Bu çalışma Tayvan Ulusal Bilim Konseyi grants- MGK 99-2320-B-007-005-my2 (CC) ve MGK 101-2628-E-007-011-My3 (CMC), ve Gaziler Genel kısmen desteklenmiştir Hastaneler ve Tayvan Ortak Araştırma Programı Üniversite Sistemi (CC).

Operasyon prosedürünün genel şeması Şekil 1&#39;de verilmiştir. Etik uygulamaları kullanarak, (sağlıklı bireylerde kan örnekleri toplandı ve İDD protokolleri onayladı Tayvan altında Taichung Gaziler General Hospital (TCVGH), Taichung aracılığıyla hastaların sulu mizah örnekleri elde KİK TCVGH No CF11213-1). Kağıt Cihazların İmalatı 1. <ol><li> 96 oyuklu bir mikrotitre plakası gibi aynı düzeni sağlamak için, çapı 5 mm olan daireler halinde kromatografi kağıdı kesin. Kayıtlı geçiş delikleri, ve laminat iki polistren levhalar ile bu kağıt parçalarını sandviç. </li><li> Aşağıdaki 28 adımları açıklanan kimyasal konjugasyon yöntemi kullanarak kağıt cihazları değiştirin. <ol><li> Bir plazma odasında oksijen plazmanın (100 mW, 1% oksijen, 30 sn) ile kağıt cihazları davranın. DİKKAT: 3-merkaptopropil trimetoksisilan ve N -γ-maleimidobutiriloksi sukkinimid ile çalışırken özel dikkat alınmalıdıresteri (GMBS), her ikisi de neme duyarlı ve zehirli olduğundan. Koruyucu eldiven giyin ve solumaktan kaçının veya deri ve göz ile temas. Sıkıca kapalı stok şişe tutun ve su yoğunlaşmasını önlemek için açmadan önce oda sıcaklığına gelmesini bekleyin. Seçenek olarak ise, bir azot doldurulmuş eldiven torbası ya da kutu içinde hazır şişe açın. Küçük şişelere içine kısım stok şişe sık açılmasını önlemek için. </li><li> Hemen 30 dakika süreyle etanol (200 proof) içinde 3-merkaptopropil-trimetoksi silan bir% 4 (hacim / hacim) çözeltide kağıt cihazları tedavi inkübe edin. </li><li> Etanol ile kağıt cihazları yıkayın ve 15 dakika boyunca etanol içerisinde 0.01 umol / ml GMBS ile inkübe edilir. </li><li> Etanol (200 proof) içinde yıkayın ve 4 ° C &#39;de 1 saat süre ile, fosfat tamponlu tuzlu su (PBS) içinde 10 ug / ml avidin çözeltisi ile kağıt cihazları inkübe edin. 4 ° C&#39;de muhafaza eğer ihtiyaç ve 4 hafta içinde kullanın. </li></ol></li><li> (BSA 10 ul PBS sığır serumu albümini (ağ / hac),% 1 ihtiva eden her kağıdı test bölgeleri Islak) 3 x 10 dakika için yakalama molekülü biyotinile edilmiş 10 ul tespit önce 3 x 10 dakika karıştırıldı. Veya anneksin V (01:20, anneksin V bağlanması tampon içinde hac / hac), anti-CD63 antikoru kullanarak (PBS ağırlık / hacim) BSA ve% 0.09 (a / h) sodyum azid (w% 1 ihtiva eden 20 ug / ml) yakalama molekülleri. </li><li> PBS sırasıyla, 3 x 1 dakika süreyle tampon çözeltileri bağlayıcı BSA veya anneksin V (ağ / hac),% 1 ihtiva eden tekabül eden 10 ul kullanılarak bağlanmamış anti-CD63 antikoru ya da bunun anneksin V molekülleri durulayın. </li></ol> 2. Serum ve Sulu Mizah Örnek Toplama ve İşleme <ol><li> Serum koleksiyon. <ol><li> Serum ayırma tüpleri Venipunktür periferik kan 10 ml toplayın ve hafifçe tüpü beş kez ters çevirin. Dikey konumda tüp ayarlama ve 30 dakika boyunca bekleyin. </li><li> 15 dakika boyunca 1.200 × g santrifüj. 