A Fast and Quantitative Method for Post-translational Modification and Variant Enabled Mapping of Peptides to Genomes
9.1K Views
•
09:10 min
•
May 22nd, 2018
DOI :
May 22nd, 2018
•Christoph N. Schlaffner1,2,3, Georg J. Pirklbauer2, Andreas Bender3, Judith A.J. Steen1, Jyoti S. Choudhary2,4
1Department of Neurobiology, F. M. Kirby Neurobiology Center, Boston Children's Hospital, Harvard Medical School, 2Proteomic Mass Spectrometry, Wellcome Trust Sanger Institute, Wellcome Genome Campus, 3Centre for Molecular Informatics, Department of Chemistry, University of Cambridge, 4Functional Proteomics Group, Chester Beatty Laboratories, Institute of Cancer Research
Chapters in this video
0:05
Title
0:51
Mapping of Peptides using PoGoGUI
2:36
Visualizing in the Integrative Genomics Viewer
3:57
Mapping Peptides Identified Through a Custom Variant Database to a Reference Genome
4:44
Mapping Peptides from Multiple Files Using PoGoGUI
5:48
Generating a Track Hub from Mapped Peptides and Visualizing a Track Hub in the UCSC Genome Browser
6:50
Results: Post-translational Modification and Varient Enabled Mapping of Peptides to Genomes
8:21
Conclusion
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