Bu eser (PO 1440 / 1-1) LP PRJ bir ARC Decra (DE120101311) tarafından ve bir Deutsche Forschungsgemeinschaft (DFG) araştırma bursu ile desteklenmiştir. Avustralya Rejeneratif Tıp Enstitüsü Victoria Eyalet Hükümeti ve Avustralya Federal Hükümeti fonları tarafından desteklenmektedir. Biz Kei ve ark yayınlanan Burada anlatılan deneyler yaptılar Dr. Jeremy Ng Chi Kei, kabul. 2016 Prof. Higashijima gelen transgenik balık hükümleri için minnettarız ve Profs teşekkür ederiz. H2B-RFP ve H2A-GFP yapıları oluşturmak için pCS2 plazmid Dr. Wilkinson sağlanması için Turner ve Rupp. Biz hayvanların bakımı için FishCore tesis personeli (Monash Üniversitesi) teşekkür ederim.

<ol>
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A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Lineage+in+the+vertebrate+retina.">Lineage in the vertebrate retina.</a> Trends Neurosci. 29, 563-570 (2006).</li><li>Poggi, L., Vitorino, M., Masai, I., Harris, W. A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Influences+on+neural+lineage+and+mode+of+division+in+the+zebrafish+retina+in+vivo.">Influences on neural lineage and mode of division in the zebrafish retina in vivo.</a> J Cell Biol. 171, 991-999 (2005).</li><li>Poggi, L., Zolessi, F. R., Harris, W. A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Time-lapse+analysis+of+retinal+differentiation.">Time-lapse analysis of retinal differentiation.</a> Curr Opin Cell Biol. 17, 676-681 (2005).</li><li>Jusuf, P. R., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Biasing+amacrine+subtypes+in+the+Atoh7+lineage+through+expression+of+Barhl2.">Biasing amacrine subtypes in the Atoh7 lineage through expression of Barhl2.</a> J Neurosci. 32, 13929-13944 (2012).</li><li>Jusuf, P. R., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Origin+and+determination+of+inhibitory+cell+lineages+in+the+vertebrate+retina.">Origin and determination of inhibitory cell lineages in the vertebrate retina.</a> J Neurosci. 31, 2549-2562 (2011).</li><li>Jusuf, P., Harris, W. A., Poggi, L. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Imaging+retinal+progenitor+lineages+in+developing+zebrafish+embryos.">Imaging retinal progenitor lineages in developing zebrafish embryos.</a> Cold Spring Harb Protoc. 2013, (2013).</li><li>Jusuf, P., Harris, W. 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A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Cell-specific+regulation+of+neuronal+production+in+the+larval+frog+retina.">Cell-specific regulation of neuronal production in the larval frog retina.</a> J Neurosci. 7, 3317-3324 (1987).</li><li>Reh, T. A., Tully, T. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Regulation+of+tyrosine+hydroxylase-containing+amacrine+cell+number+in+larval+frog+retina.">Regulation of tyrosine hydroxylase-containing amacrine cell number in larval frog retina.</a> Dev Biol. 114, 463-469 (1986).</li><li>Livesey, F. J., Cepko, C. L. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Vertebrate+neural+cell-fate+determination:+lessons+from+the+retina.">Vertebrate neural cell-fate determination: lessons from the retina.</a> Nature reviews. Neuroscience. 2, 109-118 (2001).</li><li>Zolessi, F. R., Poggi, L., Wilkinson, C. J., Chien, C. B., Harris, W. A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Polarization+and+orientation+of+retinal+ganglion+cells+in+vivo.">Polarization and orientation of retinal ganglion cells in vivo.</a> Neural Dev. 1, 2 (2006).</li><li>Kimura, Y., Okamura, Y., Higashijima, S. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=alx,+a+zebrafish+homolog+of+Chx10,+marks+ipsilateral+descending+excitatory+interneurons+that+participate+in+the+regulation+of+spinal+locomotor+circuits.">alx, a zebrafish homolog of Chx10, marks ipsilateral descending excitatory interneurons that participate in the regulation of spinal locomotor circuits.</a> J Neurosci. 26, 5684-5697 (2006).</li><li>Kimura, Y., Satou, C., Higashijima, S. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=V2a+and+V2b+neurons+are+generated+by+the+final+divisions+of+pair-producing+progenitors+in+the+zebrafish+spinal+cord.">V2a and V2b neurons are generated by the final divisions of pair-producing progenitors in the zebrafish spinal cord.