30 dakika süre ile 3000 x g &#39;de daha temiz bir tüpe üst tabakadan serum, ve santrifüj aktarın. </li><li> 0.8 mikron fil ile süpernatant geçmekter. Kullanılana kadar -80 ° C&#39;de örnek tutun. </li></ol></li><li> Sulu mizah koleksiyonu: kullanana kadar -80 ° C&#39;de doğrudan prosedürler ve mağaza örnekleri invaziv aracılığıyla bir göz hekimi tarafından tanısı konulan hastalarda sulu mizah örnekleri toplamak. </li></ol> Ekstrasellüler Veziküller 3. İzolasyonu <ol><li> 5 ul / dakikalık bir oranda, her bir kağıt test bölgesi üzerine Noktası örnekler. </li><li> BSA veya anneksin V sırasıyla, anti-CD63 antikoru ya da bunun anneksin V molekülleri ile işlevselleştirilmiş kağıt cihazlar için 3 x 1 dakika süreyle tampon çözeltileri bağlanması (w / v) PBS,% 1 ihtiva eden tekabül eden 10 ul bağlanmamış EV&#39;lerini durulayın. Aşağıdaki mansap deneyler yapın. </li></ol> 4. Alt Analiz Örneği 1: Tarama Electromicrographs <ol><li> 10 dakika için 10 ul 0.5 × Karnovsky en fiksatif kullanarak Fonksiyonlu kağıt testi bölgesinde çekilen AGH Fix. </li><li> 2 × 5 dakika için yeterli PBS ile örnekleri durulayın. </li><li> Kurutmak10 dakika sonra 2 x 10 dakika boyunca% 50 etanol, 2 x 10 dakika boyunca% 70 etanol, 2 x 10 dakika boyunca% 95 etanol ve 4 x 10 dakika boyunca% 100 etanol daha sonra% 35 etanol ile örnekler. </li><li> Kuru Kritik ve kaplamaz paladyum / altın örnekleri sputter ve düşük elektron ivme geriliminde çalışan bir taramalı elektron mikroskobu kullanarak incelemek (~ 5 kV). </li></ol> 5. Aşağı Analiz Örneği 2: Paper-based ELISA <ol><li> 1 de, anti-CD9 birincil antikor ihtiva eden bir 5 ul çözeltisi ekleyin: 1000 seyreltme, PBS içinde yakalanan EV&#39;lerini ihtiva eden, her bir test bölgesine. 1 dakika bekleyin. </li><li> PBS 30 saniye boyunca 100 rpm&#39;de çalkalandı ml 30 ile örnekleri durulayın. </li><li> 5 ul çözüm içeren yaban turpu peroksidaz (HRP) 1 ikincil antikor -bağlanmış ekle: PBS 1.000 seyreltme ve 1 dakika bekleyin. </li><li> PBS 30 saniye boyunca 100 rpm&#39;de çalkalandı ml 30 ile örnekleri durulayın. </li><li> Hidrojen peroksit An 1 hacim oranı: 1 ihtiva eden bir 5 ul kolorimetrik alt-tabakanın eklemed 3,3 &#39;, 5,5&#39;-tetrametilbenzidin (TMB) ve bir masaüstü tarayıcı kullanarak tarayın. </li></ol> 6. Alt Analiz Örneği 3: RNA İzolasyon <ol><li> Yakalanan AGH parçalamak için bağlayıcı tampon / polivinilpirrolidon-tabanlı RNA izolasyonu yardımı 35 ul ve lizis 265 ul örnekleri daldırın. Vortex şiddetle. </li><li> Lizata izolasyon kiti sağlanan 30 ul Homojenat ekleyin. Vortex şiddetle ve 10 dakika süreyle buz koymak. </li><li> Aşağıdaki adımlarda tarif edilen asit, fenol-kloroform ayırıcısı kullanılarak RNA ekstrakte edin. <ol><li> Şişenin alt tabakasından fenol-kloroform 330 ul alın ve homojenat / lizat ekleyin. Vortex şiddetle. </li><li> 5 dakika boyunca 10,000 x g&#39;de santrifüjleyin. Temiz bir tüp sulu (üst) faz aktarın ve kaldırıldı hacmi not. </li></ol></li><li> Önceki adımda ve co uzaklaştırıldı, sulu faz 1.25 katı hacim hacim% 100 etanol ile total RNA çökeltilmesi95 ° C&#39;ye kadar ön ısıtmaya tabi elüsyon çözeltisi RNA&#39;yı llect. </li><li> Konsantre hale getirin ve bundan başka, imalatçının protokolüne göre bir RNA temizleme kiti kullanılarak RNA&#39;yı saflaştırmak. </li></ol>

