Indiana Center for Biological Microscopy,
Department of Medicine
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Three-dimensional imaging of embryonic mouse kidney by two-photon microscopy.
The American journal of pathology Jan, 2001 | Pubmed ID: 11141478
Voxx: a PC-based, near real-time volume rendering system for biological microscopy.
American journal of physiology. Cell physiology Jan, 2002 | Pubmed ID: 11742814
Rac1, but not RhoA, signaling protects epithelial adherens junction assembly during ATP depletion.
American journal of physiology. Cell physiology Jul, 2002 | Pubmed ID: 12055095
Functional studies of the kidney of living animals using multicolor two-photon microscopy.
American journal of physiology. Cell physiology Sep, 2002 | Pubmed ID: 12176747
Nucleotide depletion increases trafficking of gentamicin to the Golgi complex in LLC-PK1 cells.
American journal of physiology. Renal physiology Dec, 2002 | Pubmed ID: 12388419
A novel method to determine specificity and sensitivity of the TUNEL reaction in the quantitation of apoptosis.
American journal of physiology. Cell physiology May, 2003 | Pubmed ID: 12676658
The E5 protein of human papillomavirus type 16 perturbs MHC class II antigen maturation in human foreskin keratinocytes treated with interferon-gamma.
Virology May, 2003 | Pubmed ID: 12788634
Testing effects of signal transduction pathways on cadherin junctional complex assembly using quantitative image analysis.
Methods (San Diego, Calif.) Jul, 2003 | Pubmed ID: 12798136
Novel light microscopy imaging techniques in nephrology.
Current opinion in nephrology and hypertension Jul, 2003 | Pubmed ID: 12815343
Two-photon in vivo microscopy of sulfonefluorescein secretion in normal and cystic rat kidneys.
American journal of physiology. Renal physiology Jan, 2004 | Pubmed ID: 12965895
Renal cysts of inv/inv mice resemble early infantile nephronophthisis.
Journal of the American Society of Nephrology : JASN Jul, 2004 | Pubmed ID: 15213262
Principles of multiphoton microscopy.
Nephron. Experimental nephrology , 2006 | Pubmed ID: 16543762
Rab10 regulates membrane transport through early endosomes of polarized Madin-Darby canine kidney cells.
Molecular biology of the cell Jul, 2006 | Pubmed ID: 16641372
Chronic alcohol drinking alters neuronal dendritic spines in the brain reward center nucleus accumbens.
Brain research Feb, 2007 | Pubmed ID: 17198693
Functional studies in living animals using multiphoton microscopy.
ILAR journal , 2008 | Pubmed ID: 18172334
Live-animal imaging of renal function by multiphoton microscopy.
Current protocols in cytometry / editorial board, J. Paul Robinson, managing editor ... [et al.] Jul, 2007 | Pubmed ID: 18770850
Neonatal Fc receptor mediates internalization of Fc in transfected human endothelial cells.
Molecular biology of the cell Dec, 2008 | Pubmed ID: 18843053
Macrophage NADPH oxidase flavocytochrome B localizes to the plasma membrane and Rab11-positive recycling endosomes.
Journal of immunology (Baltimore, Md. : 1950) Feb, 2009 | Pubmed ID: 19201887
Improving Signal Levels in Intravital Multiphoton Microscopy using an Objective Correction Collar.
Optics communications Apr, 2008 | Pubmed ID: 19343075
Rab10 associates with primary cilia and the exocyst complex in renal epithelial cells.
American journal of physiology. Renal physiology Sep, 2010 | Pubmed ID: 20576682
A practical guide to evaluating colocalization in biological microscopy.
American journal of physiology. Cell physiology Apr, 2011 | Pubmed ID: 21209361
Two-photon imaging within the murine thorax without respiratory and cardiac motion artifact.
The American journal of pathology Jul, 2011 | Pubmed ID: 21703395
Deep tissue fluorescent imaging in scattering specimens using confocal microscopy.
Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada Aug, 2011 | Pubmed ID: 21729357
Endotoxin uptake by S1 proximal tubular segment causes oxidative stress in the downstream S2 segment.
Journal of the American Society of Nephrology : JASN Aug, 2011 | Pubmed ID: 21784899
Digital correction of motion artefacts in microscopy image sequences collected from living animals using rigid and nonrigid registration.
Journal of microscopy Feb, 2012 | Pubmed ID: 22092443
Effects of IFN-γ on intracellular trafficking and activity of macrophage NADPH oxidase flavocytochrome b558.
Journal of leukocyte biology Oct, 2012 | Pubmed ID: 22822009
Live-animal imaging of renal function by multiphoton microscopy.
Current protocols in cytometry / editorial board, J. Paul Robinson, managing editor ... [et al.] Oct, 2012 | Pubmed ID: 23042524
High resolution 4-dimension imaging of metanephric embryonic kidney morphogenesis.
Kidney international Apr, 2013 | Pubmed ID: 23325081
Statistical tests for measures of colocalization in biological microscopy.
Journal of microscopy Dec, 2013 | Pubmed ID: 24117417
Effects of chronic kidney disease on liver transport: quantitative intravital microscopy of fluorescein transport in the rat liver.
