We would like to thank Mellissa Keller and Wendy Hetman for their assistance with manuscript and figure review.

This protocol follows the guidelines of Lifenet Health&#39;s ethics committee. The manuscript does not contain any studies with human participants or animal studies performed by any of the authors. All cells were isolated from donor tissue fully consented for research purposes by Lifenet Health.
1. Medium preparation
<ol>
	<li>Thaw one bottle each feeder cell thawing medium, supplement A, supplement B, and supplement C (see Table of Materials) in a 37 &#176;C water bath or 16-24 h at 4 &#176;C.</li>
	<li>Aliquot the entire bottle (10 mL) of feeder cell thawing medium into a 15 mL or 50 mL conical tube. 
	NOTE: The size of the cell pellet will be easier to view using a 15 mL conical tube.</li>
	<li>Add 4.5 mL of supplement B and 11 mL of supplement A to one bottle of plating medium (75 mL) (see Table of Materials) to make a complete plating medium. 
	NOTE: Complete plating medium has a concentration of FBS &#60;5% v/v.</li>
	<li>Into a separate bottle, add 100 mL of culture medium (see Table of Materials), 1 mL supplement C, and 14 mL supplement A to make a complete culture medium. 
	NOTE: Complete culture medium has a concentration of FBS &#60;1% v/v</li>
	<li>Store remaining supplement C and supplement A at -20 &#176;C until week 2 medium preparation. 
	&#8203;NOTE: Repeated freeze-thaw cycles will reduce the shelf life of the supplements. It is recommended to only freeze-thaw one time.</li>
	<li>Prior to use, warm 10 mL of feeder cell thawing medium, hepatocyte thawing medium, complete plating medium, and complete culture medium for 20-30 min in a 37 &#176;C water bath.</li>
</ol>
2. Thawing, counting, and plating human feeder cells (Figure 1A)
<ol>
	<li>Culture the feeder cells approximately 1 h prior to seeding PHHs. Thaw feeder cells (see Table of Materials) in a 37 &#176;C water bath for 1-2 min. 
	NOTE: Avoid prolonged exposure (e.g., &#62;2 min) by monitoring thawing and removing the vial when liquid becomes loose in the cryovial when inverted.</li>
	<li>Immediately after thawing, place the feeder cells on ice.</li>
	<li>Using aseptic techniques, in a biosafety cabinet (BSC), add freshly thawed cells to 10 mL of feeder cell thawing medium.</li>
	<li>Use a 1000 &#181;L pipette to wash the vial once with 1 mL of cell/thaw medium suspension and collect.</li>
	<li>Spin at 400 x g for 4 min at room temperature (RT).</li>
	<li>Carefully discard the supernatant to not disturb the cell pellet by pipetting or vacuum aspiration. Resuspend cell pellet in 1 mL of complete plating medium and count the feeder cells. 
	NOTE: Feeder cells can be counted using acridine orange and propidium iodide (AOPI) on an automated cell counter or trypan blue using a hemacytometer. Cell counts may vary depending on technology and user. For best results, count duplicate samples and remain consistent in the chosen methodology.</li>
	<li>Dilute the cell suspension to 100,000 cells/mL using the complete plating medium.</li>
	<li>Plate 500 &#181;L (50,000 cells) per well of the diluted cell suspension onto a collagen-coated 24-well plate (see Table of Materials).</li>
	<li>Shake the plate in a North (N)-South (S)-East (E)-West (W) motion by using a back-and-forth motion in the N-S direction 2 times followed by the same motion E-W. Repeat this shaking protocol 2 more times for a total of 3 rounds. 
	NOTE: Perform shaking using moderate force to avoid splashing on the plate lid while still assisting in cell distribution (please refer to video).</li>
	<li>Incubate at 37 &#176;C/5% CO2 for 60 min.</li>
	<li>View feeder cell attachment before proceeding to thawing hepatocytes. 
	&#8203;NOTE: Acceptable feeder cell attachment is visually approximately 50% confluent.</li>
</ol>
3. Thawing, counting, and plating primary human hepatocytes (Figure 1B)
<ol>
	<li>Following 30 min of feeder cell culture, filter pre-warmed hepatocyte thawing medium through a 0.2 &#181;m polyethersulfone (PES) filter unit.</li>
	<li>Thaw PHHs in a 37 &#176;C water bath for 1-2 min. 
	NOTE: Avoid prolonged exposure (e.g., &#62;2 min) by monitoring thawing and removing the vial when liquid becomes loose in the cryovial when inverted.</li>
	<li>Immediately after thawing, place PHHs on ice.</li>
	<li>In a BSC, pour PHH suspension into the hepatocyte thawing medium. 
	NOTE: Avoid pipetting PHH cell suspensions when possible. It is most critical to perform no pipetting during the transfer of thawed PHHs from the cryovial to the thawing medium.</li>
	<li>Use a 1000 &#181;L pipette to wash the vial 3-4 times by gently pipetting 1 mL of hepatocyte/thaw medium suspension back into the vial and collecting the wash by pouring it back into the thaw medium.</li>
	<li>Cap and gently invert thawed PHH suspension 5 times.</li>
	<li>Spin at 100 x g for 8 min at RT.</li>
	<li>Carefully discard the supernatant to not disturb the cell pellet by pipetting or vacuum aspiration. To the wall of the conical tube, add 3 mL of complete plating medium.</li>
	<li>Rock the conical tube side to side to resuspend the cell pellet.</li>
	<li>Add an additional 5 mL of complete plating medium to the resuspended hepatocytes.</li>
	<li>Count PHHs. 
	NOTE: PHHs can be counted using AOPI on an automated cell counter or trypan blue using a hemacytometer. Cell counts may vary depending on technology and user. For best results, count duplicate samples and remain consistent in the chosen methodology.</li>
	<li>Dilute the cell suspension to the desired seeding density (300,000-600,000 PHHs/mL) using the complete plating medium. 
	NOTE: Optimal hepatocyte seeding density may vary from lot to lot. The recommended seeding density for a given lot will be provided in the certificate of analysis (COA). Use the below equation to determine hepatocytes/mL for a 24-well plate. 
	<img alt="Equation 1" src="/files/ftp_upload/65992/65992eq01.jpg" style="margin: auto;" /></li>
	<li>From the plated feeder cells, remove the medium by pipetting or vacuum aspiration. 
	NOTE: To ensure the viability of the feeder cells, it is recommended to change no more than 3 wells at a time.</li>
	<li>Immediately plate 500 &#181;L (150,000-300,000 cells) per well of the diluted hepatocyte suspension onto the pre-coated collagen 24-well plate containing feeder cells.</li>
	<li>Shake the plate in a&#160;N-S-E-W motion by using a back-and-forth motion in the N-S direction 2 times followed by the same motion E-W. Repeat this shaking protocol 2 more times for a total of 3 rounds. 
	NOTE: Perform shaking using moderate force to avoid splashing on the plate lid while still assisting in cell distribution.</li>
	<li>Incubate at 37 &#176;C/5% CO2 for 2-4 h. For the first 60 min of culture, shake the plate every 15 min in N-S-E-W motion as in step 3.15 above.</li>
	<li>Following incubation, remove the plate from the incubator and place it in BSC.</li>
	<li>Shake the plate and remove the complete plating medium by pipetting or vacuum aspiration. 
	&#8203;NOTE: To ensure the viability of the culture, it is recommended to change no more than 3 wells at a time.</li>
	<li>Immediately add 500 &#181;L of pre-warmed complete culture medium to each well.</li>
</ol>
4. Maintenance
<ol>
	<li>Aliquot and pre-warm complete culture medium in a 37 &#176;C water bath for 20-30 min. Approximately 13.5 mL of medium is needed for one 24-well plate.</li>
	<li>Feed cultures daily with 500 &#181;L per well of fresh, pre-warmed complete culture medium. 
	NOTE: To ensure the viability of the culture, it is recommended to change no more than 3 wells at a time.</li>
	<li>Prepare fresh complete culture medium every 7 days.</li>
</ol>
5. Collection of culture supernatant samples for measurement of albumin and urea
<ol>
	<li>At days 7, 10, and 14, collect 500 &#181;L of medium from the desired sample well(s) into a microcentrifuge tube(s), as shown in Figure 1C.</li>