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Yazarlar hiçbir rakip mali çıkarlarını olduğunu beyan ederim.

dışı keseciklerin alt başarılı izolasyonu için en kritik adımlar şunlardır: kağıt 1) iyi bir seçim; Kağıt liflerinin yüzeyi üzerinde yakalama moleküllerinin 2) sabit ve yüksek kapsamı; 3) Numunelerin doğru kullanımı; ve 4), genel laboratuar hijyen uygulaması. Gözenekli malzemeler, çok ucuz ve ekipman içermeyen deneylerde kullanılmıştır. Bu ayarlanabilir bir gözenek boyutu, çok yönlü özelliğe, düşük maliyet ve yüksek yüzey-hacim oranı, sıvıların p...

Extracellular vesicles (EVs) are heterogeneous membranous particles that range in size from 40 nm to 5,000 nm and are released actively by many cell types via different biogenesis routes1-9. They contain unique and selected subsets of DNA, RNA, proteins, and surface markers from parental cells. Their involvement in a variety of cellular processes, such as intercellular communication10, immunity modulation11, angiogenesis12, metastasis12, chemoresistance13, and the development of eye diseases9, is increasingly recognized and has spurred a great interest in their utility in diagnostic, prognostic, therapeutic, and basic biology applications.
EVs can be classically categorized as exosomes, microvesicles, apoptotic bodies, oncosomes, ectosomes, microparticles, telerosomes, prostatosomes, cardiosomes, and vexosomes, etc., based on their biogenesis or cellular origin. For example, exosomes are formed in multivesicular bodies, whereas microvesicles are generated by budding directly from plasma membrane and apoptotic vesicles are from apoptotic or necrotic cells. However, the nomenclature is still under refined, partly due to a lack of thorough understanding and characterization of EVs. Several methods have been developed to purify EVs, including ultracentrifugation14, ultrafiltration15, magnetic beads16, polymeric precipitation17-19, and microfluidic techniques20-22. The most common procedure to purify EVs involves a series of centrifugations and/or filtration to remove large debris and other cellular contaminants, followed by a final high-speed ultracentrifugation, a process that is expensive, tedious, and nonspecific14,23,24. Unfortunately, technological need for rapid and reliable isolation of EVs with satisfactory purity and efficiency is not yet met. 
We have developed a paper-based immunoaffinity device that provides a simple, time- and cost-saving, yet efficient way to isolate and characterize subgroups of EVs22. Cellulose paper cut into a defined shape can be arranged and laminated using two plastic sheets with registered through-holes. In contrast to the general strategy to define the fluid boundary in paper-based devices by printing hydrophobic wax or polymers25-27, these laminated paper patterns are resistant to many organic liquids, including ethanol. Paper test zones are chemically modified to provide stable and dense coverage of capture molecules (e.g., target-specific antibodies) that have high affinity to specific surface markers on EV subgroups. Biological samples can be pipetted directly onto the paper test zones, and purified EVs are retained after rinse steps. Characterization of isolated EVs can be performed by SEM, ELISA, and transcriptomic analysis.

<table border="0" cellpadding="0" cellspacing="0">
	<tbody>
		<tr>
			<td>Chromatography Paper</td>
			<td>GE Healthcare Life Sciences</td>
			<td>3001-861</td>
			<td>&#160;Whatman&#174; Grade 1 cellulose paper</td>
		</tr>
		<tr>
			<td>(3-Mercaptopropyl) trimethoxysilane</td>
			<td>Sigma Aldrich</td>
			<td>175617</td>
			<td>This chemical reacts with water and moisture and should be applied inside a nitrogen-filled glove bag. Avoid eye and skin contact. Do not breathe fumes or inhale vapors.</td>
		</tr>
		<tr>
			<td>Ethanol</td>
			<td>Fisher Scientific</td>
			<td>BP2818</td>
			<td>Absolute, 200 Proof, molecular biology grade</td>
		</tr>
		<tr>
			<td>Bovine serum albumin (BSA)</td>
			<td>BioShop Canada Inc.</td>
			<td>ALB001</td>
			<td>Often referred to as Cohn fraction V.</td>
		</tr>
		<tr>
			<td>N-g-maleimidobutyryloxy succinimide ester (GMBS)</td>
			<td>Pierce Biotechnology</td>
			<td>22309</td>
			<td>GMBS is an amine-to-sulfhydryl crosslinker. GMBS is moisture-sensitive.</td>
		</tr>
		<tr>
			<td>Avidin</td>
			<td>Pierce Biotechnology</td>
			<td>31000</td>
			<td>NeutrAvidin has 4 binding sites for biotin and its pI value is 6.3, which is more neutral than native avidin</td>
		</tr>
		<tr>
			<td>Biotinylated mouse anti-human anti-CD63</td>
			<td>Ancell</td>
			<td>215-030</td>
			<td>clone AHN16.1/46-4-5</td>
		</tr>
		<tr>
			<td>biotinylated annexin V</td>
			<td>BD Biosciences</td>
			<td>556418</td>
			<td>Annxin V has a high affinity for phosphotidylserine (PS)</td>
		</tr>
		<tr>
			<td>Primary anti-CD9 and secondary antibody</td>
			<td>System Biosciences</td>
			<td>EXOAB-CD9A-1</td>
			<td>The secondary antibody is horseradish peroxidise-conjugated</td>
		</tr>
		<tr>
			<td>Serum separation tubes</td>
			<td>BD Biosciences</td>
			<td>367991</td>
			<td>Clot activator and gel for serum separation</td>
		</tr>
		<tr>
			<td>Annexin V binding buffer</td>
			<td>BD Biosciences</td>
			<td>556454</td>
			<td>10X; dilute to 1X prior to use.</td>
		</tr>
		<tr>
			<td>TMB substrate reagent set</td>
			<td>BD Biosciences</td>
			<td>555214</td>
			<td>The set contains hydrogen peroxide and 3,3&#8217;,5,5&#8217;-tetramethylbenzidine (TMB)</td>
		</tr>
		<tr>
			<td>RNA isolation kit</td>
			<td>Life Technologies</td>
			<td>AM1560</td>
			<td>MirVana RNA isolation kit</td>
		</tr>
		<tr>
			<td>Polyvinylpyrrolidone-based RNA isolation aid</td>
			<td>Life Technologies</td>
			<td>AM9690</td>
			<td>Plant RNA isolation aid contains polyvinylpyrrolidone (PVP) that binds to polysaccharides.</td>
		</tr>
		<tr>
			<td>RNA cleanup kit</td>
			<td>Qiagen Inc.</td>
			<td>74004</td>
			<td>MinElute RNA cleanup kit is designed for purification of up to 45 &#956;g RNA.</td>
		</tr>
		<tr>
			<td>Plasma chamber</td>
			<td>March Instruments</td>
			<td>PX-250</td>
			<td></td>
		</tr>
		<tr>
			<td>Scanning electron microscope</td>
			<td>Hitachi Ltd.</td>
			<td>S-4300</td>
			<td></td>
		</tr>
		<tr>
			<td>Desktop scanner</td>
			<td>Hewlett-Packard Company</td>
			<td>Photosmart B110</td>
			<td>8-bit color images were captured. Cameras and smart phones may be also used.</td>
		</tr>
		<tr>
			<td>Image-record system</td>
			<td>J&#38;H Technology Co</td>
			<td>GeneSys G:BOX Chemi-XX8</td>
			<td>16-bit fluroscence images were captured. Fluroscence microscopes may be also used.</td>
		</tr>
	</tbody>
</table>