American journal of physiology. Regulatory, integrative and comparative physiology Dec, 2014 | Pubmed ID: 25339682
IMART software for correction of motion artifacts in images collected in intravital microscopy.
Intravital , 2014 | Pubmed ID: 26090271
A practical method for monitoring FRET-based biosensors in living animals using two-photon microscopy.
American journal of physiology. Cell physiology Dec, 2015 | Pubmed ID: 26333599
Gene targets of mouse miR-709: regulation of distinct pools.
Scientific reports Jan, 2016 | Pubmed ID: 26743462
A simple approach for measuring FRET in fluorescent biosensors using two-photon microscopy.
Nature protocols Nov, 2016 | Pubmed ID: 27685098
Kinetic analyses of vasculogenesis inform mechanistic studies.
American journal of physiology. Cell physiology Apr, 2017 | Pubmed ID: 28100488
Quantitative Three-Dimensional Tissue Cytometry to Study Kidney Tissue and Resident Immune Cells.
Journal of the American Society of Nephrology : JASN Jul, 2017 | Pubmed ID: 28154201
Two-Photon Intravital Fluorescence Lifetime Imaging of the Kidney Reveals Cell-Type Specific Metabolic Signatures.
Journal of the American Society of Nephrology : JASN Aug, 2017 | Pubmed ID: 28250053
Using quantitative intravital multiphoton microscopy to dissect hepatic transport in rats.
Methods (San Diego, Calif.) Sep, 2017 | Pubmed ID: 28434905
Large-scale 3-dimensional quantitative imaging of tissues: state-of-the-art and translational implications.
Translational research : the journal of laboratory and clinical medicine Nov, 2017 | Pubmed ID: 28784428
Imaging cell biology and physiology in vivo using intravital microscopy.
Methods (San Diego, Calif.) Sep, 2017 | Pubmed ID: 28911732
Live-Animal Imaging of Renal Function by Multiphoton Microscopy.
Current protocols in cytometry Jan, 2018 | Pubmed ID: 29345326
Intravital Multiphoton Microscopy with Fluorescent Bile Salts in Rats as an In Vivo Biomarker for Hepatobiliary Transport Inhibition.
Drug metabolism and disposition: the biological fate of chemicals 05, 2018 | Pubmed ID: 29467212
Quantitative Large-Scale Three-Dimensional Imaging of Human Kidney Biopsies: A Bridge to Precision Medicine in Kidney Disease.
Nephron , 2018 | Pubmed ID: 29870980
Skeletal accumulation of fluorescently tagged zoledronate is higher in animals with early stage chronic kidney disease.
Osteoporosis international : a journal established as result of cooperation between the European Foundation for Osteoporosis and the National Osteoporosis Foundation of the USA Sep, 2018 | Pubmed ID: 29947866
Modeling of xenobiotic transport and metabolism in virtual hepatic lobule models.
PloS one , 2018 | Pubmed ID: 30212461
A simple automated method for continuous fieldwise measurement of microvascular hemodynamics.
Microvascular research 05, 2019 | Pubmed ID: 30502365
Segmentation of biological images containing multitarget labeling using the jelly filling framework.
Journal of medical imaging (Bellingham, Wash.) Oct, 2018 | Pubmed ID: 30840740
A Versatile, Portable Intravital Microscopy Platform for Studying Beta-cell Biology In Vivo.
Scientific reports Jun, 2019 | Pubmed ID: 31186447
Quantitative Kinetic Models from Intravital Microscopy: A Case Study Using Hepatic Transport.
The journal of physical chemistry. B Aug, 2019 | Pubmed ID: 31298856
DeepSynth: Three-dimensional nuclear segmentation of biological images using neural networks trained with synthetic data.
Scientific reports 12, 2019 | Pubmed ID: 31797882
PIE-FLIM Measurements of Two Different FRET-Based Biosensor Activities in the Same Living Cells.
Biophysical journal Apr, 2020 | Pubmed ID: 32191861
Mitochondrial depolarization and repolarization in the early stages of acetaminophen hepatotoxicity in mice.
Toxicology Jun, 2020 | Pubmed ID: 32315716
1Department of Cellular and Integrative Physiology, Indiana University School of Medicine,
2Herman B Wells Center for Pediatric Research, Indiana University School of Medicine,
3Indiana Center for Biological Microscopy, Indiana University School of Medicine,
4Department of Medicine, Indiana University School of Medicine,
5Department of Pediatrics, Indiana University School of Medicine,
6Department of Microbiology and Immunology, Indiana University School of Medicine,
7Indiana University Simon Cancer Center, Indiana University School of Medicine
Daria Barwinska1,
Michael J. Ferkowicz1,
Ying-Hua Cheng1,
Seth Winfree1,2,
Kenneth W. Dunn1,
Katherine J. Kelly1,
Timothy A. Sutton1,
Brad H. Rovin3,
Samir V. Parikh3,
Carrie L. Phillips4,
Pierre C. Dagher1,
Tarek M. El-Achkar1,
Michael T. Eadon1,
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1Department of Medicine, Indiana University School of Medicine,
2Department of Cellular & Integrative Physiology, Indiana University School of Medicine,
3Division of Nephrology, Department of Medicine, Ohio State University Wexner Medical Center,
4Division of Pathology, Indiana University School of Medicine
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