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Divergence of Root Microbiota in Different Habitats based on Weighted Correlation Networks

DOI :

10.3791/62205-v

September 25th, 2021

September 25th, 2021

3,989 Views

1Key Laboratory of State Forestry Administration on Biodiversity Conservation in Karst Mountainous Areas of Southwestern China, School of Life Sciences, Guizhou Normal University, 2State Key Laboratory of Plant Physiology and Development in Guizhou Province, Guizhou Normal University

Network analysis was applied to evaluate the association of various ecological microbial communities, such as soil, water and rhizosphere. Presented here is a protocol on how to use the WGCNA algorithm to analyze different co-occurrence networks that may occur in the microbial communities due to different ecological environments.

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