paper-based devices for isolation and characterization of extracellular vesicles

Ekstrasellüler veziküller (AGH), hücrelerin çeşitli salınan zar parçacıklar, klinik uygulamalar için büyük bir potansiyele sahip. Onlar nükleik asit ve protein kargo içeren ve giderek ökaryotun ve prokaryot hücreler hem tarafından kullanılan arası bir iletişim aracı olarak kabul edilmektedir. Bununla birlikte, küçük boyutları için, EV&#39;lerin izolasyonu için mevcut protokoller genellikle, zaman alıcıdır, zaman alıcıdır, ve bu, bir ultra santrifüj gibi büyük örnek hacimleri ve pahalı ekipman gerektirmektedir. Bu sınırlamaları gidermek için, biz, kolay, verimli ve 10 ul kadar düşük örnek hacimleri gerektiren EVs alt grupları ayırmak için kağıt tabanlı imünoafinite platformu geliştirdi. Biyolojik numuneler, kimyasal olarak belirli EV yüzey belirteçleri yüksek afiniteye sahip yakalama molekülü ile değiştirilmiş kağıdı test bölgeleri doğrudan pipetle edilebilir. Biz taramalı elektron mikroskobu (SEM) ile tahlil doğrulamak, kağıt-tabanlı enzim-bağlı immunosorbent tahlilleri (p-ELISA) ve transcriptome analizi. Bu kağıt-tabanlı cihazlar sağlık ve hastalık EV fonksiyonları anlayışımızı ilerletmek yardımcı klinik ve araştırma ortamında EVs çalışma sağlayacaktır.

EVs alt grupları izole kağıt cihazın yeteneği verimli EV yüzey belirteçlerinin onun duyarlı ve özgül tanıma dayanır. yakalama molekülü ile kağıt liflerinin stabil bir modifikasyonunun başka bir yerde tarif edildiği gibi 28-30 avidin-biyotin kimyası kullanılarak elde edilir. fiziksel adsorpsiyon yöntemi kimyasal birleşme etkinliği ve floresans bazlı Bilgilerini kullanılarak değerlendirilir. Kağıt test bölgeleri aşama 1.3&#39;de 20 ug / ml florofor R-fikoeritrin-konjüge biyotin-mo...

Watch this Scientific Journal Video about Paper-based Devices for Isolation and Characterization of Extracellular Vesicles at JoVE.com

Paper-based Devices for Isolation and Characterization of Extracellular Vesicles

Bu protokol, 10 kadar ul serum örneklerinden, hücre dışı veziküller (EVS), hücrelerden salınan küçük zar parçacıkları izole etmek için bir yöntem göstermektedir. Bu yaklaşım, ultra-santrifüj ihtiyacını önlediği deney süresi sadece birkaç dakika sürer ve sınırlı hacim örneklerinden EV&#39;lerin izolasyonunu sağlar.