</a> Development. 135, 3001-3005 (2008).</li><li>Westerfield, M. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=.">.</a> The Zebrafish Book: A Guide for the Laboratory Use of Zebrafish (Danio Rerio). , (2007).</li><li>Kimmel, C. B., Ballard, W. W., Kimmel, S. R., Ullmann, B., Schilling, T. F. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Stages+of+embryonic+development+of+the+zebrafish.">Stages of embryonic development of the zebrafish.</a> Dev Dyn. 203 (3), 253-310 (1995).</li><li>Kei, J. N., Dudczig, S., Currie, P. D., Jusuf, P. R. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Feedback+from+each+retinal+neuron+population+drives+expression+of+subsequent+fate+determinant+genes+without+influencing+the+cell+cycle+exit+timing.">Feedback from each retinal neuron population drives expression of subsequent fate determinant genes without influencing the cell cycle exit timing.</a> J Comp Neurol. 524, 2553-2566 (2016).</li><li>Yuan, S., Sun, Z. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Microinjection+of+mRNA+and+morpholino+antisense+oligonucleotides+in+zebrafish+embryos.">Microinjection of mRNA and morpholino antisense oligonucleotides in zebrafish embryos.</a> J Vis Exp. , (2009).</li><li>Rosen, J. N., Sweeney, M. F., Mably, J. D. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Microinjection+of+zebrafish+embryos+to+analyze+gene+function.">Microinjection of zebrafish embryos to analyze gene function.</a> J Vis Exp. , (2009).</li><li>Zou, J., Wei, X. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Transplantation+of+GFP-expressing+blastomeres+for+live+imaging+of+retinal+and+brain+development+in+chimeric+zebrafish+embryos.">Transplantation of GFP-expressing blastomeres for live imaging of retinal and brain development in chimeric zebrafish embryos.</a> J Vis Exp. , (2010).</li><li>Kemp, H. A., Carmany-Rampey, A., Moens, C. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Generating+chimeric+zebrafish+embryos+by+transplantation.">Generating chimeric zebrafish embryos by transplantation.</a> J Vis Exp. , (2009).</li><li>Schier, A. F., Talbot, W. S. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Molecular+genetics+of+axis+formation+in+zebrafish.">Molecular genetics of axis formation in zebrafish.</a> Annu Rev Genet. 39, 561-613 (2005).</li><li>De Luca, E., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=ZebraBeat:+a+flexible+platform+for+the+analysis+of+the+cardiac+rate+in+zebrafish+embryos.">ZebraBeat: a flexible platform for the analysis of the cardiac rate in zebrafish embryos.</a> Sci Rep. 4, 4898 (2014).</li><li>Lin, J. W., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Differential+requirement+for+ptf1a+in+endocrine+and+exocrine+lineages+of+developing+zebrafish+pancreas.">Differential requirement for ptf1a in endocrine and exocrine lineages of developing zebrafish pancreas.</a> Dev Biol. 274, 491-503 (2004).</li><li>Hollyfield, J. G. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Histogenesis+of+the+retina+in+the+killifish,+Fundulus+heteroclitus.">Histogenesis of the retina in the killifish, Fundulus heteroclitus.</a> J Comp Neurol. 144 (3), 373-380 (1972).</li><li>La Vail, M. M., Rapaport, D. H., Rakic, P. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Cytogenesis+in+the+monkey+retina.">Cytogenesis in the monkey retina.</a> J Comp Neurol. 309 (1), 86-114 (1991).</li><li>Rapaport, D. H., Wong, L. L., Wood, E. D., Yasumura, D., LaVail, M. M. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Timing+and+topography+of+cell+genesis+in+the+rat+retina.">Timing and topography of cell genesis in the rat retina.</a> J Comp Neurol. 474 (2), 304-324 (2004).</li><li>Sharma, S. C., Ungar, F. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Histogenesis+of+the+goldfish+retina.">Histogenesis of the goldfish retina.</a> J Comp Neurol. 191 (3), 373-382 (1980).</li><li>Stiemke, M. M., Hollyfield, J. G. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Cell+birthdays+in+Xenopus+laevis+retina.">Cell birthdays in Xenopus laevis retina.</a> Differentiation. 58 (3), 189-193 (1995).</li></ol>