	<li>Spin the sample(s) at 320 x g for 10 min at 4 &#176;C to pellet debris.</li>
	<li>Use a pipette to transfer sample supernatant(s) into new microcentrifuge tube(s), avoiding disruption of the pellet.</li>
	<li>Run the samples on the albumin and/or urea assay (see sections 10 and 11, respectively). 
	&#8203;NOTE: Samples can be stored at -20 &#176;C to -80 &#176;C for 2 weeks.</li>
</ol>
6. Staining day I
CAUTION: Fixation buffer contains Paraformaldehyde. Paraformaldehyde can cause eye damage, skin irritation, and organ toxicity. Work in an area with good ventilation and wear appropriate personal protection equipment (PPE).
<ol>
	<li>Following the collection of medium samples on day 14, add 300 &#181;L of fixation buffer (see Table of Materials) to each well to be stained, as shown in Figure 1C. Stain a minimum of 2 wells.</li>
	<li>Incubate at 4 &#176;C for 20-60 min.</li>
	<li>Prepare 1x permeabilization buffer (see Table of Materials) by adding 5 mL of 10x stock solution to 45 mL of 1x PBS (see Table of Materials). 
	NOTE: The 1x permeabilization buffer can be stored at 4&#176; C for 1 month.</li>
	<li>Wash 2 times with 300 &#181;L of 1x permeabilization buffer on ice.</li>
	<li>Add 300 &#181;L of primary antibody cytokeratin 18 (see Table of Materials) using a 1:1000 dilution in 1x permeabilization buffer on ice. 
	&#8203;NOTE: Minimally, incubate one well with 1x permeabilization buffer only for a secondary antibody-only control.</li>
	<li>Incubate 16-24 h at 4 &#176;C.</li>
</ol>
7. Staining day II
<ol>
	<li>The following day, remove the primary antibody by pipetting or vacuum aspiration.</li>
	<li>Wash 2 times with 300 &#181;L per well of 1x permeabilization buffer on ice.</li>
	<li>Add 300 &#181;L of fluorescent secondary antibody (see Table of Materials) using a 1:500 dilution in 1x permeabilization buffer (include secondary only control). 
	NOTE: Avoid light when using fluorescent antibodies.</li>
	<li>Incubate for 30-45 min at 4 &#176;C in dark.</li>
	<li>Remove the secondary antibody by pipetting or vacuum aspiration.</li>
	<li>Wash 2 times with 300 &#181;L per well of 1x permeabilization buffer on ice.</li>
	<li>Wash 1 time with 300 &#181;L per well of 1x PBS.</li>
	<li>Add 150 &#181;L of 4&#8242;,6-diamidino-2-phenylindole (DAPI) mounting medium (see Table of Materials) to each well and incubate for 15 min at RT in the dark. 
	NOTE: Plate can be wrapped in parafilm and stored at 4 &#176;C in the dark for 1 week.</li>
	<li>View under a fluorescent microscope. Capture 5 images of each specific fluorescent channel for each well using the 10x objective lens (ensure one image has a scale bar). 
	&#8203;NOTE: DAPI has an excitation/emission of 358 nm/461 nm. Use a fluorescent microscope equipped with the appropriate detection filters for both DAPI and the secondary antibody fluorophore.</li>
</ol>
8. ImageJ analysis (Figure 2)
NOTE: It is recommended to use ImageJ Version 1.52a or higher.
<ol>
	<li>Open an image containing a scale bar in ImageJ. Click the Straight Line icon and draw a line to the exact length of the scale bar [Figure 2 (1)] 
	NOTE: If needed, click the Magnify Glass icon to zoom in or out.</li>
	<li>Click on the Analyze tab. Highlight and click Set Scale.</li>
	<li>Change Known Distance to the distance of the scale bar. Change Units of Length to the units of the scale bar. Globally apply the settings by checking Global. Click OK to set the scale. 
	NOTE: Once this setting is applied, every image opened will show the calculated area of the field of view in units input by the user.</li>
	<li>Open a DAPI-only image in ImageJ. Click on the Process tab and highlight Subtract Background. Remove the background 50 pixels at a time until the unstained areas are black. 
	NOTE: If the image does not contain background, this step is not required.</li>
	<li>Click Image tab and highlight Type. Click on 8-bit to make the image grayscale [Figure 2 (2)].</li>
	<li>Threshold the image manually or automatically to include all the DAPI particles (use caution not to manually over the threshold) [Figure 2 (3)]. Click the Image tab and highlight Adjust. Click Threshold. Click Apply when complete.</li>
	<li>Click the Process tab and highlight Binary. Click Watershed.</li>
	<li>Click the Analyze tab and highlight /click Analyze Particles [Figure 2 (4)]. Set the Size to 5-Infinity and Circularity to 0.00-1.00. In the Show drop-down tab, select Outlines. Ensure Display Results, Summarize, and Include Holes are checked. Click OK. 
	NOTE: The desired particle range can be adjusted if thresholding yields background pixels.</li>
	<li>Record the count result as TOTAL DAPI.</li>
	<li>Open a merged Cytokeratin 18/DAPI image in ImageJ.</li>
	<li>Use the Multi-Point [Figure 2 (5)] icon to count all DAPI particles unstained for Cytokeratin 18 manually.</li>
	<li>Record result as FEEDER CELLS. Use the equation below to determine hepatocyte DAPI. 
	Hepatocyte DAPI = Total DAPI - Feeder Cell DAPI</li>
</ol>
9. Quantitation of total attached hepatocytes and percent attachment (Plateability)
<ol>
	<li>Create a scale factor for the 24-well culture area using the equation below. Field of view measurements can be found at the top of each image opened [Figure 2 (2), green box]. 
	<img alt="Equation 3" src="/files/ftp_upload/65992/65992eq03.jpg" style="margin: auto;" /></li>
	<li>Calculate the total attached hepatocytes using the equation below. 
	Attached Hepatocytes = Scale factor&#160;&#215;&#160;Hepatocyte DAPI</li>
	<li>Calculate the percent attachment of the hepatocytes using the equation below. 
	<img alt="Equation 5" src="/files/ftp_upload/65992/65992eq05.jpg" style="margin: auto;" /></li>
</ol>
10. Albumin assay
<ol>
	<li>Measure the albumin production using a sandwich enzyme-linked immunosorbent assay (ELISA) (see Table of Materials) on samples diluted at 1:200. 
	NOTE: For accuracy, the user confirms that the samples fall within the standard curve linear range. The specified kit provides all materials and instructions to perform the assay.</li>
	<li>Normalize sample concentrations to attached hepatocytes using the equation below. 
	<img alt="Equation 6" src="/files/ftp_upload/65992/65992eq06.jpg" style="margin: auto;" /></li>
</ol>
11. Urea assay
CAUTION: Blood urea nitrogen (BUN) acid reagent contains sulfuric acid. The sulfuric acid concentration in the BUN acid reagent is considered corrosive. Do not ingest. Work in an area with good ventilation and wear appropriate PPE.
<ol>
	<li>Urea synthesis is measured using a modified diacetyl monoxime method (see Table of Materials).</li>
	<li>Dilute 53.3 &#181;L of 75 mg/dL urea into 346.7 &#181;L of complete culture medium to make Standard #1 (100 &#181;g/mL)</li>
	<li>Label tubes 2-8 and use a 1:2 serial dilution to make the urea assay standards (Table 1).</li>
	<li>Add 10 &#181;L of sample or standard to wells of a black-walled, clear bottom 96-well plate (see Table of Materials).</li>
	<li>Add 150 &#181;L of BUN reagent to each well containing sample. Prepare BUN reagent by mixing 1/3 of BUN color reagent with 2/3 BUN acid reagent. Use the equation below to assist in calculations. 
	<img alt="Equation 7" src="/files/ftp_upload/65992/65992eq07.jpg" style="margin: auto;" /> 
	BUN color reagent (mL) = Total BUN Reagent Needed &#215; 0.333 
	BUN acid reagent (mL) = Total BUN Reagent Needed&#160;&#215; 0.667</li>
	<li>Incubate plate for 90 min in an oven or incubator at 60 &#176;C.</li>
	<li>Read the plate absorbance immediately at 540 nm and 650 nm.</li>
	<li>Create a standard curve by subtracting blank and background absorbance (650 nm) from all samples and standards. Generate a best-fit line by linear regression analysis.</li>
	<li>Determine unknown sample concentration from the standard curve.</li>
	<li>Normalize the sample concentrations to attached hepatocytes using the equation below. 
	<img alt="Equation 10" src="/files/ftp_upload/65992/65992eq10.jpg" style="margin: auto;" /></li>
</ol>