Ekstrasellüler Veziküller Yalıtım ve Karakterizasyonu için kağıt tabanlı cihazlar

Extracellular vesicles (EVs), membranous particles released from various types of cells, hold a great potential for clinical applications. They contain ...

paper-based-devices-for-isolation-characterization-extracellular

Research

JoVE Journal

Bioengineering

11.3K Görüntüleme.  National Tsing Hua University.  Bu protokol, 10 kadar ul serum örneklerinden, hücre dışı veziküller (EVS), hücrelerden salınan küçük zar parçacıkları izole etmek için bir yöntem göstermektedir. Bu yaklaşım, ultra-santrifüj ihtiyacını önlediği deney süresi sadece birkaç dakika sürer ve sınırlı hacim örneklerinden EV'lerin izolasyonunu sağlar. 

Video: Paper-based Devices for Isolation and Characterization of Extracellular Vesicles

Quantification and Size-profiling of Extracellular Vesicles Using Tunable Resistive Pulse Sensing

Extracellular vesicles (EVs), including &#8216;microvesicles&#8217; and &#8216;exosomes&#8217;, are highly abundant in bodily fluids. Recent years have witnessed a tremendous increase in interest in EVs. EVs have been shown to play important roles in various physiological and pathological processes, including coagulation, immune responses, and cancer. In addition, EVs have potential as therapeutic agents, for instance as drug delivery vehicles or as regenerative medicine. Because of their small size (50 to 1,000 nm) accurate quantification and size profiling of EVs is technically challenging.
This protocol describes how tunable resistive pulse sensing (tRPS) technology, using the qNano system, can be used to determine the concentration and size of EVs. The method, which relies on the detection of EVs upon their transfer through a nano sized pore, is relatively fast, suffices the use of small sample volumes and does not require the purification and concentration of EVs. Next to the regular operation protocol an alternative approach is described using samples spiked with polystyrene beads of known size and concentration. This real-time calibration technique can be used to overcome technical hurdles encountered when measuring EVs directly in biological fluids.

Extracellular vesicles play important roles in physiological and pathological processes, including coagulation, immune responses, and cancer or as potential therapeutic agents in drug delivery or regenerative medicine. This protocol presents methods for the quantification and size characterization of isolated and non-isolated extracellular vesicles in various fluids using tunable resistive pulse sensing.

Sayımı ve Ayarlanabilir Dirençli Darbe Algılama Yöntemi Ekstrasellüler Veziküller boyutu-profil

Extracellular vesicles (EVs), including &#8216;microvesicles&#8217; and &#8216;exosomes&#8217;, are highly abundant in bodily fluids. Recent years have ...

Biyomühendislik

Fabrication of Three-dimensional Paper-based Microfluidic Devices for Immunoassays

Paper wicks fluids autonomously due to capillary action. By patterning paper with hydrophobic barriers, the transport of fluids can be controlled and directed within a layer of paper. Moreover, stacking multiple layers of patterned paper creates sophisticated three-dimensional microfluidic networks that can support the development of analytical and bioanalytical assays. Paper-based microfluidic devices are inexpensive, portable, easy to use, and require no external equipment to operate. As a result, they hold great promise as a platform for point-of-care diagnostics. In order to properly evaluate the utility and analytical performance of paper-based devices, suitable methods must be developed to ensure their manufacture is reproducible and at a scale that is appropriate for laboratory settings. In this manuscript, a method to fabricate a general device architecture that can be used for paper-based immunoassays is described. We use a form of additive manufacturing (multi-layer lamination) to prepare devices that comprise multiple layers of patterned paper and patterned adhesive. In addition to demonstrating the proper use of these three-dimensional paper-based microfluidic devices with an immunoassay for human chorionic gonadotropin (hCG), errors in the manufacturing process that may result in device failures are discussed. We expect this approach to manufacturing paper-based devices will find broad utility in the development of analytical applications designed specifically for limited-resource settings.

We detail a method to fabricate three-dimensional paper-based microfluidic devices for use in the development of immunoassays. Our approach to device assembly is a type of multilayer, additive manufacturing. We demonstrate a sandwich immunoassay to provide representative results for these types of paper-based devices.

İmmüno için üç boyutlu Paper-based mikroakışkan Cihazlar İmalat

Paper wicks fluids autonomously due to capillary action. By patterning paper with hydrophobic barriers, the transport of fluids can be controlled and ...