The authors have nothing to disclose.

verimli, belirli bir post-mitotik hücre tipinde, hatta desenli doku içine ayırt etmek için embriyonik veya uyarılmış multipotent kök hücreleri talimat amaçlayan zaman hangi ölçüde komşu hücrelerin hücre zarı kaderi belirleyen faktörlerin ifade zamanlamasını etkilemesi anlamak esastır. Ayrıca, canlı hayvanın gelişmekte olan hücrelerde bu moleküler olayları inceleyen ayrıca ilgili dinamiği in vivo bu olaylar ile ilgili özel hücresel bağlamlarda (zamansal ve mekansal) bilgi sağlar...

<html> In vivo omurgalı önemli gelişim süreçleri görselleştirmek için yeteneği normal ve hastalık koşullarını incelemek için Zebra balığı bir anahtar modeli yapma katkıda bulunmuştur (1 gözden, 2). Özellikle nöral retinanın merkezi sinir sistemi erişilebilir bir parçasıdır. Retina nedeniyle son derece organize, henüz nispeten basit yapısı ve omurgalı türlerin 3 genelindeki yüksek oranda korunmuş nöron tiplerine kolayca nöron çalışmalar yapmak için oldukça rahat. Böyle çoğalması, hücre döngüsü çıkış, asimetrik hücre bölünmesi, kader özellikleri, farklılaşma ve nöral devreler oluşumu gibi hücresel davranışları dinamikleri 3 gün postfertilization tarafından zebrabalıkları merkezi retinada tamamlanır retinogenesis tüm süreç boyunca takip edilebilir ( dpf) 4, 5,ref &quot;&gt; 6, 7. Bundan başka, yukarıda bahsedilen aşamaların her biri farklı genlerin fonksiyonel gereksinimler eş zamanlı olarak, sadece ölüm sonrası inceleme sonucunda tespit edilebilir olup, burada gen knockout tekniklerinin uygulanması sonucu ortaya çıkan fenotipler diğer omurgalı modeller üzerinde bir avantaj sağlayarak, zebra balığı retinada değerlendirilebilir dokularını düzeltildi. Özellikle, görselleştirmek ve retina raportör transgenler olarak floresan proteinleri ifade izleyebilen transgenik hatların kullanımı, ABD, belirli bir nöronal hücre tipinin oluşumunu altında yatan, gen sentezlenmesinin zamansal çözünürlüğü elde edilmesine olanak sağlamaktadır. Nedeniyle zebrabalıkları hızlı gelişimine, bu olaylar dolayısıyla nöronal hücre kimlik edinme ve hücre davranışı ile ilgili olarak gen ifadesinin zamansal önemi hakkında daha ayrıntılı bilgiler sağlayarak, tüm gelişim döneminde görülebilir. Son olarak, bu yaklaşımlar, gen fonksiyonu iki temel yönlerine ilişkin olarak elde edilen, transplantasyon ile kimera üretimi ile zebrabalıkları etkin birleştirilebilir. Birincisi, onlar bir etiketsiz vahşi tip ortamında geliştirmek iken belirli bir genin nakavt edildiği bir donör embriyo, nakledilen hücrelerin incelenmesi, hücre-otonom bir şekilde gen fonksiyonu hakkında ilgili bilgi almak için bize izin verir. Bu, normal olarak, artık, bu genler, 4, 6, fonksiyonel proteini oluşturabilir progenitörlerin gelişim kaderi sonucu incelenmesi ile örneklenmiştir. Bu ifade edilmiştir progenitör hücreler içinde retina kaderi belirleyici faktörleri işlevi hakkında önemli noktanın anlaşılmasını yol açar 8, 9. Bu yaklaşımı kullanarak, birçok kader belirleyici faktörler (örneğin, Vsx1, Atoh7, Ptf1a, Barhl2) hücre hareket ettiklerini göstermiştir-autonomously belirli retina nöronal kaderi sürücü; Gen ifadesinin eksikliği temel olarak demonte gen ile hücreler alternatif bir hücre kaderine 4, 6, 7, 10 benimseyerek canlı kalır, öyle ki bir kader anahtar yol açar. İkincisi, bu tür kimerik deneyler farklı genetik ortamlar içinde geliştiğinde tip ataları nasıl davranacağını vahşi değerlendirmek için de kullanılabilir. Örneğin, genellikle manipüle ana bilgisayar ortamında (örneğin, gen nakavt / demonte) karşısında WT ilgi (ve muhabir transgen) bir gen ifade WT hücrelerinin gelişimini karşılaştırarak, gen ifadesi ve hücre kaderi üzerinde çıkan etkileri değerlendirilebilir . Ev sahibi ortamında bazı nöron tipleri olmaması, örneğin, daha az temsil o ayırma yöntemi önyargılı için onları, hücre otonom-olmayan bir şekilde, yabani tip progenitör davranışını etkilemek için gösterilmiştirNöron türleri 4, 7, 11, 12 eksik r. Retina nöronlar (13 gözden) belirli nöronal kaderi belirleyici gen sırayla zamanlı ifadesi (kader gen ifadesi) tarafından korunmuş histogenez sırayla doğarlar göz önüne alındığında, biz göstermek için bu yöntemleri nasıl kullandığını vahşi tip atalarıdır kader gen ifadesinin zamanlaması Bu tür atalarıdır kaynaklı anormal hücre kompozisyonlar ile retina konak ortamlarda gelişebilir zaman etkilenir. Nispeten standart ve yaygın olarak kullanılan tekniklerin kombinasyonu retina atalarıdır 8, 9 gelişmekte olan kader gen ifadesinin zamanlaması incelenmesini sağlar nasıl Burada delil olarak bu yaklaşımları özetlemektedir. Bu protokol başına kolaylığı ile time-lapse görüntüleme birleştiren deneysel bir yaklaşım anlatılmaktadırex vivo gelişmekte olan zebrafish embriyo nakli oluşturan bireysel mosaically gelişimsel retinogenesis tüm dönem boyunca etiketli hücreleri takip etmek. fonksiyonel gen manipülasyonlar yaparak ya ev sahibi embriyo, donör embriyo, her ikisi veya hiçbiri de, bir gen fonksiyonu hücre özerklik değerlendirebilir. Bu yaklaşım Burada özetlenen bileşenleri tek tek uygun olan herhangi bir başka sistemde benzer araştırma sorularına yaygın adapte edilebilir.