A Physiologically-Relevant All-Human 2D+ Hepatic System for Drug Discovery

<ol>
	<li>Khetani, S. R., Bhatia, S. N. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Microscale+culture+of+human+liver+cells+for+drug+development.">Microscale culture of human liver cells for drug development.</a> Nature Biotechnology. 26 (1), 120-126 (2008).</li><li>Swift, B., Pfeifer, N. D., Brouwer, K. L. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Sandwich-cultured+hepatocytes:+an+in+vitro+model+to+evaluate+hepatobiliary+transporter-based+drug+interactions+and+hepatotoxicity.">Sandwich-cultured hepatocytes: an in vitro model to evaluate hepatobiliary transporter-based drug interactions and hepatotoxicity.</a> Drug Metabolism Reviews. 42 (3), 446-471 (2010).</li><li>Baudy, A. R., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Liver+microphysiological+systems+development+guidelines+for+safety+risk+assessment+in+the+pharmaceutical+industry.">Liver microphysiological systems development guidelines for safety risk assessment in the pharmaceutical industry.</a> Lab on a Chip. 20 (2), 215-225 (2020).</li><li>Glicklis, R., Merchuk, J. C., Cohen, S. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Modeling+mass+transfer+in+hepatocyte+spheroids+via+cell+viability,+spheroid+size,+and+hepatocellular+functions.">Modeling mass transfer in hepatocyte spheroids via cell viability, spheroid size, and hepatocellular functions.</a> Biotechnology and Bioengineering. 86 (6), 672-680 (2004).</li><li>Khetani, S. R., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Microengineered+liver+tissues+for+drug+testing.">Microengineered liver tissues for drug testing.</a> Journal of Laboratory Automation. 20 (3), 216-250 (2015).</li><li>Monckton, C. P., Brown, G. E., Khetani, S. R. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Latest+impact+of+engineered+human+liver+platforms+on+drug+development.">Latest impact of engineered human liver platforms on drug development.</a> APL Bioengineering. 5 (3), 031506 (2021).</li><li>Ware, B. R., Durham, M. J., Monckton, C. P., Khetani, S. R. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=A+cell+culture+platform+to+maintain+long-term+phenotype+of+primary+human+hepatocytes+and+endothelial+cells.">A cell culture platform to maintain long-term phenotype of primary human hepatocytes and endothelial cells.</a> Cellular and Molecular Gastroenterology and Hepatology. 5 (3), 187-207 (2018).</li><li>Weaver, J. R., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=The+morphology,+functionality,+and+longevity+of+a+novel+all+human+hepatic+cell-based+tri-culture+system.">The morphology, functionality, and longevity of a novel all human hepatic cell-based tri-culture system.</a> Toxicology In Vitro. 86, 105504 (2023).</li><li>Li, W., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Matrix+stiffness+and+shear+stresses+modulate+hepatocyte+functions+in+a+fibrotic+liver+sinusoidal+model.">Matrix stiffness and shear stresses modulate hepatocyte functions in a fibrotic liver sinusoidal model.</a> American Journal of Physiology, Gastrointestinal and Liver Physiology. 320 (3), G272-G282 (2021).</li><li>Thompson, S. M., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Heat+stress+induced+cell+death+mechanisms+in+hepatocytes+and+hepatocellular+carcinoma:+in+vitro+and+in+vivo+study.">Heat stress induced cell death mechanisms in hepatocytes and hepatocellular carcinoma: in vitro and in vivo study.</a> Lasers in Surgery and Medicine. 46 (4), 290-301 (2014).</li><li>Mooney, D., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Switching+from+differentiation+to+growth+in+hepatocytes:+control+by+extracellular+matrix.">Switching from differentiation to growth in hepatocytes: control by extracellular matrix.</a> Journal of Cellular Physiology. 151 (3), 497-505 (1992).</li><li>Berthiaume, F., Moghe, P. V., Toner, M., Yarmush, M. L. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Effect+of+extracellular+matrix+topology+on+cell+structure,+function,+and+physiological+responsiveness:+hepatocytes+cultured+in+a+sandwich+configuration.">Effect of extracellular matrix topology on cell structure, function, and physiological responsiveness: hepatocytes cultured in a sandwich configuration.</a> The FASEB Journal. 10 (13), 1471-1484 (1996).</li><li>Hamilton, G. A., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Regulation+of+cell+morphology+and+cytochrome+P450+expression+in+human+hepatocytes+by+extracellular+matrix+and+cell-cell+interactions.">Regulation of cell morphology and cytochrome P450 expression in human hepatocytes by extracellular matrix and cell-cell interactions.</a> Cell and Tissue Research. 306 (1), 85-99 (2001).</li><li>Orkin, R. W., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=A+murine+tumor+producing+a+matrix+of+basement+membrane.">A murine tumor producing a matrix of basement membrane.</a> Journal of Experimental Medicine. 145 (1), 204-220 (1977).</li><li>Sivaraman, A., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=A+microscale+in+vitro+physiological+model+of+the+liver:+predictive+screens+for+drug+metabolism+and+enzyme+induction.">A microscale in vitro physiological model of the liver: predictive screens for drug metabolism and enzyme induction.</a> Current Drug Metabolism. 6 (6), 569-591 (2005).</li><li>Goulet, F., Normand, C., Morin, O. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Cellular+interactions+promote+tissue-specific+function,+biomatrix+deposition+and+junctional+communication+of+primary+cultured+hepatocytes.">Cellular interactions promote tissue-specific function, biomatrix deposition and junctional communication of primary cultured hepatocytes.</a> Hepatology. 8 (5), 1010-1018 (1988).</li><li>Odanga, J. J., Breathwaite, E. K., Presnel, S., LeCluyse, E. L., Weaver, J. R. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Characterization+of+primary+human+hepatocytes+from+diseased+and+healthy+livers+in+an+all-human+cell+based+triculture+system.+The+Toxicologist,+a+Supplement+to+Toxicological+Sciences.">Characterization of primary human hepatocytes from diseased and healthy livers in an all-human cell based triculture system. The Toxicologist, a Supplement to Toxicological Sciences.</a> , 4283 (2023).</li></ol>

JO, LW, EG, EL, SP, and JW are employees of LifeNet Health, the non-profit organization that produces TV2D+.

The described hepatic culture system can be established in laboratories that are equipped with standard tissue culture instrumentation. Comprised of PHHs cultured with feeder cells, the system allows the user to culture PHHs for at least two weeks with stable albumin production and urea synthesis. Because of PHH donor lot variability, only pre-screened and qualified PHHs are recommended for use in the system. Although the number of attached PHHs varies based on donor lot and seeding density, the relative plateability remains similar within each donor lot. While recommended seeding densities are advised, the above data suggest hepatocyte seeding density can be adjusted for different experimental needs; however, it should be noted that seeding a greater number of PHHs may not provide higher or more consistent functional outputs. Analysis of the PHH lots evaluated showed the lowest CV for albumin production and urea synthesis using lower seeding densities of 150,000 PHHs/well and 200,000 PHHs/well; however, no significant differences were found between albumin and urea at any seeding density. Higher seeding densities of 250,000 PHHs/well and 300,000 PHHs/well show a greater decrease in albumin and urea over the 14-day culture period. Inherent donor variability in plateability may affect the consistency of albumin production and urea synthesis at 250,000 PHHs/well and 300,000 PHHs/well for the tested donor lots. Similar to large hepatocyte spheroids, overseeding PHHs in the TV2D+ system may have negative effects on the long-term culture and functionality of PHHs.
All steps in thawing, plating, and maintenance are critical for successful culture and data generation; however, there are several common mistakes inexperienced users can avoid. PHHs are highly susceptible to damage secondary to temperature fluctuation, shear stress, and exposure to air9,10. Precautions should be taken when thawing PHHs to avoid prolonged thawing time frames and excessive pipetting. The use of a hand pouring method, a timer, and immediate transfer from water bath to ice will reduce these common errors that can affect the viability and plateability of the PHHs. Additionally, with supply chain issues becoming more commonplace, it may be difficult to obtain collagen-coated plates. Manual coating of tissue culture-treated plates using commercial solutions of collagen type I (5-10 &#181;g/cm2) can be used to overcome this issue; however, for optimal performance and consistency, it is recommended to use pre-coated collagen plates. In the process of transition from feeder cell-only culture to the introduction of PHHs, it is critical to prevent the feeder cell layer from drying. Never allow air exposure to the feeder cells. Any air exposure time may lead to poor feeder cell layer quality, which will negatively impact the long-term culture of PHHs. It is best practice to allow a small amount of residual medium to remain between medium changes. On occasion, PHHs may contain excess debris from isolation, which can make viewing morphology difficult. To help with this issue, shake the plate before a medium change and use vacuum aspiration. Finally, when performing a medium change, carefully aspirate the spent medium, taking care not to disturb the cultured cells. Pipette fresh medium volume down the side of the well to avoid pipetting directly onto the cell layer. The user should also avoid air exposure at every medium change, using the recommended 3-well change (Sections 3 and 4). It should also be noted that a daily medium change is ideal but not required.
Although fluorescent microscopes have become common in most labs, software needed to perform specific image analysis can incur additional expenses. ImageJ can be downloaded for free, making it an easily accessible image analysis tool. The steps in the protocol provide a basis to which the user may need to optimize, specifically particle analysis of DAPI staining; however, in the absence of fluorescent imaging capability, PHH attachment values at day 14 are provided on lot-specific certificates of analysis. Poor thresholding will result in inaccurate counting of the DAPI particles. It is also recommended to check the surface area of individual DAPI particles prior to setting a size exclusion. This can be achieved by using the Oval icon [Figure 2 (1), circle icon below the Edit tab] and drawing a circle that encompasses the DAPI particle. The Analyze tab can then be used to measure the area of the selected DAPI particle. Specific measurements can be selected using the Set Measurements under the Analyze tab [step 8.9 and Figure 2 (4)].
Current methods for culturing PHHs involve the use of coatings such as collagen-I for increasing cell attachment in traditional 2-dimensional monoculture11 or overlaying with an extracellular matrix, like the murine-based Matrigel, a technique commonly referred to as &#34;sandwich culture&#34;12,13,14,15. While the sandwich culture technique improves PHH morphology and polarity over time compared to traditional monoculture, both approaches still lack long-term phenotypic stability in culture for most plateable lots of PHHs. Another method used to culture PHHs is making 3D spheroids; however, as previously stated by Glicklis et al.4, there can be technical challenges with reproducibility of spheroid size due to donor variability. In an effort to make a more physiologically relevant liver model, multicellular models have been developed. As described by Ware et al.7, using micropatterning, murine fibroblasts and primary human liver sinusoid endothelial cells surrounded by PHHs enabled longer in vitro culture times. However, micropatterning can be a complex and time-consuming process, and the non-human feeder cells may contribute to background in metabolic signals, limiting the utility of this platform in certain applications. The use of various non-liver cells, including human and rat dermal fibroblasts and bovine aorta endothelial cells as feeder cells for co-culture of hepatocytes have shown albumin secretion and tight junction formation similar to co-cultures of feeder cells of liver origin16. However, the mechanism of interactions between TV2D+ non-liver feeder cells and the PHHs in culture needs to be further investigated to better understand the influence on the stability and functionality of the PHHs in this system. The culture system previously described by Weaver et al.8 can successfully culture PHHs in hepatic colonies for up to 42 days, forming extensive bile canalicular networks. The PHHs cultured in this system maintained key hepatic functionality, including Cytochrome 1A2, 2B6, and 3A4 activity and Uridine 5&#8242;-diphospho-glucuronosyltransferase (UGT)-based enzyme activity, phase I and II metabolite formation, albumin production, and urea synthesis for at least 22 days in vitro with no Matrigel. This culture system produces stable, physiologically relevant outputs that are readily adaptable to any lab for pharmacological and toxicological applications. Although key PHH functions are maintained in the TV2D+ system, no direct comparisons have been made to the 3D spheroid model; however, future work comparing the same PHH donors between the culture systems will prove valuable in determining the limits and advantages of both methods.
Potential applications of TV2D+ include evaluation of metabolic clearance and drug-drug interactions of low-turnover compounds, drug-induced liver injury, and risk assessment of agrochemicals. Accurately predicting hepatic clearance of new and emerging drugs relies on a stable and prolonged PHH culture with retention of key hepatocellular functionality, which is particularly challenging when evaluating low-turnover compounds. Additionally, risk assessment and chemical-induced liver toxicity are major health concerns, and current models do not provide the long-term stability and functionality in culture to accurately evaluate potential chronic chemical toxicity that may be secondary to acute exposure. Healthy and diseased PHHs cultured in TV2D+ showed characteristic differences in function and lipid disposition that were retained over time17. These studies support TV2D+ as a promising tool for a variety of pharmacological and toxicological applications.