Detection of Endotoxin in Nano-formulations Using Limulus Amoebocyte Lysate (LAL) Assays

When present in pharmaceutical products, a Gram-negative bacterial cell wall component endotoxin (often also called lipopolysaccharide) can cause inflammation, fever, hypo- or hypertension, and, in extreme cases, can lead to tissue and organ damage that may become fatal. The amounts of endotoxin in pharmaceutical products, therefore, are strictly regulated. Among the methods available for endotoxin detection and quantification, the Limulus Amoebocyte Lysate (LAL) assay is commonly used worldwide. While any pharmaceutical product can interfere with the LAL assay, nano-formulations represent a particular challenge due to their complexity. The purpose of this paper is to provide a practical guide to researchers inexperienced in estimating endotoxins in engineered nanomaterials and nanoparticle-formulated drugs. Herein, practical recommendations for performing three LAL formats including turbidity, chromogenic and gel-clot assays are discussed. These assays can be used to determine endotoxin contamination in nanotechnology-based drug products, vaccines, and adjuvants.

Detection of Endotoxin in Nano-formulations Using Limulus Amoebocyte Lysate LAL Assays

Detection of endotoxins in engineered nanomaterials represents one of the grand challenges in the field of nanomedicine. Here, we present a case study that describes the framework composed of three different LAL formats to estimate potential endotoxin contamination in nanoparticles.

Nano-formülasyonları endotoksin tespiti Limulus Amoebocyte Lysate (LAL) deneyleri kullanarak

When present in pharmaceutical products, a Gram-negative bacterial cell wall component endotoxin (often also called lipopolysaccharide) can cause ...

Evaluation of the Storage Stability of Extracellular Vesicles

Extracellular vesicles (EVs) are promising targets in current research, to be used as drugs, drug-carriers, and biomarkers. For their clinical development, not only their pharmaceutical activity is important but also their production needs to be evaluated. In this context, research focuses on the isolation of EVs, their characterization, and their storage. The present manuscript aims at providing a facile procedure for the assessment of the effect of different storage conditions on EVs, without genetic manipulation or specific functional assays. This makes it possible to quickly get a first impression of the stability of EVs under a given storage condition, and EVs derived from different cell sources can be compared easily. The stability measurement is based on the physicochemical parameters of the EVs (size, particle concentration, and morphology) and the preservation of the activity of their cargo. The latter is assessed by the saponin-mediated encapsulation of the enzyme beta-glucuronidase into the EVs. Glucuronidase acts as a surrogate and allows for an easy quantification via the cleavage of a fluorescent reporter molecule. The present protocol could be a tool for researchers in the search for storage conditions that optimally retain EV properties to advance EV research toward clinical application.

Here we present a readily applicable protocol to assess the storage stability of extracellular vesicles, a group of naturally occurring nanoparticles produced by cells. The vesicles are loaded with glucuronidase as a model enzyme and stored under different conditions. After storage, their physicochemical parameters and the activity of the encapsulated enzyme are evaluated.

Ekstrasellüler veziküllerin depolama Istikrarı değerlendirilmesi

Extracellular vesicles (EVs) are promising targets in current research, to be used as drugs, drug-carriers, and biomarkers. For their clinical ...

Rapid Fabrication of Custom Microfluidic Devices for Research and Educational Applications

Microfluidic devices allow for the manipulation of fluids, particles, cells, micro-sized organs or organisms in channels ranging from the nano to submillimeter scales. A rapid increase in the use of this technology in the biological sciences has prompted a need for methods that are accessible to a wide range of research groups. Current fabrication standards, such as PDMS bonding, require expensive and time consuming lithographic and bonding techniques. A viable alternative is the use of equipment and materials that are easily affordable, require minimal expertise and allow for the rapid iteration of designs. In this work we describe a protocol for designing and producing PET-laminates (PETLs), microfluidic devices that are inexpensive, easy to fabricate, and consume significantly less time to generate than other approaches to microfluidics technology. They consist of thermally bonded film sheets, in which channels and other features are defined using a craft cutter. PETLs solve field-specific technical challenges while dramatically reducing obstacles to adoption. This approach facilitates the accessibility of microfluidics devices in both research and educational settings, providing a reliable platform for new methods of inquiry.

Here we present a protocol to design and fabricate custom microfluidic devices with minimal financial and time investment. The aim is to facilitate the adoption of microfluidic technologies in biomedical research laboratories and educational settings.

Araştırma ve Eğitim Uygulamaları için Özel Mikroakışkan Cihazların Hızlı İmalatı

Microfluidic devices allow for the manipulation of fluids, particles, cells, micro-sized organs or organisms in channels ranging from the nano to ...