<table border="1" fo:keep-together.within-page="1" fo:keep-with-next.within-page="always">
	<tbody>
		<tr>
			<td>Agarose</td>
			<td>Bioline</td>
			<td>BIO-41025</td>
			<td>Agarose coated dishes can be prepared a few days prior, sealed with parafilm to prevent drying and stored at 4C</td>
		</tr>
		<tr>
			<td>Agarose low melt</td>
			<td>Sigma</td>
			<td>A9414-100G</td>
			<td>Can be prepared in larger volume, microwaved to liquify and then kept molte in 40C waterbath. 1 ml aliquots can be prepared (one for each group of embryos mounted).</td>
		</tr>
		<tr>
			<td>borosillicate glass capillary tube w/o filament</td>
			<td>SDR Scientfic</td>
			<td>30-0035</td>
			<td>alternatives with similar diameter can be used&#160;</td>
		</tr>
		<tr>
			<td>borosillicate glass capillary tube with filament</td>
			<td>SDR Scientfic</td>
			<td>30-0038</td>
			<td>alternatives with similar diameter can be used&#160;</td>
		</tr>
		<tr>
			<td>glass petri dishes (60 mm diameter)</td>
			<td>Science Supply</td>
			<td>1070506</td>
			<td>any glass alternative of any size</td>
		</tr>
		<tr>
			<td>Injection tube (2m)</td>
			<td>Eppendorf</td>
			<td>524616004</td>
			<td>This connects the needle holder to the syringe during transplantation</td>
		</tr>
		<tr>
			<td>Microinjection mold (plastic mold with wedge-shaped protrusions)</td>
			<td>Adaptive Science Tools</td>
			<td>PT-1</td>
			<td>alternatives with similar shape can be use</td>
		</tr>
		<tr>
			<td>microneedle holder</td>
			<td>Narishige</td>
			<td>M-152</td>
			<td>any alternative that fits the outside diameter of the injection needles can be used</td>
		</tr>
		<tr>
			<td>microinjector</td>
			<td>Narishige or Eppendorf Femtojet</td>
			<td></td>
			<td>Pneumatic injector using gas pressure</td>
		</tr>
		<tr>
			<td>micromanipulator</td>
			<td>Coherent Scientific</td>
			<td>M330IR</td>
			<td>similar alternatives can be used</td>
		</tr>
		<tr>
			<td>microloader tip</td>
			<td>Eppendorf</td>
			<td>5242956003</td>
			<td></td>
		</tr>
		<tr>
			<td>Mineral oil</td>
			<td>Sigma</td>
			<td>M5904-500ML</td>
			<td></td>
		</tr>
		<tr>
			<td>needle puller</td>
			<td>Sutter Instruments</td>
			<td>Model P-2000</td>
			<td>Settings used for this puller are: H 430, Fil 4, Vel 50, Del 225, Pul 75. Any needle puller can be used if it results in appropriate tip dimension</td>
		</tr>
		<tr>
			<td>Parafilm</td>
			<td>Interpath</td>
			<td>PM996</td>
			<td>any paraffin film</td>
		</tr>
		<tr>
			<td>Pasteur pipette plastic</td>
			<td>Samco Scientific</td>
			<td>202</td>
			<td></td>
		</tr>
		<tr>
			<td>Pasteur pipette glass</td>
			<td>Hirschmann Laborgeraete</td>
			<td>9260101</td>
			<td></td>
		</tr>
		<tr>
			<td>Pronase</td>
			<td>Sigma</td>
			<td>P5942-25MG</td>
			<td>&#160;Protease Type XIV</td>
		</tr>
		<tr>
			<td>N-phenyl thiourea</td>
			<td>Sigma</td>
			<td>P7629-25G</td>
			<td>PTU is toxic and can be prepared as a stock solution to avoid frequent exposure to the powder, consult MSDS before purchase / use.</td>
		</tr>
		<tr>
			<td>Qiaquick gel extraction</td>
			<td>Qiagen</td>
			<td>28704</td>
			<td>any alternatives to purify DNA can be used</td>
		</tr>
		<tr>
			<td>Rneasy Mini kit</td>
			<td>Qiagen</td>
			<td>74104</td>
			<td>any alternatives to purify RNA can be used</td>
		</tr>
		<tr>
			<td>SP6 mMessage kit</td>
			<td>Qiagen</td>
			<td>AM1340</td>
			<td>any alternatives to transcribe DNA using SP6</td>
		</tr>
	</tbody>
</table>

in vivo imaging of transgenic gene expression in individual retinal progenitors in chimeric zebrafish embryos to study cell nonautonomous influences

Genetik ve teknik güçlü Zebra balığı omurgalı gen manipülasyon sonuçları hızlı gelişim dönemi boyunca in vivo izlenebilmektedir hangi önemli bir model organizmadır yaptık. Çoklu işlemler hücre çoğalması, gen ekspresyonu, hücre göçü ve morfojenezinin içeren incelenebilir. Önemli olarak, transplantasyon ile kimeralar üretimi kolayca mevcut ortamının etkisi altında mozaik etiketleme ve tek tek hücrelerin izleme sağlayan gerçekleştirilebilir. Örneğin, tek tek nakledilen verici hücreler üzerinde (morfolino mikroenjeksiyon yoluyla örneğin) ana embriyo fonksiyonel gen manipülasyonlar ve canlı görüntüleme, ekstrinsik etkileri (genetik olarak modifiye edilmiş bir ortamda sağlanan) hücre otonom olmayan sinyallerin birleştirilmesi ile değerlendirilebilir. İşte biz bu yaklaşım hücre kaderinin tanımlayabiliriz zamanlaması için bir vekil olarak floresan transgen ifadesi başlangıcını karşılaştırmak için kullanılır nasıl göstermekfarklı genetik konak ortamlarda tirme. Bu yazıda, donör hücreleri işaretlemek için ve gen konak embriyolarda demonte, kimerik embriyolar oluşturmak için kullanılan nakli tekniğinin bir açıklama ve hazırlanması ve in vivo time-lapse konfokal çalışan için protokol neden Zebra balığı embriyolar microinjecting için protokol sağlar birden çok embriyo görüntüleme. Bu tür bir gen ifadesinin başlangıcı gibi olaylar zamanlamasını karşılaştırırken Özellikle, birden çok noktaya görüntüleme gerçekleştirmek son derece önemlidir. Bu çoklu kontrol ve eş zamanlı olarak işlenen deneysel embriyolardan veri toplama gerektirir. Böyle bir yaklaşım, kolayca herhangi bir organ ya da görüntüleme yaşamak için erişilebilir seçim dokuda dış etkilerden çalışmaları için uzatılabilir, transplantasyonlar kurulan embriyonik kader haritalarına göre kolayca hedef olabilir şartıyla.