Predicting therapeutic safety and efficacy is an important part of preclinical drug development. However, conventional preclinical in vitro hepatic models are limited in their ability to accurately mimic the in vivo liver cellular microenvironment and maintain hepatocyte functionality and morphology over time. There is a need for models that provide stable metabolic competence for more than 1 week to assess slow-turnover compounds or investigate outcomes associated with sub-acute or chronic exposure. In vivo animal tests often fail to predict drug efficacy and risk due to translational species differences in human hepatic clearance mechanisms1. Current in vitro 2-dimensional (2D) hepatic models, such as traditional primary human hepatocyte (PHH) monoculture or sandwich cultures, lack phenotypic stability and longevity in culture, leading to loss of key hepatocellular function and architectural integrity over time2. An alternative method involves the formation of 3-dimensional (3D) hepatocyte spheroids, offering a more relevant microenvironment versus 2D culture. However, this method is limited by the availability of raw materials, PHH donor-lot selection, reproducibility, and loss of viability with increasing spheroid size3,4,5,6. Multicellular platforms have been introduced whereby PHHs are seeded with feeder cells onto fixed-sized, micropatterned plates. Though these models may enable longer culture times, non-human feeder cells used in these platforms can alter experimental outcomes and limit their application due to innate background contribution to drug clearance and metabolic profiles1,7. The TruVivo all-human 2D+ hepatic system (TV2D+) recently described in Weaver, et al8, was developed to address some of the limitations of traditional, co-culture, and 3D culture methods of PHHs. The non liver feeder cells reduce the interspecies differences in metabolism and paracrine production and provide the support necessary for primary hepatocytes in a reproducible, robust fashion that cannot be provided by corresponding non-parenchymal liver cells from a single donor lot due to limitations in expansion, phenotype, and performance. The feeder cells chosen were able to be consistently expanded before use and lacked the need for transformation or differentiation. As described by Glicklis et al.4 and Khetani et al.5, 3D culture models like hepatocyte spheroids have challenges with reproducibility due to donor variability and maintaining consistency in spheroid size, which affects nutrient diffusion in spheroids greater than 200 &#181;m, leading to decreased viability and functionality. Like 3D spheroid formation, the TV2D+ system relies on self-assembly of PHHs; however, the PHH colonies formed are dispersed over the surface area of the well at a single-cell depth rather than compacted into a single aggregate. This method of culture may be useful to address donor variability, allowing PHHs to be plated, cultured, and maintain basic functionality at various seeding densities. The TV2D+ system may also increase the robustness of user handling due to loss during manipulation or specialized equipment required to perform extended culture in 3D spheroids.

The TV2D+ system combines standard 2D culture with the longevity and phenotypic stability that typically accompany 3D systems. The protocol described herein provides step-by-step directions for users with basic tissue culture skills in laboratories equipped with standard equipment such as biosafety cabinets, centrifuges, and CO2 incubators. Each step in the process is outlined in detail, including media preparation, thawing, plating, and maintenance of the resulting culture system. The protocol also contains a method for determining basic hepatocyte functionality outputs, albumin, and urea, as well as immunofluorescent image analysis for determining PHH attachment for normalization. When established properly, the PHHs in TV2D+ organize into hepatocyte colonies, mimicking the native hepatic morphology, and maintain extended viability, architectural integrity, and physiologically relevant levels of albumin and urea for at least 2 weeks8. Because the system can allow a range of PHH seeding densities, it may be useful in increasing the availability of less plateable PHH lots that have desirable donor characteristics. This combination of accessibility and functionality makes TV2D+ a suitable hepatic model for a variety of pharmacological and toxicological applications.

