Nediljko Budisa

Institute of Chemistry, Technische Universität Berlin

Affiliated withTechnische Universität Berlin Technical University of Berlin University of Manitoba

Research Area

BiologyBioengineering

Biography

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JoVE Journal Publications

Article Total : 4	Year
Publication title	2016
Publication title	2018
Publication title	2018
Publication title	2022

Other Publications

Article	Year
Congeneric lantibiotics from ribosomal in vivo peptide synthesis with noncanonical amino acids. Angewandte Chemie (International ed. in English)\| PubMed ID: 22128014	2012
Recent advances in genetic code engineering in Escherichia coli. Current opinion in biotechnology\| PubMed ID: 22237016	2012
Performance analysis of orthogonal pairs designed for an expanded eukaryotic genetic code. PloS one\| PubMed ID: 22493661	2012
Conjugation of proteins by installing BIO-orthogonally reactive groups at their N-termini. PloS one\| PubMed ID: 23056430	2012
Expanded genetic code for the engineering of ribosomally synthetized and post-translationally modified peptide natural products (RiPPs). Current opinion in biotechnology\| PubMed ID: 23537814	2013
Coupling bioorthogonal chemistries with artificial metabolism: intracellular biosynthesis of azidohomoalanine and its incorporation into recombinant proteins. Molecules (Basel, Switzerland)\| PubMed ID: 24434673	2014
Fluorine-rich planetary environments as possible habitats for life. Life (Basel, Switzerland)\| PubMed ID: 25370378	2014
Site-directed and global incorporation of orthogonal and isostructural noncanonical amino acids into the ribosomal lasso peptide capistruin. Chembiochem : a European journal of chemical biology\| PubMed ID: 25504932	2015
Applying γ-substituted prolines in the foldon peptide: polarity contradicts preorganization. Chembiochem : a European journal of chemical biology\| PubMed ID: 25515969	2015
γ-(S)-Trifluoromethyl proline: evaluation as a structural substitute of proline for solid state (19)F-NMR peptide studies. Organic & biomolecular chemistry\| PubMed ID: 25703116	2015
Orthogonal translation meets electron transfer: in vivo labeling of cytochrome c for probing local electric fields. Chembiochem : a European journal of chemical biology\| PubMed ID: 25706908	2015
Orthogonal dual-modification of proteins for the engineering of multivalent protein scaffolds. Beilstein journal of organic chemistry\| PubMed ID: 26124880	2015
Cell-free expression with the toxic amino acid canavanine. Bioorganic & medicinal chemistry letters\| PubMed ID: 26130409	2015
Chemical Evolution of a Bacterial Proteome. Angewandte Chemie (International ed. in English)\| PubMed ID: 26136259	2015
Strategy for Enhancement of (13)C-Photo-CIDNP NMR Spectra by Exploiting Fractional (13)C-Labeling of Tryptophan. The journal of physical chemistry. B\| PubMed ID: 26244593	2015
Entropic Contribution of Elongation Factor P to Proline Positioning at the Catalytic Center of the Ribosome. Journal of the American Chemical Society\| PubMed ID: 26384033	2015
Dendronylation: Residue-specific chemoselective attachment of oligoglycerol dendrimers on proteins with noncanonical amino acids. Bioorganic & medicinal chemistry letters\| PubMed ID: 26483199	2015
Incorporation of Amino Acids with Long-Chain Terminal Olefins into Proteins. Molecules (Basel, Switzerland)\| PubMed ID: 26938510	2016
cis-trans-Amide isomerism of the 3,4-dehydroproline residue, the 'unpuckered' proline. Beilstein journal of organic chemistry\| PubMed ID: 27340450	2016
Towards Biocontained Cell Factories: An Evolutionarily Adapted Escherichia coli Strain Produces a New-to-nature Bioactive Lantibiotic Containing Thienopyrrole-Alanine. Scientific reports\| PubMed ID: 27634138	2016
One-Pot Synthesis of Unprotected Anomeric Glycosyl Thiols in Water for Glycan Ligation Reactions with Highly Functionalized Sugars. Angewandte Chemie (International ed. in English)\| PubMed ID: 27860027	2016
Design of S-Allylcysteine in Situ Production and Incorporation Based on a Novel Pyrrolysyl-tRNA Synthetase Variant. Chembiochem : a European journal of chemical biology\| PubMed ID: 27862817	2017
Construction of a polyproline structure with hydrophobic exterior using octahydroindole-2-carboxylic acid. Organic & biomolecular chemistry\| PubMed ID: 27959372	2017
Biocatalysis with Unnatural Amino Acids: Enzymology Meets Xenobiology. Angewandte Chemie (International ed. in English)\| PubMed ID: 28085996	2017
Discovery and Investigation of Natural Editing Function against Artificial Amino Acids in Protein Translation. ACS central science\| PubMed ID: 28149956	2017
Prospects of Incorporation of Non-canonical Amino Acids for the Chemical Diversification of Antimicrobial Peptides. Frontiers in microbiology\| PubMed ID: 28210246	2017
An expanded genetic code for probing the role of electrostatics in enzyme catalysis by vibrational Stark spectroscopy. Biochimica et biophysica acta\| PubMed ID: 28229928	2017
Coupling genetic code expansion and metabolic engineering for synthetic cells. Current opinion in biotechnology\| PubMed ID: 28237511	2017