Bu çalışma yabani tip retina atalarıdır bir morphant ev sahibi embriyo içinde geliştiğinde gen ifadesi zamanlama değişiklikleri değerlendirmek için deneysel bir protokol sunar. Deneysel ana embriyolar retina 7, 26 ara doğan yatay ve amacrine internöronlardan eksikliği Ptf1a morphants vardır. Bunlar standart bir kontrol morfolino enjekte edildi konak embriyolar, kontrol karşılaştırılmıştır. <p class="jo...

Watch this Scientific Journal Video about In Vivo Imaging of Transgenic Gene Expression in Individual Retinal Progenitors in Chimeric Zebrafish Embryos to Study Cell Nonautonomous Influences at JoVE.c

In Vivo Imaging of Transgenic Gene Expression in Individual Retinal Progenitors in Chimeric Zebrafish Embryos to Study Cell Nonautonomous Influences

farklı genetik kökenden bireysel WT retina atalarıdır Canlı izleme nöron sırasında hücre özerk olmayan sinyalizasyon katkısı değerlendirilmesi için izin verir. Burada, embriyo transplantasyonu yoluyla ve in vivo time-lapse konfokal görüntüleme gen demonte, kimera nesil bir arada bu amaçla kullanılmıştır.

Kimerik Zebra balığı Embriyolar Bireysel Retina progenitörlerin Transgenik Gen İfade Vivo Görüntüleme Hücre otonom olmayan Etkiler Eğitim için

The genetic and technical strengths have made the zebrafish vertebrate a key model organism in which the consequences of gene manipulations can be traced ...

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Research

JoVE Journal

Developmental Biology

In Vivo Imaging of Transgenic Gene Expression in Individual Retinal Progenitors in Chimeric Zebrafish Embryos to Study Cell Nonautonomous Influences

7.6K Görüntüleme.  The University of Melbourne.  farklı genetik kökenden bireysel WT retina atalarıdır Canlı izleme nöron sırasında hücre özerk olmayan sinyalizasyon katkısı değerlendirilmesi için izin verir. Burada, embriyo transplantasyonu yoluyla ve in vivo time-lapse konfokal görüntüleme gen demonte, kimera nesil bir arada bu amaçla kullanılmıştır. 

Video: In Vivo Imaging of Transgenic Gene Expression in Individual Retinal Progenitors in Chimeric Zebrafish Embryos to Study Cell Nonautonomous Influences

Tracking Cells in GFP-transgenic Zebrafish Using the Photoconvertible PSmOrange System

The rapid development of transparent zebrafish embryos (Danio rerio) in combination with fluorescent labelings of cells and tissues allows visualizing developmental processes as they happen in the living animal. Cells of interest can be labeled by using a tissue specific promoter to drive the expression of a fluorescent protein (FP) for the generation of transgenic lines. Using fluorescent photoconvertible proteins for this purpose additionally allows to precisely follow defined structures within the expression domain. Illuminating the protein in the region of interest, changes its emission spectrum and highlights a particular cell or cell cluster leaving other transgenic cells in their original color. A major limitation is the lack of known promoters for a large number of tissues in the zebrafish. Conversely, gene- and enhancer trap screens have generated enormous transgenic resources discretely labeling literally all embryonic structures mostly with GFP or to a lesser extend red or yellow FPs. An approach to follow defined structures in such transgenic backgrounds would be to additionally introduce a ubiquitous photoconvertible protein, which could be converted in the cell(s) of interest. However, the photoconvertible proteins available involve a green and/or less frequently a red emission state1 and can therefore often not be used to track cells in the FP-background of existing transgenic lines. To circumvent this problem, we have established the PSmOrange system for the zebrafish2,3. Simple microinjection of synthetic mRNA encoding a nuclear form of this protein labels all cell nuclei with orange/red fluorescence. Upon targeted photoconversion of the protein, it switches its emission spectrum to far red. The quantum efficiency and stability of the protein makes PSmOrange a superb cell-tracking tool for zebrafish and possibly other teleost species.

We established the photoconvertible PSmOrange system as a powerful, straight-forward and cost inexpensive tool for in vivo cell tracking in GFP transgenic backgrounds. This protocol describes its application in the zebrafish model system.

Photoconvertible PSmOrange Sistemi kullanılarak GFP transgenik zebrafish hücreleri izleme

The rapid development of transparent zebrafish embryos (Danio rerio) in combination with fluorescent labelings of cells and tissues allows visualizing ...

Gelişim Biyolojisi

Quantitative Analysis of Protein Expression to Study Lineage Specification in Mouse Preimplantation Embryos

This protocol presents a method to perform quantitative, single-cell in situ analyses of protein expression to study lineage specification in mouse preimplantation embryos. The procedures necessary for embryo collection, immunofluorescence, imaging on a confocal microscope, and image segmentation and analysis are described. This method allows quantitation of the expression of multiple nuclear markers and the spatial (XYZ) coordinates of all cells in the embryo. It takes advantage of MINS, an image segmentation software tool specifically developed for the analysis of confocal images of preimplantation embryos and embryonic stem cell (ESC) colonies. MINS carries out unsupervised nuclear segmentation across the X, Y and Z dimensions, and produces information on cell position in three-dimensional space, as well as nuclear fluorescence levels for all channels with minimal user input. While this protocol has been optimized for the analysis of images of preimplantation stage mouse embryos, it can easily be adapted to the analysis of any other samples exhibiting a good signal-to-noise ratio and where high nuclear density poses a hurdle to image segmentation (e.g., expression analysis of embryonic stem cell (ESC) colonies, differentiating cells in culture, embryos of other species or stages, etc.).