<table><tbody><tr><td>0.2 &amp;micro;m PES&amp;nbsp; filter unit&amp;nbsp;</td><td>Thermo Fisher Scientific&amp;nbsp;</td><td>565-0020</td><td>User preference&amp;nbsp;</td></tr><tr><td>15 mL or 50 mL conical tubes</td><td>Thermo Fisher Scientific&amp;nbsp;</td><td>352196 or 352070</td><td>User preference&amp;nbsp;</td></tr><tr><td>Alexa Fluor 555, goat anti-rabbit</td><td>Thermo Fisher Scientific&amp;nbsp;</td><td>A-21428</td><td>Other secondary antibodies can work</td></tr><tr><td>Anti-Cytokeratin 18 antibody&amp;nbsp;</td><td>abcam</td><td>ab24561</td><td>Necessary using same dilution</td></tr><tr><td>AOPI&amp;nbsp;</td><td>Nexcelom&amp;nbsp;</td><td>CS2-0106-5mL</td><td>Used for Cellometer counting&amp;nbsp;</td></tr><tr><td>Biosafety cabinet&amp;nbsp;</td><td>Labconoco</td><td>3460801</td><td>User preference&amp;nbsp;</td></tr><tr><td>Black-walled, clear bottom, 96-well plate&amp;nbsp;</td><td>Thermo Fisher Scientific&amp;nbsp;</td><td>165305</td><td>User preference&amp;nbsp;</td></tr><tr><td>Centrifuge</td><td>Thermo Fisher Scientific&amp;nbsp;</td><td>Sorvall X4R</td><td>Capable of speeds up to 400 x g</td></tr><tr><td>Collagen coated plate, 24-well</td><td>Greiner Bio-One</td><td>662950</td><td>Rat tail collagen coating</td></tr><tr><td>Counting slides</td><td>Nexcelom&amp;nbsp;</td><td>CHT4-SD100-002</td><td>Used for Cellometer counting&amp;nbsp;</td></tr><tr><td>Culture medium&amp;nbsp;</td><td>LifeNet Health&amp;nbsp;</td><td>MED-TCCM</td><td></td></tr><tr><td>Culture supplement&amp;nbsp;</td><td>LifeNet Health&amp;nbsp;</td><td>MED-TCSC</td><td></td></tr><tr><td>DAPI&amp;nbsp;</td><td>Thermo Fisher Scientific&amp;nbsp;</td><td>00-4959-52</td><td>Contains mounting medium</td></tr><tr><td>DPBS (-Ca, -Mg)</td><td>Thermo Fisher Scientific&amp;nbsp;</td><td>14190250</td><td>User preference&amp;nbsp;</td></tr><tr><td>Feeder cell supplement&amp;nbsp;</td><td>LifeNet Health&amp;nbsp;</td><td>MED-TCSA</td><td></td></tr><tr><td>Feeder cell thawing medium</td><td>LifeNet Health&amp;nbsp;</td><td>MED-FCTM</td><td></td></tr><tr><td>Fluorescent microscope&amp;nbsp;</td><td>Zeiss</td><td>AxioObserver Z1</td><td>Equipped with user specific filters&amp;nbsp;</td></tr><tr><td>Hepatocyte thawing medium</td><td>LifeNet Health&amp;nbsp;</td><td>MED-HHTM4C-50ML</td><td></td></tr><tr><td>Human albumin ELISA kit&amp;nbsp;</td><td>abcam</td><td>ab108788</td><td>Necessary if using same dilution</td></tr><tr><td>Human feeder cells</td><td>LifeNet Health&amp;nbsp;</td><td>PHFC24</td><td></td></tr><tr><td>Humidified incubator&amp;nbsp;</td><td>VWR</td><td>97025-842</td><td>Capable of 5% CO&lt;sub&gt;2&amp;nbsp;&lt;/sub&gt;</td></tr><tr><td>IC Fixation buffer</td><td>Thermo Fisher Scientific&amp;nbsp;</td><td>00-8222-49</td><td>Paraformaldehyde based, 10% formalin can also be used</td></tr><tr><td>ImageJ</td><td>National Insitute of Health&amp;nbsp;</td><td>Version 1.52a&amp;nbsp;</td><td>1.52a or higher&amp;nbsp;</td></tr><tr><td>Inverted phase contrast microscope&amp;nbsp;</td><td>Olympus</td><td>CK40-F100</td><td>User preference&amp;nbsp;</td></tr><tr><td>Microcentrifuge tubes</td><td>VWR</td><td>20170-022</td><td>User preference&amp;nbsp;</td></tr><tr><td>Micropipettes (various sizes)</td><td>USA Scientific&amp;nbsp;</td><td>ErgoOne</td><td>User preference&amp;nbsp;</td></tr><tr><td>Permeabilization buffer (10x)</td><td>Thermo Fisher Scientific&amp;nbsp;</td><td>00-8333-56</td><td>Other permeabilization buffers can work</td></tr><tr><td>Plate reader&amp;nbsp;</td><td>BMG Labtech</td><td>CLARIOstar</td><td>Capable of reading absorbance 450-640 nm</td></tr><tr><td>Plating medium&amp;nbsp;</td><td>LifeNet Health&amp;nbsp;</td><td>MED-TCPM</td><td></td></tr><tr><td>Plating supplement&amp;nbsp;</td><td>LifeNet Health&amp;nbsp;</td><td>MED-TCSB</td><td></td></tr><tr><td>Primary human hepatocytes&amp;nbsp;</td><td>LifeNet Health&amp;nbsp;</td><td>various&amp;nbsp;</td><td>Catalog number may vary based on lot number</td></tr><tr><td>Secondary antibody&amp;nbsp;</td><td>Thermo Fisher Scientific&amp;nbsp;</td><td>A-21428</td><td>User preference&amp;nbsp;</td></tr><tr><td>Serological pipet controller</td><td>Gilson&amp;nbsp;</td><td>F110120</td><td>User preference&amp;nbsp;</td></tr><tr><td>Storage bottle 100&amp;ndash;500 mL&amp;nbsp;</td><td>VWR</td><td>76311-770</td><td>User preference&amp;nbsp;</td></tr><tr><td>Urea Nitrogen (BUN) Test&amp;nbsp;</td><td>Stanbio</td><td>0580-250</td><td></td></tr><tr><td>Water bath</td><td>PolyScience</td><td>WBE05</td><td>Capable for use at 37 &amp;deg;C</td></tr></tbody></table>

an all-human hepatic culture system for drug development applications

Finding a long-term, human-relevant culture model for primary human hepatocytes (PHHs) for pharmacological and toxicological studies remains a challenge. Current in vitro model platforms are often inconvenient and complex, lack phenotypic stability over time, and do not support multiple PHH lots, lacking experimental reproducibility and flexibility. Here, we provide a detailed protocol for the thawing, plating, and maintenance of an all-human 2D+ hepatic system (TV2D+), which takes advantage of standard two-dimensional (2D) culture techniques and equipment while maintaining the longevity and phenotypic stability over time that typically accompany more complex three-dimensional (3D) systems. The results show attachment and percent plateability in TV2D+ as a function of PHH seeding density, as well as stable functionality for at least 2 weeks in culture. A range of PHH seeding densities are assessed to achieve a successful long-term culture. When established properly, the PHHs in TV2D+ organize into hepatocyte colonies, express a hepatic-specific marker, and maintain viability, architectural integrity, and physiologically relevant levels of albumin and urea. This unique combination of attributes makes the TV2D+ system a suitable hepatic model for a variety of pharmacological and toxicological applications.

