JoVE Logo
Faculty Resource Center

Sign In

High-Throughput Transcriptome Analysis for Investigating Host-Pathogen Interactions

DOI :

10.3791/62324-v

March 5th, 2022

March 5th, 2022

3,487 Views

1Laboratory of Pathology of Infectious Diseases, Department of Pathology, Medical School, University of São Paulo, 2Scientific Platform Pasteur USP, 3Department of Clinical and Toxicological Analyses, School of Pharmaceutical Sciences, University of São Paulo, 4Hospital Israelita Albert Einstein

The protocol presented here describes a complete pipeline to analyze RNA-sequencing transcriptome data from raw reads to functional analysis, including quality control and preprocessing steps to advanced statistical analytical approaches.

-- Views

Related Videos

article

Use of an Optical Trap for Study of Host-Pathogen Interactions for Dynamic Live Cell Imaging

article

Use of the EpiAirway Model for Characterizing Long-term Host-pathogen Interactions

article

A Comparative Approach to Characterize the Landscape of Host-Pathogen Protein-Protein Interactions

article

High-throughput Screening for Broad-spectrum Chemical Inhibitors of RNA Viruses

article

High Throughput Co-culture Assays for the Investigation of Microbial Interactions

article

Infection of Zebrafish Larvae with Aspergillus Spores for Analysis of Host-Pathogen Interactions

article

Label-Free Quantitative Proteomics Workflow for Discovery-Driven Host-Pathogen Interactions

article

Double Labeling Immunofluorescence using Antibodies from the Same Species to Study Host-Pathogen Interactions

article

Adjuvant Activity of Mycobacterium paratuberculosis in Enhancing the Immunogenicity of Autoantigens During Experimental Autoimmune Encephalomyelitis

article

Author Spotlight: Expanding the Scope of Multiplex Immunoassays for Lyme Borreliosis Diagnostics and Pathogen Research

JoVE Logo

Privacy

Terms of Use

Policies

Research

Education

ABOUT JoVE

Copyright © 2024 MyJoVE Corporation. All rights reserved