This protocol presents a method to perform quantitative, single-cell in situ analysis of protein expression to study lineage specification in mouse preimplantation embryos. The procedures necessary for collection of blastocysts, whole-mount immunofluorescent detection of proteins, imaging of samples on a confocal microscope, and nuclear segmentation and image analysis are described.

Protein İfade Kantitatif Analiz Fare Preimplantasyon Embriyolar Lineage Şartname Eğitim için

This protocol presents a method to perform quantitative, single-cell in situ analyses of protein expression to study lineage specification in mouse ...

Analyzing In Vivo Cell Migration using Cell Transplantations and Time-lapse Imaging in Zebrafish Embryos

Cell migration is key to many physiological and pathological conditions, including cancer metastasis. The cellular and molecular bases of cell migration have been thoroughly analyzed in vitro. However, in vivo cell migration somehow differs from in vitro migration, and has proven more difficult to analyze, being less accessible to direct observation and manipulation. This protocol uses the migration of the prospective prechordal plate in the early zebrafish embryo as a model system to study the function of candidate genes in cell migration. Prechordal plate progenitors form a group of cells which, during gastrulation, undergoes a directed migration from the embryonic organizer to the animal pole of the embryo. The proposed protocol uses cell transplantation to create mosaic embryos. This offers the combined advantages of labeling isolated cells, which is key to good imaging, and of limiting gain/loss of function effects to the observed cells, hence ensuring cell-autonomous effects. We describe here how we assessed the function of the TORC2 component Sin1 in cell migration, but the protocol can be used to analyze the function of any candidate gene in controlling cell migration in vivo.

Analyzing In Vivo Cell Migration using Cell Transplantations and Time-lapse Imaging in Zebrafish Embryos

Combining cell transplantation, cytoskeletal labeling and loss/gain of function approaches, this protocol describes how the migrating zebrafish prospective prechordal plate can be used to analyze the function of a candidate gene in in vivo cell migration.

Analiz<em&gt; İn Vivo</em&gt; Hücre Göç Zebra balığı Embriyolar hücre nakli ve Time-lapse Görüntüleme kullanılarak

Cell migration is key to many physiological and pathological conditions, including cancer metastasis. The cellular and molecular bases of cell migration ...

Directed Differentiation of Primitive and Definitive Hematopoietic Progenitors from Human Pluripotent Stem Cells

One of the major goals for regenerative medicine is the generation and maintenance of hematopoietic stem cells (HSCs) derived from human pluripotent stem cells (hPSCs). Until recently, efforts to differentiate hPSCs into HSCs have predominantly generated hematopoietic progenitors that lack HSC potential, and instead resemble yolk sac hematopoiesis.&#160;These resulting hematopoietic progenitors may have limited utility for in vitro disease modeling of various adult hematopoietic disorders, particularly those of the lymphoid lineages. However, we have recently described methods to generate erythro-myelo-lymphoid multilineage definitive hematopoietic progenitors from hPSCs using a stage-specific directed differentiation protocol, which we outline here. Through enzymatic dissociation of hPSCs on basement membrane matrix-coated plasticware, embryoid bodies (EBs) are formed. EBs are differentiated to mesoderm by recombinant BMP4, which is subsequently specified to the definitive hematopoietic program by the GSK3&#946; inhibitor, CHIR99021. Alternatively, primitive hematopoiesis is specified by the PORCN inhibitor, IWP2. Hematopoiesis is further driven through the addition of recombinant VEGF and supportive hematopoietic cytokines. The resulting hematopoietic progenitors generated using this method have the potential to be used for disease and developmental modeling, in vitro.

Here, we present human pluripotent stem cell (hPSC) culture protocols, used to differentiate hPSCs into CD34+ hematopoietic progenitors. This method uses stage-specific manipulation of canonical WNT signaling to specify cells exclusively to either the definitive or primitive hematopoietic program.

İlkel ve kesin hematopoetik ataları insan Pluripotent kök hücrelerden farklılaşma yönetmen

One of the major goals for regenerative medicine is the generation and maintenance of hematopoietic stem cells (HSCs) derived from human pluripotent stem ...

Biosensing Motor Neuron Membrane Potential in Live Zebrafish Embryos

The protocols described here are designed to allow researchers to study cell communication without altering the integrity of the environment in which the cells are located. Specifically, they have been developed to analyze the electrical activity of excitable cells, such as spinal neurons. In such a scenario, it is crucial to preserve the integrity of the spinal cell, but it is also important to preserve the anatomy and physiological shape of the systems involved. Indeed, the comprehension of the manner in which the nervous system-and other complex systems-works must be based on a systemic approach. For this reason, the live zebrafish embryo was chosen as a model system, and the spinal neuron membrane voltage changes were evaluated without interfering with the physiological conditions of the embryos. 
Here, an approach combining the employment of zebrafish embryos with a FRET-based biosensor is described. Zebrafish embryos are characterized by a very simplified nervous system and are particularly suited for imaging applications thanks to their transparency, allowing for the employment of fluorescence-based voltage indicators at the plasma membrane during zebrafish development. The synergy between these two components makes it possible to analyze the electrical activity of the cells in intact living organisms, without perturbing the physiological state. Finally, this non-invasive approach can co-exist with other analyses (e.g., spontaneous movement recordings, as shown here).

Protocols described here allow for the study of the electrical properties of excitable cells in the most non-invasive physiological conditions by employing zebrafish embryos in an in vivo system together with a fluorescence resonance energy transfer (FRET)-based genetically encoded voltage indicator (GEVI) selectively expressed in the cell type of interest.