The overall method of plating, culturing, and basic functionality testing of the hepatic culture system involves common primary cell culture techniques and analysis, as illustrated in Figure 1. Hepatocyte attachment and percent plateability were calculated on day 14 using ImageJ analysis of at least five images of Cytokeratin 18 and DAPI staining per well (Figure 2). Representative images of PHHs cultured with feeder cells are shown in Figure 3. The various hepatic seeding densities showed visual differences of confluence based on seeding density and maintained typical hepatic, cuboidal morphology for 14 days of culture. Images of hepatocyte donor lots A and B were captured for each tested seeding density (Figure 4A). The average percent plateability for donor B (89.04% &#177; 3.99%, 198,552 &#177; 49,885 PHHs) was higher than donor A (66.08% &#177; 6.67%, 146,128 &#177; 33,063 PHHs) across all seeding densities used (Figure 4B). Donor A had significantly higher percent plateability using 150,000 PHHs/well (76.07% &#177; 12.87%) compared to 250,000-300,000 PHHs/well (62.75% &#177; 9.64%). Donor B showed no significant differences in hepatocyte percent plateability. Donor B had the lowest hepatocyte plateability (85.78% &#177; 13.25%) at the highest seeding density, 300,000 PHHs/well. Similar to donor A, seeding donor B at 150,000 PHHs/well had the highest percent plateability of hepatocytes (94.75% &#177; 15.07%).
Albumin production and urea synthesis were measured at three time points during the 14-day culture period and normalized to calculated attached hepatocytes. Overall, donor A had increased albumin production compared to donor B (41.32 &#177; 4.58 &#181;g alb/day/106 PHHs vs. 34.66 &#177; 10.03 &#181;g alb/day/106 PHHs) (Figure 5). Donors A and B had the highest albumin production seeding hepatocytes at 150,000 PHHs/well, 45.91 &#177; 5.96 &#181;g alb/day/106 PHHs and 48.67 &#177; 20.44 &#181;g alb/day/106 PHHs, respectively. No significant differences in albumin production were seen in the seeding densities used. As stated by Baudy et al.3, it is desirable that liver microphysiological systems maintain consistent albumin production and urea synthesis with less than 50% change over 14 days of culture. The coefficient of variation (CV) was calculated by dividing the mean by the standard deviation for days 7, 10, and 14. All samples were run in duplicates. The CV for albumin output over the 14-day culture period at 150,000 PHHs/well was 12.24% for donor A and 37.97% for donor B, less than the 50% criterion desired. A high variance in albumin production was seen in both donor A and donor B when seeded at 250,000 and 300,000 PHHs/well. At these seeding densities, both donors experience a steep decrease in albumin production between days 7, 10, and 14 of culture (CV donor A, 22.49%, and donor B, 45.07%).
Donor B urea synthesis (95.09 &#177; 18.91 &#181;g urea/day/106) was increased compared to donor A (64.92 &#177; 4.66 &#181;g urea/day/106 PHHs) when averaging days 7, 10, and 14 PHH lot specific data (Figure 6). Donor B (113.49 &#177; 37.34 &#181;g urea/day/106 PHHs) and donor A (69.12 &#177; 17.06 &#181;g urea/day/106 PHHs) had the greatest urea synthesis over a 14-day culture period seeding at a density of 150,000 PHHs/well and 200,000 PHHs/well, respectively. Both donor lots had the lowest urea output and highest CV at 300,000 PHHs/well. No significant differences in urea synthesis were seen in the seeding densities used. The lowest CV for urea synthesis for donor A was seen when cultured at 250,000 PPHs/well (23.11%) and 200,000 PHHs/well for donor B (28.26%). As highlighted by these results, optimal seeding density for a given lot of PHH depends on the level of confluency desired at the time of the assay and the nature of the outcomes that are being measured; higher seeding density may not always correlate with higher signal or dynamic range.
<img alt="Figure 1" class="xfigimg" src="/files/ftp_upload/65992/65992fig01.jpg" /> 
Figure 1: Flow chart of plating, culturing, and functional testing of hepatocytes with feeder cells. (A) Feeder cells are thawed in a specific thawing medium (see Table of Materials), resuspended in a complete plating medium (see Table of Materials), and the cells are counted. The cells are diluted, plated, and incubated for 60 min at 37 &#176;C/5% CO2. (B) Hepatocytes are thawed in a specific thawing medium (see Table of Materials), resuspended in a complete plating medium, and the cells are counted. The hepatocytes are diluted and plated with feeder cells. The cells are incubated for 2-4 h at 37 &#176;C/5% CO2, shaking in a N-S-E-W motion every 15 min for the first 60 min of culture. The plating medium is replaced with a pre-warmed complete culture medium for maintenance of culture (see Table of Materials). The cultures are fed daily. (C) On days 7, 10, and 14, medium samples are collected for albumin and urea testing. Following collection of samples on day 14, the cells are fixed and stained with Cytokeratin 18 (see Table of Materials) antibody 16-24 h at 4 &#176;C. Further, they are incubated in an appropriate secondary antibody, washed, and mounted with DAPI (see Table of Materials) for capturing and image analysis. <a href="https://www.jove.com/files/ftp_upload/65992/65992fig01large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
<img alt="Figure 2" class="xfigimg" src="/files/ftp_upload/65992/65992fig02.jpg" /> 
Figure 2: Image analysis using ImageJ software. ImageJ processing of captured images. Step 1: a scale is applied to all images based on the microscope-specific scale bar. Step 2: the image type is changed. Step 3: a threshold limit is applied to select DAPI particles. Step 4: a particle analysis is performed, and the count is recorded. Step 5: to determine the number of attached feeder cells, a merged image is counted using the multi-point tool. <a href="https://www.jove.com/files/ftp_upload/65992/65992fig02large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
<img alt="Figure 3" class="xfigimg" src="/files/ftp_upload/65992/65992fig03.jpg" /> 
Figure 3: Morphology of various hepatic seeding densities cultured with feeder cells. Representative images on days 7 and 14 of PHHs cultured with feeder cells (50,000 cells/well) at hepatic seeding densities of 150,000, 200,000, 250,000, and 300,000 PHHs/wells. Images were taken using a 10x objective lens on an inverted phase contrast microscope. Scale bar = 100 &#181;m. <a href="https://www.jove.com/files/ftp_upload/65992/65992fig03large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
<img alt="Figure 4" class="xfigimg" src="/files/ftp_upload/65992/65992fig04.jpg" /> 
Figure 4: Fluorescent Immunocytochemistry of various hepatic seeding densities cultured with feeder cells. (A) Representative images of Cytokeratin 18 (red) staining on day 14 at hepatic seeding densities of 150,000, 200,000, 250,000, and 300,000 PHHs/wells. Two-wells for each seeding density were fixed for 30 min at 4 &#176;C. Wells were incubated 16-24 h at 4&#176; C with primary antibody at 1:1000. A secondary antibody was used at 1:500 for 30 min at 4 &#176;C in dark. DAPI (blue) nuclear stain was added to wells for 15 min at room temperature. Images were taken using a 10X objective lens on an inverted fluorescent microscope. Scale bar = 100 &#181;m. (B) Calculated attached hepatocytes and percent plateability of various hepatic seeding densities calculated using ImageJ. *p &#8804; 0.05, to percent plateability for 200,000, 250,000, and 300,000 PHHs/well. Error bars represent standard deviation (n &#8805; 5 images per condition). <a href="https://www.jove.com/files/ftp_upload/65992/65992fig04large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
<img alt="Figure 5" class="xfigimg" src="/files/ftp_upload/65992/65992fig05.jpg" /> 
Figure 5: Albumin production of hepatocytes cultured with feeder cells. Albumin production from hepatic seeding densities at 150,000, 200,000, 250,000, and 300,000 PHHs/well. Columns represent the 14-day average of micrograms of albumin/day normalized to total attached hepatocytes. A line represents CV between days 7, 10, and 14. Error bars represent standard deviation (n &#8805; 2 wells per condition with replicates). <a href="https://www.jove.com/files/ftp_upload/65992/65992fig05large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
<img alt="Figure 6" class="xfigimg" src="/files/ftp_upload/65992/65992fig06.jpg" /> 
Figure 6: Urea synthesis of hepatocytes cultured with feeder cells. Urea synthesis from hepatic seeding densities at 150,000, 200,000, 250,000, and 300,000 PHHs/well. Columns represent 14-day average of &#181;g urea/day normalized to total attached hepatocytes. A line represents %CV between days 7, 10 and 14. Error bars represent standard deviation (n &#8805; 2 wells per condition with replicates). <a href="https://www.jove.com/files/ftp_upload/65992/65992fig06large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
<table border="1" fo:keep-together.within-page="1" fo:keep-with-next.within-page="always">
	<tbody>
		<tr>
			<td>Standard (S) #</td>
			<td>Concentration (&#181;g/mL)</td>
			<td>Urea Solution&#160; (&#181;L)</td>
			<td>Complete Culture (&#181;L)</td>
		</tr>
		<tr>
			<td>1</td>
			<td>100</td>
			<td>53.3 
			75 mg/dL stock&#160;</td>
			<td>346.7</td>
		</tr>
		<tr>
			<td>2</td>
			<td>50</td>
			<td>100 
			(S1 solution)</td>
			<td>100</td>
		</tr>
		<tr>
			<td>3</td>
			<td>25</td>
			<td>100 
			(S2 solution)</td>
			<td>100</td>
		</tr>
		<tr>
			<td>4</td>
			<td>12.5</td>
			<td>100 
			(S3 solution)</td>
			<td>100</td>
		</tr>
		<tr>
			<td>5</td>
			<td>6.26</td>
			<td>100 
			(S4 solution)</td>
			<td>100</td>
		</tr>
		<tr>
			<td>6</td>
			<td>3.125</td>
			<td>100 
			(S5 Solution)</td>
			<td>100</td>
		</tr>
		<tr>
			<td>7</td>
			<td>1.5625</td>
			<td>100 
			(S6 Solution)</td>
			<td>100</td>
		</tr>
		<tr>
			<td>Blank&#160;</td>
			<td>0</td>
			<td>0</td>
			<td>100</td>
		</tr>
	</tbody>
</table>
Table 1: Urea standard sample preparation. Using 75 mg/dL stock urea, prepare a 100 &#181;g/mL urea solution. Aliquot the suggested volumes to reach the final concentration for the standard curve.

Watch this Scientific Journal Video about Developing a Simple and Robust Hepatic Model for Pharmacological and Toxicological Applications at JoVE.com

Author Spotlight: Developing a Simple and Robust Hepatic Model for Pharmacological and Toxicological Applications 

Recent technical advances enabled the scaled production of an in vitro platform for drug metabolism and toxicity applications. An all-human 2D+ hepatic system (TV2D+) provides physiologically relevant results using traditional two-dimensional culture methods. This protocol will support end-users in the setup, maintenance, and application of the system.

An All-Human Hepatic Culture System for Drug Development Applications

Finding a long-term, human-relevant culture model for primary human hepatocytes (PHHs) for pharmacological and toxicological studies remains a challenge. ...

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Pharmacokinetics and Pharmacodynamics

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Unit 1

Pharmacokinetics: Drug Biotransformation

SCIENTISTS IN ACTION

1.2K Views.  LifeNet Health. Recent technical advances enabled the scaled production of an in vitro platform for drug metabolism and toxicity applications. An all-human 2D+ hepatic system (TV2D+) provides physiologically relevant results using traditional two-dimensional culture methods. This protocol will support end-users in the setup, maintenance, and application of the system.

Video: Author Spotlight: Developing a Simple and Robust Hepatic Model for Pharmacological and Toxicological Applications 

Using Human Induced Pluripotent Stem Cell-derived Hepatocyte-like Cells for Drug Discovery

The ability to differentiate human induced pluripotent stem cells (iPSCs) into hepatocyte-like cells (HLCs) provides new opportunities to study inborn errors in hepatic metabolism. However, to provide a platform that supports the identification of small molecules that can potentially be used to treat liver disease, the procedure requires a culture format that is compatible with screening thousands of compounds. Here, we describe a protocol using completely defined culture conditions, which allow the reproducible differentiation of human iPSCs to hepatocyte-like cells in 96-well tissue culture plates. We also provide an example of using the platform to screen compounds for their ability to lower Apolipoprotein B (APOB) produced from iPSC-derived hepatocytes generated from a familial hypercholesterolemia patient. The availability of a platform that is compatible with drug discovery should allow researchers to identify novel therapeutics for diseases that affect the liver.