Xenobiology: State-of-the-Art, Ethics, and Philosophy of New-to-Nature Organisms. Advances in biochemical engineering/biotechnology\| PubMed ID: 28567486	2018
Peptidyl-Prolyl Model Study: How Does the Electronic Effect Influence the Amide Bond Conformation? The Journal of organic chemistry\| PubMed ID: 28590735	2017
Photoactivatable Mussel-Based Underwater Adhesive Proteins by an Expanded Genetic Code. Chembiochem : a European journal of chemical biology\| PubMed ID: 28650092	2017
Synthetic alienation of microbial organisms by using genetic code engineering: Why and how? Biotechnology journal\| PubMed ID: 28671771	2017
Selective F-Labeling of Functionalized Carboxylic Acids with Difluoromethyl Diazomethane (CF HCHN ). Chemistry (Weinheim an der Bergstrasse, Germany)\| PubMed ID: 28753245	2017
Amide rotation trajectories probed by symmetry. Organic & biomolecular chemistry\| PubMed ID: 28766656	2017
Deciphering the Fluorine Code-The Many Hats Fluorine Wears in a Protein Environment. Accounts of chemical research\| PubMed ID: 28803466	2017
Global substitution of hemeproteins with noncanonical amino acids in Escherichia coli with intact cofactor maturation machinery. Enzyme and microbial technology\| PubMed ID: 28859810	2017
On universal coding events in protein biogenesis. Bio Systems\| PubMed ID: 29030023	2018
Comprehensive identification of proteins binding to RNA G-quadruplex motifs in the 5' UTR of tumor-associated mRNAs. Biochimie\| PubMed ID: 29129743	2018
Hydrolysis, polarity, and conformational impact of C-terminal partially fluorinated ethyl esters in peptide models. Beilstein journal of organic chemistry\| PubMed ID: 29234471	2017
Self-Directed in Cell Production of Methionine Analogue Azidohomoalanine by Synthetic Metabolism and Its Incorporation into Model Proteins. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 29404994	2018
Exploring hydrophobicity limits of polyproline helix with oligomeric octahydroindole-2-carboxylic acid. Journal of peptide science : an official publication of the European Peptide Society\| PubMed ID: 29582506	2018
Transmembrane Polyproline Helix. The journal of physical chemistry letters\| PubMed ID: 29638132	2018
Expanding the Genetic Code of and to Incorporate Non-canonical Amino Acids for Production of Modified Lantibiotics. Frontiers in microbiology\| PubMed ID: 29681891	2018
Painting argyrins blue: Negishi cross-coupling for synthesis of deep-blue tryptophan analogue β-(1-azulenyl)-l alanine and its incorporation into argyrin C. Bioorganic & medicinal chemistry\| PubMed ID: 29729984	2018
Long-Range Modulations of Electric Fields in Proteins. The journal of physical chemistry. B\| PubMed ID: 30109934	2018
Site-Resolved Observation of Vibrational Energy Transfer Using a Genetically Encoded Ultrafast Heater. Angewandte Chemie (International ed. in English)\| PubMed ID: 30589180	2019
Site-Specific Chemoselective Pyrrolysine Analogues Incorporation Using the Cell-Free Protein Synthesis System. ACS synthetic biology\| PubMed ID: 30589532	2019
Alternative Biochemistries for Alien Life: Basic Concepts and Requirements for the Design of a Robust Biocontainment System in Genetic Isolation. Genes\| PubMed ID: 30597824	2018
Promotion of the collagen triple helix in a hydrophobic environment. Organic & biomolecular chemistry\| PubMed ID: 30758035	2019
In-Cell Synthesis of Bioorthogonal Alkene Tag S-Allyl-Homocysteine and Its Coupling with Reprogrammed Translation. International journal of molecular sciences\| PubMed ID: 31075919	2019
Computational Aminoacyl-tRNA Synthetase Library Design for Photocaged Tyrosine. International journal of molecular sciences\| PubMed ID: 31083552	2019
Phage capsid nanoparticles with defined ligand arrangement block influenza virus entry. Nature nanotechnology\| PubMed ID: 32231271	2020
Discovery and Characterization of a New Cold-Active Protease From an Extremophilic Bacterium via Comparative Genome Analysis and Expression. Frontiers in microbiology\| PubMed ID: 32528424	2020
An Engineered Escherichia coli Strain with Synthetic Metabolism for in-Cell Production of Translationally Active Methionine Derivatives. Chembiochem : a European journal of chemical biology\| PubMed ID: 32734669	2020
Expanding the Scope of Orthogonal Translation with Pyrrolysyl-tRNA Synthetases Dedicated to Aromatic Amino Acids. Molecules (Basel, Switzerland)\| PubMed ID: 32992991	2020
Courses Based on iGEM/BIOMOD Competitions Are the Ideal Format for Research-Based Learning of Xenobiology. Chembiochem : a European journal of chemical biology\| PubMed ID: 33191631	2021
Multiomics Analysis Provides Insight into the Laboratory Evolution of toward the Metabolic Usage of Fluorinated Indoles. ACS central science\| PubMed ID: 33532571	2021
Local Electric Field Changes during the Photoconversion of the Bathy Phytochrome Agp2. Biochemistry\| PubMed ID: 34570488	2021
Engineering Pyrrolysyl-tRNA Synthetase for the Incorporation of Non-Canonical Amino Acids with Smaller Side Chains. International journal of molecular sciences\| PubMed ID: 34681855	2021