Electric and Magnetic Field Devices for Stimulation of Biological Tissues

Electric fields (EFs) and magnetic fields (MFs) have been widely used by tissue engineering to improve cell dynamics such as proliferation, migration, differentiation, morphology, and molecular synthesis. However, variables such stimuli strength and stimulation times need to be considered when stimulating either cells, tissues or scaffolds. Given that EFs and MFs vary according to cellular response, it remains unclear how to build devices that generate adequate biophysical stimuli to stimulate biological samples. In fact, there is a lack of evidence regarding the calculation and distribution when biophysical stimuli are applied. This protocol is focused on the design and manufacture of devices to generate EFs and MFs and implementation of a computational methodology to predict biophysical stimuli distribution inside and outside of biological samples. The EF device was composed of two parallel stainless-steel electrodes located at the top and bottom of biological cultures. Electrodes were connected to an oscillator to generate voltages (50, 100, 150 and 200 Vp-p) at 60 kHz. The MF device was composed of a coil, which was energized with a transformer to generate a current (1 A) and voltage (6 V) at 60 Hz. A polymethyl methacrylate support was built to locate the biological cultures in the middle of the coil. The computational simulation elucidated the homogeneous distribution of EFs and MFs inside and outside of biological tissues. This computational model is a promising tool that can modify parameters such as voltages, frequencies, tissue morphologies, well plate types, electrodes and coil size to estimate the EFs and MFs to achieve a cellular response.

This protocol describes the step-by-step process to build both electrical and magnetic stimulators used to stimulate biological tissues. The protocol includes a guideline to simulate computationally electric and magnetic fields and manufacture of stimulator devices.

Biyolojik Dokuların Uyarılması için Elektrikli ve Manyetik Alan Cihazları

Electric fields (EFs) and magnetic fields (MFs) have been widely used by tissue engineering to improve cell dynamics such as proliferation, migration, ...

Labeling of Extracellular Vesicles for Monitoring Migration and Uptake in Cartilage Explants

Extracellular vesicles (EVs) are used in different studies to prove their potential as a cell-free treatment due to their cargo derived from their cellular source, such as platelet lysate (PL). When used as treatment, EVs are expected to enter the target cells and effect a response from these. In this research, PL-derived EVs have been studied as a cell-free treatment for osteoarthritis (OA). Thus, a method was set up to label EVs and test their uptake on cartilage explants. PL-derived EVs are labeled with the lipophilic dye PKH26, washed twice through a column, and then tested in an in vitro inflammation-driven&#160;OA model for 5 h after particle quantification by nanoparticle tracking analysis (NTA). Hourly, cartilage explants are fixed, paraffined, cut into 6 &#181;m sections to mount on slides, and observed under a confocal microscope. This allows verification of whether EVs enter the target cells (chondrocytes) during this period and analyze their direct effect.

Here, we present a protocol to label platelet lysate-derived extracellular vesicles to monitor their migration and uptake in cartilage explants used as a model for osteoarthritis.

Kıkırdak Eksplantlarında Göç ve Alımı İzlemek için Hücre Dışı Veziküllerin Etiketlenmesi

Extracellular vesicles (EVs) are used in different studies to prove their potential as a cell-free treatment due to their cargo derived from their ...

Improving Reproducibility to Meet Minimal Information for Studies of Extracellular Vesicles 2018 Guidelines in Nanoparticle Tracking Analysis

Nanoparticle tracking analysis (NTA) has been one of several characterization methods used for extracellular vesicle (EV) research since 2006. Many consider that NTA instruments and their software packages can be easily utilized following minimal training and that size calibration is feasible in-house. As both NTA acquisition and software analysis constitute EV characterization, they are addressed in Minimal Information for Studies of Extracellular Vesicles 2018 (MISEV2018). In addition, they have been monitored by Transparent Reporting and Centralizing Knowledge in Extracellular Vesicle Research (EV-TRACK) to improve the robustness of EV experiments (e.g., minimize experimental variation due to uncontrolled factors).
Despite efforts to encourage the reporting of methods and controls, many published research papers fail to report critical settings needed to reproduce the original NTA observations. Few papers report the NTA characterization of negative controls or diluents, evidently assuming that commercially available products, such as phosphate-buffered saline or ultrapure distilled water, are particulate-free. Similarly, positive controls or size standards are seldom reported by researchers to verify particle sizing. The Stokes-Einstein equation incorporates sample viscosity and temperature variables to determine particle displacement. Reporting the stable laser chamber temperature during the entire sample video collection is, therefore, an essential control measure for accurate replication. The filtration of samples or diluents is also not routinely reported, and if so, the specifics of the filter (manufacturer, membrane material, pore size) and storage conditions are seldom included. The International Society for Extracellular Vesicle (ISEV)&#39;s minimal standards of acceptable experimental detail should include a well-documented NTA protocol for the characterization of EVs. The following experiment provides evidence that an NTA analysis protocol needs to be established by the individual researcher and included in the methods of publications that use NTA characterization as one of the options to fulfill MISEV2018 requirements for single vesicle characterization.

Nanoparticle tracking analysis (NTA) is a widely used method to characterize extracellular vesicles. This paper highlights NTA experimental parameters and controls plus a uniform method of analysis and characterization of samples and diluents necessary to supplement the guidelines proposed by MISEV2018 and EV-TRACK for reproducibility between laboratories.