The protocol presented here describes a platform for identifying small molecules for the treatment of liver disease. A step-by-step description is presented detailing how to differentiate iPSCs into cells with hepatocyte characteristics in 96-well plates, and to use the cells to screen for small molecules with potential therapeutic activity.

The ability to differentiate human induced pluripotent stem cells (iPSCs) into hepatocyte-like cells (HLCs) provides new opportunities to study inborn ...

Developmental Biology

The Multi-organ Chip - A Microfluidic Platform for Long-term Multi-tissue Coculture

The ever growing amount of new substances released onto the market and the limited predictability of current in vitro test systems has led to a high need for new solutions for substance testing. Many drugs that have been removed from the market due to drug-induced liver injury released their toxic potential only after several doses of chronic testing in humans. However, a controlled microenvironment is pivotal for long-term multiple dosing experiments,&#160;as even minor alterations in extracellular conditions may greatly influence the cell physiology. We focused within our research program on the generation of a microengineered bioreactor, which can be dynamically perfused by an on-chip pump and combines at least two culture spaces for multi-organ applications. This circulatory system mimics the in vivo conditions of primary cell cultures better and assures a steadier,&#160;more quantifiable extracellular relay of signals to the cells. 
For demonstration purposes, human liver equivalents, generated by aggregating differentiated HepaRG cells with human hepatic stellate cells in hanging drop plates, were cocultured with human skin punch biopsies for up to 28 days inside the microbioreactor. The use of cell culture inserts enables the skin to be cultured at an air-liquid interface, allowing topical substance exposure. The microbioreactor system is capable of supporting these cocultures at near physiologic fluid flow and volume-to-liquid ratios, ensuring stable and organotypic culture conditions. The possibility of long-term cultures enables the repeated exposure to substances. Furthermore, a vascularization of the microfluidic channel circuit using human dermal microvascular endothelial cells yields a physiologically more relevant vascular model.

Here, we present a protocol to coculture primary cells, tissue models and punch biopsies in a microfluidic multi-organ chip for up to 28 days. Human dermal microvascular endothelial cells, liver aggregates and skin biopsies were successfully combined in a common media circulation.

The ever growing amount of new substances released onto the market and the limited predictability of current in vitro test systems has led to a high need ...

Bioengineering

An Intestine/Liver Microphysiological System for Drug Pharmacokinetic and Toxicological Assessment

The recently introduced microphysiological systems (MPS) cultivating human organoids are expected to perform better than animals in the preclinical tests phase of drug developing process because they are genetically human and recapitulate the interplay among tissues. In this study, the human intestinal barrier (emulated by a co-culture of Caco-2 and HT-29 cells) and the liver equivalent (emulated by spheroids made of differentiated HepaRG cells and human hepatic stellate cells) were integrated into a two-organ chip (2-OC) microfluidic device to assess some acetaminophen (APAP) pharmacokinetic (PK) and toxicological properties. The MPS had three assemblies: Intestine only 2-OC, Liver only 2-OC, and Intestine/Liver 2-OC with the same media perfusing both organoids. For PK assessments, we dosed the APAP in the media at preset timepoints after administering it either over the intestinal barrier (emulating the oral route) or in the media (emulating the intravenous route), at 12 &#181;M and 2 &#181;M respectively. The media samples were analyzed by reversed-phase high-pressure liquid chromatography (HPLC). Organoids were analyzed for gene expression, for TEER values, for protein expression and activity, and then collected, fixed, and submitted to a set of morphological evaluations. The MTT technique performed well in assessing the organoid viability, but the high content analyses (HCA) were able to detect very early toxic events in response to APAP treatment. We verified that the media flow does not significantly affect the APAP absorption whereas it significantly improves the liver equivalent functionality. The APAP human intestinal absorption and hepatic metabolism could be emulated in the MPS. The association between MPS data and in silico modeling has great potential to improve the predictability of the in vitro methods and provide better accuracy than animal models in pharmacokinetic and toxicological studies.

We exposed a microphysiological system (MPS) with intestine and liver organoids to acetaminophen (APAP). This article describes the methods for organoid production and APAP pharmacokinetic and toxicological property assessments in the MPS. It also describes the tissue functionality analyses necessary to validate the results.

The recently introduced microphysiological systems (MPS) cultivating human organoids are expected to perform better than animals in the preclinical tests ...

Chemistry

Robust Generation of Hepatocyte-like Cells from Human Embryonic Stem Cell Populations

Despite progress in modelling human drug toxicity, many compounds fail during clinical trials due to unpredicted side effects. The cost of clinical studies are substantial, therefore it is essential that more predictive toxicology screens are developed and deployed early on in drug development (Greenhough et al 2010). Human hepatocytes represent the current gold standard model for evaluating drug toxicity, but are a limited resource that exhibit variable function. Therefore, the use of immortalised cell lines and animal tissue models are routinely employed due to their abundance. While both sources are informative, they are limited by poor function, species variability and/or instability in culture (Dalgetty et al 2009). Pluripotent stem cells (PSCs) are an attractive alternative source of human hepatocyte like cells (HLCs) (Medine et al 2010). PSCs are capable of self renewal and differentiation to all somatic cell types found in the adult and thereby represent a potentially inexhaustible source of differentiated cells. We have developed a procedure that is simple, highly efficient, amenable to automation and yields functional human HLCs (Hay et al 2008 ; Fletcher et al 2008 ; Hannoun et al 2010 ; Payne et al 2011 and Hay et al 2011). We believe our technology will lead to the scalable production of HLCs for drug discovery, disease modeling, the construction of extra-corporeal devices and possibly cell based transplantation therapies.

This article will focus on the generation of human hepatic endoderm from human embryonic stem cell populations.

Despite progress in modelling human drug toxicity, many compounds fail during clinical trials due to unpredicted side effects. The cost of clinical ...

"Liver-on-a-Chip" Cultures of Primary Hepatocytes and Kupffer Cells for Hepatitis B Virus Infection

Despite the exceptional infectivity of the hepatitis B virus (HBV) in vivo, where only three viral genomes can result in a chronicity of experimentally infected chimpanzees, most in vitro models require several hundreds to thousands of viral genomes per cell in order to initiate a transient infection. Additionally, static 2D cultures of primary human hepatocytes (PHH) allow only short-term studies due to their rapid dedifferentiation. Here, we describe 3D liver-on-a-chip cultures of PHH, either in monocultures or in cocultures with other nonparenchymal liver-resident cells. These offer a significant improvement to studying long-term HBV infections with physiological host cell responses. In addition to facilitating drug efficacy studies, toxicological analysis, and investigations into pathogenesis, these microfluidic culture systems enable the evaluation of curative therapies for HBV infection aimed at eliminating covalently closed, circular (ccc)DNA. This presented method describes the set-up of PHH monocultures and PHH/Kupffer cell co-cultures, their infection with purified HBV, and the analysis of host responses. This method is particularly applicable to the evaluation of long-term effects of HBV infection, treatment combinations, and pathogenesis.

The goal of this protocol is to provide a step-by-step guide to perform 3-D &#34;liver-on-a-chip&#34; infection experiments with the hepatitis B virus.

Despite the exceptional infectivity of the hepatitis B virus (HBV) in vivo, where only three viral genomes can result in a chronicity of experimentally ...

Immunology and Infection

Advanced 3D Liver Models for In vitro Genotoxicity Testing Following Long-Term Nanomaterial Exposure

Due to the rapid development and implementation of a diverse array of engineered nanomaterials (ENM), exposure to ENM is inevitable and the development of robust, predictive in vitro test systems is essential. Hepatic toxicology is key when considering ENM exposure, as the liver serves a vital role in metabolic homeostasis and detoxification as well as being a major site of ENM accumulation post exposure. Based upon this and the accepted understanding that 2D hepatocyte models do not accurately mimic the complexities of intricate multi-cellular interactions and metabolic activity observed in vivo, there is a greater focus on the development of physiologically relevant 3D liver models tailored for ENM hazard assessment purposes in vitro. In line with the principles of the 3Rs to replace, reduce and refine animal experimentation, a 3D HepG2 cell-line based liver model has been developed, which is a user friendly, cost effective system that can support both extended and repeated ENM exposure regimes (&#8804;14 days). These spheroid models (&#8805;500 &#181;m in diameter) retain their proliferative capacity (i.e., dividing cell models) allowing them to be coupled with the &#8216;gold standard&#8217; micronucleus assay to effectively assess genotoxicity in vitro. Their ability to report on a range of toxicological endpoints (e.g., liver function, (pro-)inflammatory response, cytotoxicity and genotoxicity) has been characterized using several ENMs across both acute (24 h) and long-term (120 h) exposure regimes. This 3D in vitro hepatic model has the capacity to be utilized for evaluating more realistic ENM exposures, thereby providing a future in vitro approach to better support ENM hazard assessment in a routine and easily accessible manner.