Canlı Zebra balığı Embriyolarında Biosense Motor Nöron Membranı Potansiyeli

The protocols described here are designed to allow researchers to study cell communication without altering the integrity of the environment in which the ...

Culture of Adult Transgenic Zebrafish Retinal Explants for Live-cell Imaging by Multiphoton Microscopy

An endogenous regeneration program is initiated by M&#252;ller glia in the adult zebrafish (Danio rerio) retina following neuronal damage and death. The M&#252;ller glia re-enter the cell cycle and produce neuronal progenitor cells that undergo subsequent rounds of cell divisions and differentiate into the lost neuronal cell types. Both M&#252;ller glia and neuronal progenitor cell nuclei replicate their DNA and undergo mitosis in distinct locations of the retina, i.e. they migrate between the basal Inner Nuclear Layer (INL) and the Outer Nuclear Layer (ONL), respectively, in a process described as Interkinetic Nuclear Migration (INM). INM has predominantly been studied in the developing retina. To examine the dynamics of INM in the adult regenerating zebrafish retina in detail, live-cell imaging of fluorescently-labeled M&#252;ller glia/neuronal progenitor cells is required. Here, we provide the conditions to isolate and culture dorsal retinas from Tg[gfap:nGFP]mi2004 zebrafish that were exposed to constant intense light for 35 h. We also show that these retinal cultures are viable to perform live-cell imaging experiments, continuously acquiring z-stack images throughout the thickness of the retinal explant for up to 8 h using multiphoton microscopy to monitor the migratory behavior of gfap:nGFP-positive cells. In addition, we describe the details to perform post-imaging analysis to determine the velocity of apical and basal INM. To summarize, we established conditions to study the dynamics of INM in an adult model of neuronal regeneration. This will advance our understanding of this crucial cellular process and allow us to determine the mechanisms that control INM.

Zebrafish retinal regeneration has mostly been studied using fixed retinas. However, dynamic processes such as interkinetic nuclear migration occur during the regenerative response and require live-cell imaging to investigate the underlying mechanisms. Here, we describe culture and imaging conditions to monitor Interkinetic Nuclear Migration (INM) in real-time using multiphoton microscopy.

Multiphoton Mikroskopi Canlı hücre Görüntüleme için Yetişkin Transgenik Zebra balığı Retina Eksplantlarından Kültür

An endogenous regeneration program is initiated by M&#252;ller glia in the adult zebrafish (Danio rerio) retina following neuronal damage and death. The ...

Live Imaging of Mouse Secondary Palate Fusion

The fusion of the secondary palatal shelves to form the intact secondary palate is a key process in mammalian development and its disruption can lead to cleft secondary palate, a common congenital anomaly in humans. Secondary palate fusion has been extensively studied leading to several proposed cellular mechanisms that may mediate this process. However, these studies have been mostly performed on fixed embryonic tissues at progressive timepoints during development or in fixed explant cultures analyzed at static timepoints. Static analysis is limited for the analysis of dynamic morphogenetic processes such a palate fusion and what types of dynamic cellular behaviors mediate palatal fusion is incompletely understood. Here we describe a protocol for live imaging of ex vivo secondary palate fusion in mouse embryos. To examine cellular behaviors of palate fusion, epithelial-specific Keratin14-cre was used to label palate epithelial cells in ROSA26-mTmGflox reporter embryos. To visualize filamentous actin, Lifeact-mRFPruby reporter mice were used. Live imaging of secondary palate fusion was performed by dissecting recently-adhered secondary palatal shelves of embryonic day (E) 14.5 stage embryos and culturing in agarose-containing media on a glass bottom dish to enable imaging with an inverted confocal microscope. Using this method, we have detected a variety of novel cellular behaviors during secondary palate fusion. An appreciation of how distinct cell behaviors are coordinated in space and time greatly contributes to our understanding of this dynamic morphogenetic process. This protocol can be applied to mutant mouse lines, or cultures treated with pharmacological inhibitors to further advance understanding of how secondary palate fusion is controlled.

Here, we present a protocol for live imaging of mouse secondary palate fusion using confocal microscopy. This protocol can be used in combination with a variety of fluorescent reporter mouse lines, and with pathway inhibitors for mechanistic insight. This protocol can be adapted for live imaging in other developmental systems.

Fare İkincil Palin Füzyonunun Canlı Görüntüsü

The fusion of the secondary palatal shelves to form the intact secondary palate is a key process in mammalian development and its disruption can lead to ...

Application of RNAi and Heat-shock-induced Transcription Factor Expression to Reprogram Germ Cells to Neurons in C. elegans

Studying the cell biological processes during converting the identities of specific cell types provides important insights into mechanism that maintain and protect cellular identities. The conversion of germ cells into specific neurons in the nematode Caenorhabditis elegans (C. elegans) is a powerful tool for performing genetic screens in order to dissect regulatory pathways that safeguard established cell identities. Reprogramming of germ cells to a specific type of neurons termed ASE requires transgenic animals that allow broad over-expression of the Zn-finger transcription factor (TF) CHE-1. Endogenous CHE-1 is expressed exclusively in two head neurons and is required to specify the glutamatergic ASE neurons fate, which can easily be visualized by the gcy-5prom::gfp reporter. A trans gene containing the heat-shock promoter-driven che-1 gene expression construct allows broad mis-expression of CHE-1 in the entire animal upon heat-shock treatment. The combination of RNAi against the chromatin-regulating factor LIN-53 and heat-shock-induced che-1 over-expression leads to reprogramming of germ cell into ASE neuron-like cells. We describe here the specific RNAi procedure and appropriate conditions for heat-shock treatment of transgenic animals in order to successfully induce germ cell to neuron conversion.

