear localization sequence sustains the self-associated states of nucleosome assembly protein 1.
Journal of molecular biology Jan, 2008 | Pubmed ID: 18068721
Histone chaperones in nucleosome eviction and histone exchange.
Current opinion in structural biology Jun, 2008 | Pubmed ID: 18534842
A thermodynamic model for Nap1-histone interactions.
The Journal of biological chemistry Nov, 2008 | Pubmed ID: 18728017
The effect of H3K79 dimethylation and H4K20 trimethylation on nucleosome and chromatin structure.
Nature structural & molecular biology Oct, 2008 | Pubmed ID: 18794842
Histone chaperone specificity in Rtt109 activation.
Nature structural & molecular biology Sep, 2008 | Pubmed ID: 19172749
Nucleosome-binding affinity as a primary determinant of the nuclear mobility of the pioneer transcription factor FoxA.
Genes & development Apr, 2009 | Pubmed ID: 19339686
A positive spin on the centromere.
Cell Jul, 2009 | Pubmed ID: 19596232
Structural and biophysical studies of human PARP-1 in complex with damaged DNA.
Journal of molecular biology Feb, 2010 | Pubmed ID: 19962992
Methods to characterize the effect of DNA-modifying compounds on nucleosomal DNA.
Methods in molecular biology (Clifton, N.J.) , 2010 | Pubmed ID: 19997884
Structural characterization of H3K56Q nucleosomes and nucleosomal arrays.
Biochimica et biophysica acta May-Jun, 2010 | Pubmed ID: 20100606
Rise of the molecular machines.
Current opinion in structural biology Feb, 2010 | Pubmed ID: 20133121
The histone chaperone Nap1 promotes nucleosome assembly by eliminating nonnucleosomal histone DNA interactions.
Molecular cell Mar, 2010 | Pubmed ID: 20347425
Histone chaperones, histone acetylation, and the fluidity of the chromogenome.
Journal of cellular physiology Aug, 2010 | Pubmed ID: 20432449
The transcription factor Spn1 regulates gene expression via a highly conserved novel structural motif.
Journal of molecular biology Nov, 2010 | Pubmed ID: 20875428
Nucleosome accessibility governed by the dimer/tetramer interface.
Nucleic acids research Apr, 2011 | Pubmed ID: 21177647
A coupled equilibrium approach to study nucleosome thermodynamics.
Methods in enzymology , 2011 | Pubmed ID: 21195232
Biophysical analysis and small-angle X-ray scattering-derived structures of MeCP2-nucleosome complexes.
Nucleic acids research May, 2011 | Pubmed ID: 21278419
Nucleosome structure(s) and stability: variations on a theme.
Annual review of biophysics , 2011 | Pubmed ID: 21332355
The histone chaperone FACT: structural insights and mechanisms for nucleosome reorganization.
The Journal of biological chemistry May, 2011 | Pubmed ID: 21454601
The DEK oncoprotein is a Su(var) that is essential to heterochromatin integrity.
Genes & development Apr, 2011 | Pubmed ID: 21460035
The linker region of macroH2A promotes self-association of nucleosomal arrays.
The Journal of biological chemistry Jul, 2011 | Pubmed ID: 21532035
Structure and Scm3-mediated assembly of budding yeast centromeric nucleosomes.
Nature communications , 2011 | Pubmed ID: 21587230
Replacement of histone H3 with CENP-A directs global nucleosome array condensation and loosening of nucleosome superhelical termini.
Proceedings of the National Academy of Sciences of the United States of America Oct, 2011 | Pubmed ID: 21949362
Histone chaperone FACT coordinates nucleosome interaction through multiple synergistic binding events.
The Journal of biological chemistry Dec, 2011 | Pubmed ID: 21969370
Understanding histone acetyltransferase Rtt109 structure and function: how many chaperones does it take?
Current opinion in structural biology Dec, 2011 | Pubmed ID: 22023828
Fluorescence strategies for high-throughput quantification of protein interactions.
Nucleic acids research Mar, 2012 | Pubmed ID: 22121211
Proteins for packaging, partitioning, processing, and proofing of nucleic acids.
Current opinion in structural biology Feb, 2012 | Pubmed ID: 22261637
New insights into nucleosome and chromatin structure: an ordered state or a disordered affair?
Nature reviews. Molecular cell biology Jul, 2012 | Pubmed ID: 22722606
Alternative modes of binding of poly(ADP-ribose) polymerase 1 to free DNA and nucleosomes.
The Journal of biological chemistry Sep, 2012 | Pubmed ID: 22854955
Quantifying chromatin-associated interactions: the HI-FI system.
Methods in enzymology , 2012 | Pubmed ID: 22910210
Yeast CAF-1 assembles histone (H3-H4)2 tetramers prior to DNA deposition.
Nucleic acids research Nov, 2012 | Pubmed ID: 22941638
Structure of Actin-related protein 8 and its contribution to nucleosome binding.
Nucleic acids research Nov, 2012 | Pubmed ID: 22977180
Stability of nucleosomes containing homogenously ubiquitylated H2A and H2B prepared using semisynthesis.
Journal of the American Chemical Society Dec, 2012 | Pubmed ID: 23163596
Linker histone H1.0 interacts with an extensive network of proteins found in the nucleolus.
Nucleic acids research Feb, 2013 | Pubmed ID: 23435226
The role of the nucleosome acidic patch in modulating higher order chromatin structure.
Journal of the Royal Society, Interface / the Royal Society May, 2013 | Pubmed ID: 23446052
Evidence for monomeric actin function in INO80 chromatin remodeling.
Nature structural & molecular biology Apr, 2013 | Pubmed ID: 23524535
Histone chaperone FACT action during transcription through chromatin by RNA polymerase II.
Proceedings of the National Academy of Sciences of the United States of America May, 2013 | Pubmed ID: 23610384
Chaperone Nap1 Shields Histone Surfaces Used in a Nucleosome and Can Put H2A-H2B in an Unconventional Tetrameric Form.
Molecular cell Aug, 2013 | Pubmed ID: 23973327
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