This procedure was established to be used for developing advanced 3D hepatic cultures in vitro, which can provide a more physiologically relevant assessment of the genotoxic hazards associated with nanomaterial exposures over both an acute or long-term, repeated dose regimes.

Due to the rapid development and implementation of a diverse array of engineered nanomaterials (ENM), exposure to ENM is inevitable and the development of ...

Human Liver Spheroids from Peripheral Blood for Liver Disease Studies

Human liver cells can form a three-dimensional (3D) structure capable of growing in culture for some weeks, preserving their functional capacity. Due to their nature to cluster in the culture dishes with low or no adhesive characteristics, they form aggregates of multiple liver cells that are called human liver spheroids. The forming of 3D liver spheroids relies on the natural tendency of hepatic cells to aggregate in the absence of an adhesive substrate. These 3D structures possess better physiological responses than cells, which are closer to an in vivo environment. Using 3D hepatocyte cultures has numerous advantages when compared with classical two-dimensional (2D) cultures, including a more biologically relevant microenvironment, architectural morphology that reassembles natural organs as well as a better prediction regarding disease state and in vivo-like responses to drugs. Various sources can be used to generate spheroids, like primary liver tissue or immortalized cell lines. The 3D liver tissue can also be engineered by using human embryonic stem cells (hESCs) or induced pluripotent stem cells (hiPSCs) to derive hepatocytes. We have obtained human liver spheroids using blood-derived pluripotent stem cells (BD-PSCs) generated from unmanipulated peripheral blood by activation of human membrane-bound GPI-linked protein and differentiated to human hepatocytes. The BD-PSCs-derived human liver cells and human liver spheroids were analyzed by light microscopy and immunophenotyping using human hepatocyte markers.

Here we present a non-genetic method to generate human autologous liver spheroids using mononuclear cells isolated from steady-state peripheral blood.

Human liver cells can form a three-dimensional (3D) structure capable of growing in culture for some weeks, preserving their functional capacity. Due to ...

Protocol for Isolation of Primary Human Hepatocytes and Corresponding Major Populations of Non-parenchymal Liver Cells

Beside parenchymal hepatocytes, the liver consists of non-parenchymal cells (NPC) namely Kupffer cells (KC), liver endothelial cells (LEC) and hepatic Stellate cells (HSC). Two-dimensional (2D) culture of primary human hepatocyte (PHH) is still considered as the &#34;gold standard&#34; for in vitro testing of drug metabolism and hepatotoxicity. It is well-known that the 2D monoculture of PHH suffers from dedifferentiation and loss of function. Recently it was shown that hepatic NPC play a central role in liver (patho-) physiology and the maintenance of PHH functions. Current research focuses on the reconstruction of in vivo tissue architecture by 3D- and co-culture models to overcome the limitations of 2D monocultures. Previously we published a method to isolate human liver cells and investigated the suitability of these cells for their use in cell cultures in Experimental Biology and Medicine1. Based on the broad interest in this technique the aim of this article was to provide a more detailed protocol for the liver cell isolation process including a video, which will allow an easy reproduction of this technique.
Human liver cells were isolated from human liver tissue samples of surgical interventions by a two-step EGTA/collagenase P perfusion technique. PHH were separated from the NPC by an initial centrifugation at 50 x g. Density gradient centrifugation steps were used for removal of dead cells. Individual liver cell populations were isolated from the enriched NPC fraction using specific cell properties and cell sorting procedures. Beside the PHH isolation we were able to separate KC, LEC and HSC for further cultivation.
Taken together, the presented protocol allows the isolation of PHH and NPC in high quality and quantity from one donor tissue sample. The access to purified liver cell populations could allow the creation of in vivo like human liver models.

A technique to isolate human hepatocytes and non-parenchymal liver cells from the same donor is described. The different liver cell types build the basis for functional liver models and tissue engineering. This new method aims to isolate liver cells in a high yield and viability.

Beside parenchymal hepatocytes, the liver consists of non-parenchymal cells (NPC) namely Kupffer cells (KC), liver endothelial cells (LEC) and hepatic ...

Establishment and Genetic Manipulation of Murine Hepatocyte Organoids

The liver is the largest organ in mammals. It plays an important role in glucose storage, protein secretion, metabolism and detoxification. As the executor for most of the liver functions, primary hepatocytes have limited proliferating capacity. This requires the establishment of ex vivo hepatocyte expansion models for liver physiological and pathological research. Here, we isolated murine hepatocytes by two steps of collagenase perfusion and established a 3D organoid culture as the 'mini-liver' to recapitulate cell-cell interactions and physical functions. The organoids consist of heterogeneous cell populations including progenitors and mature hepatocytes. We introduce the process in detailed to isolate and culture the murine hepatocytes or fetal hepatocyte to form organoids within 2-3 weeks and show how to passage them by mechanically pipetting up and down. In addition, we will also introduce how to digest the organoids into single cells for lentivirus infection of shRNA/ectopic construction, siRNA transfection and CRISPR-Cas9 engineering. The organoids can be used for drug screens, disease modelling, and basic liver research by modeling liver biology and pathobiology.

A long-term ex vitro 3D organoid culture system was established from mouse hepatocytes. These organoids can be passaged and genetically manipulated by lentivirus infection of shRNA/ectopic construction, siRNA transfection and CRISPR-Cas9 engineering.

The liver is the largest organ in mammals. It plays an important role in glucose storage, protein secretion, metabolism and detoxification. As the ...

Human Liver Microphysiological System for Assessing Drug-Induced Liver Toxicity In Vitro

DILI is a major cause of attrition in drug development with over 1000 FDA-approved drugs known to potentially cause DILI in humans. Unfortunately, DILI is often not detected until drugs have reached clinical stages, risking patients' safety and leading to substantial losses for the pharma industry. Taking into account that standard 2D models have limitations in detecting DILI it is essential to develop in vitro models that are more predictive to improve data translatability. To understand causality and mechanistic aspects of DILI in detail, a human liver MPS consisting of human primary liver parenchymal and non-parenchymal cells (NPCs) and cultured in 3D microtissues on an engineered scaffold under perfusion has been developed. Cryopreserved primary human hepatocytes (PHHs) and Kupffer cells (HKCs) were cocultured as microtissues in the MPS platform for up to two weeks, and each compound of interest was repeatably dosed onto liver microtissues at seven test concentrations for up to four days. Functional liver-specific endpoints were analyzed (including clinical biomarkers such as alanine aminotransferase, ALT) to evaluate liver function. Acute and chronic exposure to compounds of various DILI severities can be assessed by comparing responses to single and multi-dosed microtissues. The methodology has been validated with a broad set of severe and mildly hepatotoxic compounds. Here we show the data for pioglitazone and troglitazone, well-known hepatotoxic compounds withdrawn from the market for causing liver failures. Overall, it has been shown that the liver MPS model can be a useful tool to assess DILI and its association with changes in hepatic function. The model can additionally be used to assess how novel compounds behave in distinct patient subsets and how toxicity profiles may be affected by liver disease states (e.g., viral hepatitis, fatty liver disease).

Human Liver Microphysiological System for Assessing Drug-Induced Liver Toxicity In Vitro

Drug-induced liver injury (DILI) is a major cause of drug failure. A protocol has been developed to accurately predict the DILI liability of a compound using a liver microphysiological system (MPS). The liver model uses the coculture of primary hepatic cells and translationally relevant endpoints to assess cellular responses to treatment.

DILI is a major cause of attrition in drug development with over 1000 FDA-approved drugs known to potentially cause DILI in humans. Unfortunately, DILI is ...

An All-Human Hepatic Culture System for Drug Development Applications

Summary

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Chapters in this video

Using Human Induced Pluripotent Stem Cell-derived Hepatocyte-like Cells for Drug Discovery

The Multi-organ Chip - A Microfluidic Platform for Long-term Multi-tissue Coculture

An Intestine/Liver Microphysiological System for Drug Pharmacokinetic and Toxicological Assessment

Robust Generation of Hepatocyte-like Cells from Human Embryonic Stem Cell Populations

"Liver-on-a-Chip" Cultures of Primary Hepatocytes and Kupffer Cells for Hepatitis B Virus Infection

Advanced 3D Liver Models for In vitro Genotoxicity Testing Following Long-Term Nanomaterial Exposure

Human Liver Spheroids from Peripheral Blood for Liver Disease Studies

Protocol for Isolation of Primary Human Hepatocytes and Corresponding Major Populations of Non-parenchymal Liver Cells

Establishment and Genetic Manipulation of Murine Hepatocyte Organoids

Human Liver Microphysiological System for Assessing Drug-Induced Liver Toxicity In Vitro