Application of RNAi and Heat-shock-induced Transcription Factor Expression to Reprogram Germ Cells to Neurons in C. elegans

This protocol describes how to study cellular processes during cell fate conversion in Caenorhabditis elegans in vivo. Using transgenic animals, allowing heat-shock promoter-driven overexpression of the neuron fate-inducing transcription factor CHE-1 and RNAi-mediated depletion of the chromatin-regulating factor LIN-53 germ cell to neuron reprogramming can be observed in vivo.

Uygulama için yeniden programlamak Germ hücreleri için C. elegans nöronlarda RNAi ve transkripsiyon faktörü ifade ısı şok bağlı

Studying the cell biological processes during converting the identities of specific cell types provides important insights into mechanism that maintain ...

Generation of Scaffold-free, Three-dimensional Insulin Expressing Pancreatoids from Mouse Pancreatic Progenitors In Vitro

The pancreas is a complex organ composed of many different cell types that work together to regulate blood glucose homeostasis and digestion. These cell types include enzyme-secreting acinar cells, an arborized ductal system responsible for the transportation of enzymes to the gut, and hormone-producing endocrine cells. 
Endocrine beta-cells are the sole cell type in the body that produce insulin to lower blood glucose levels. Diabetes, a disease characterized by a loss or the dysfunction of beta-cells, is reaching epidemic proportions. Thus, it is essential to establish protocols to investigate beta-cell development that can be used for screening purposes to derive the drug and cell-based therapeutics. While the experimental investigation of mouse development is essential, in vivo studies are laborious and time-consuming. Cultured cells provide a more convenient platform for screening; however, they are unable to maintain the cellular diversity, architectural organization, and cellular interactions found in vivo. Thus, it is essential to develop new tools to investigate pancreatic organogenesis and physiology.
Pancreatic epithelial cells develop in the close association with mesenchyme from the onset of organogenesis as cells organize and differentiate into the complex, physiologically competent adult organ. The pancreatic mesenchyme provides important signals for the endocrine development, many of which are not well understood yet, thus difficult to recapitulate during the in vitro culture. Here, we describe a protocol to culture three-dimensional, cellular complex mouse organoids that retain mesenchyme, termed pancreatoids. The e10.5 murine pancreatic bud is dissected, dissociated, and cultured in a scaffold-free environment. These floating cells self-assemble with mesenchyme enveloping the developing pancreatoid and a robust number of endocrine beta-cells developing along with the acinar and the duct cells. This system can be used to study the cell fate determination, structural organization, and morphogenesis, cell-cell interactions during organogenesis, or for the drug, small molecule, or genetic screening.

Generation of Scaffold-free, Three-dimensional Insulin Expressing Pancreatoids from Mouse Pancreatic Progenitors In Vitro

Here, we present a protocol to generate insulin expressing 3D murine pancreatoids from free-floating e10.5 dissociated pancreatic progenitors and the associated mesenchyme.

İskele-free, üç boyutlu insülin ifade Pancreatoids fare pankreas ataları Vitro gelen nesil

The pancreas is a complex organ composed of many different cell types that work together to regulate blood glucose homeostasis and digestion. These cell ...

Visualizing the Node and Notochordal Plate In Gastrulating Mouse Embryos Using Scanning Electron Microscopy and Whole Mount Immunofluorescence

The post-implantation mouse embryo undergoes major shape changes after the initiation of gastrulation and morphogenesis. A hallmark of morphogenesis is the formation of the transient organizers, the node and notochordal plate, from cells that have passed through the primitive streak. The proper formation of these signaling centers is essential for the development of the body plan and techniques to visualize them are of high interest to mouse developmental biologists. The node and notochordal plate lie on the ventral surface of gastrulating mouse embryos around embryonic day (E) 7.5 of development. The node is a cup-shaped structure whose cells possess a single slender cilium each. The proper subcellular localization and rotation of the cilia in the node pit determines left-right asymmetry. The notochordal plate cells also possess single cilia albeit shorter than those of the node cells. The notochordal plate forms the notochord which acts as an important signaling organizer for somitogenesis and neural patterning. Because the cells of the node and notochordal plate are transiently present on the surface and possess cilia, they can be visualized using scanning electron microscopy (SEM). Among other techniques used to visualize these structures at the cellular level is whole mount immunofluorescence (WMIF) using the antibodies against the proteins that are highly expressed in the node and notochordal plate. In this report, we describe our optimized protocols to perform SEM and WMIF of the node and notochordal plate in developing mouse embryos to help in the assessment of tissue shape and cellular organization in wild-type and gastrulation mutant embryos.

The node and notochordal plate are transient signaling organizers in developing mouse embryos that can be visualized using several techniques. Here, we describe in detail how to perform two of the techniques to study their structure and morphogenesis: 1) scanning electron microscopy (SEM); and 2) whole mount immunofluorescence (WMIF).

Düğüm ve Notochordal plaka Gastrulating fare embriyo Tarama elektron mikroskobu ve bütün Dağı ayirt kullanarak görselleştirme

The post-implantation mouse embryo undergoes major shape changes after the initiation of gastrulation and morphogenesis. A hallmark of morphogenesis is ...