Hücre Dışı Vezikül Çalışmaları için Minimum Bilgiyi Karşılamak için Yeniden Üretilebilirliğin Geliştirilmesi 2018 Nanopartikül İzleme Analizinde Kılavuzlar

Nanoparticle tracking analysis (NTA) has been one of several characterization methods used for extracellular vesicle (EV) research since 2006. Many ...

Design to Implementation Study for Development and Patient Validation of Paper-Based Toehold Switch Diagnostics

Access to low-burden molecular diagnostics that can be deployed into the community for testing is increasingly important and has meaningful wider implications for the well-being of societies and economic stability. Recent years have seen several new isothermal diagnostic modalities emerge to meet the need for rapid, low-cost molecular diagnostics. We have contributed to this effort through the development and patient validation of toehold switch-based diagnostics, including diagnostics for the mosquito-borne Zika and chikungunya viruses, which provided performance comparable to gold-standard reverse transcription-quantitative polymerase chain reaction (RT-qPCR) based assays. These diagnostics are inexpensive to develop and manufacture, and they have the potential to provide diagnostic capacity to low-resource environments. Here the protocol provides all the steps necessary for the development of a switch-based assay for Zika virus detection. The article takes readers through the stepwise diagnostic development process. First, genomic sequences of Zika virus serve as inputs for the computational design of candidate switches using open-source software. Next, the assembly of the sensors for empirical screening with synthetic RNA sequences and optimization of diagnostic sensitivity is shown. Once complete, validation is performed with patient samples in parallel with RT-qPCR, and a purpose-built optical reader, PLUM. This work provides a technical roadmap to researchers for the development of low-cost toehold switch-based sensors for applications in human health, agriculture, and environmental monitoring.

Access to decentralized, low-cost, and high-capacity diagnostics that can be deployed into the community for decentralized testing is critical for combating global health crises. This manuscript describes how to build paper-based diagnostics for viral RNA sequences that can be detected with a portable optical reader.

Kağıt Tabanlı Toehold Anahtarı Tanılamanın Geliştirilmesi ve Hasta Doğrulaması için Tasarımdan Uygulamaya Çalışma

Access to low-burden molecular diagnostics that can be deployed into the community for testing is increasingly important and has meaningful wider ...

Evaluation of Cardiac Contractility Modulation Therapy in 2D Human Stem Cell-Derived Cardiomyocytes

Human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) are currently being explored for multiple in vitro applications and have been used in regulatory submissions. Here, we extend their use to cardiac medical device safety or performance assessments. We developed a novel method to evaluate cardiac medical device contractile properties in robustly contracting 2D hiPSC-CMs monolayers plated on a flexible extracellular matrix (ECM)-based hydrogel substrate. This tool enables the quantification of the effects of cardiac electrophysiology device signals on human cardiac function (e.g., contractile properties) with standard laboratory equipment. The 2D hiPSC-CM monolayers were cultured for 2-4 days on a flexible hydrogel substrate in a 48-well format.
The hiPSC-CMs were exposed to standard cardiac contractility modulation (CCM) medical device electrical signals and compared to control (i.e., pacing only) hiPSC-CMs. The baseline contractile properties of the 2D hiPSC-CMs were quantified by video-based detection analysis based on pixel displacement. The CCM-stimulated 2D hiPSC-CMs plated on the flexible hydrogel substrate displayed significantly enhanced contractile properties relative to baseline (i.e., before CCM stimulation), including an increased peak contraction amplitude and accelerated contraction and relaxation kinetics. Furthermore, the utilization of the flexible hydrogel substrate enables the multiplexing of the video-based cardiac-excitation contraction coupling readouts (i.e., electrophysiology, calcium handling, and contraction) in healthy and diseased hiPSC-CMs. The accurate detection and quantification of the effects of cardiac electrophysiological signals on human cardiac contraction is vital for cardiac medical device development, optimization, and de-risking. This method enables the robust visualization and quantification of the contractile properties of the cardiac syncytium, which should be valuable for nonclinical cardiac medical device safety or effectiveness testing. This paper describes, in detail, the methodology to generate 2D hiPSC-CM hydrogel substrate monolayers.

Here, we demonstrate a non-invasive cardiac medical device contractility evaluation method using 2D human induced pluripotent stem cell-derived cardiomyocyte (hiPSC-CM) monolayers, plated on a flexible substrate, coupled with video-based microscopy. This tool will be useful for the in vitro evaluation of the contractile properties of cardiac electrophysiology devices.

2D İnsan Kök Hücre Kaynaklı Kardiyomiyositlerde Kardiyak Kontraktilite Modülasyon Tedavisinin Değerlendirilmesi

Human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) are currently being explored for multiple in vitro applications and have been used ...