Questo lavoro è stato sostenuto dalla concessione-in-aiuto per giovani scienziati (16K17956) dal Ministero della Pubblica Istruzione, Cultura, Sport, Scienza e Tecnologia del Giappone, Kyoto Tecnoscienza Centro, e la Fondazione Mitani di ricerca e sviluppo.

1. Strumenti <ol><li> dispositivo polarizzazione <ol><li> Per costruire un dispositivo di polarizzazione, fornire una sorgente di luce con una lampada alogena, una guida di luce, polarizzatori, una fase di esempio, una guida ottica, canna, si e una fotocamera digitale reflex (vedere Figura 1C e Materiali Elenco per la polarizzazione parti del dispositivo). </li></ol></li></ol> 2. Preparazione della Soluzione Biopolymer <ol><li> soluzioni polisaccaridi <ol><li> Sciogliere sacran 7 (0,5 g) in acqua pura (100 mL) mediante agitazione a ~ 80 ° C per più di 12 ore. Durante lo scioglimento, coprire il contenitore con pellicola trasparente per evitare l&#39;evaporazione. Preparare una soluzione acquosa di xanthan gum nello stesso modo. </li><li> Raffreddare le soluzioni a ~ 25 ° C per ottenere soluzioni acquose 0,5% in peso. </li><li> Centrifugare la soluzione sacran per rimuovere le impurità (48.400 xg, a 4 ° C, 1 h, 3 Times). </li></ol></li><li> soluzione MT <ol><li> Preparare una soluzione tubulina 0,5% (1 ml) in tampone Britton-Robinson (80 mM piperazine- N, N &#39;-bis (acido 2-etansolfonico) (tubi), 1 mM etilenglicol-bis (β-amminoetil etere) - N, N, N &#39;N&#39; acido -tetraacetic (EGTA), e 5 mM MgCl 2, pH 6,8) su ghiaccio 8. </li><li> Usare la soluzione tubulina 0,5% (50 mL) e guanosina-5&#39; - [(α, β) -methyleno] trifosfato (GpCpp) (5 mL) per preparare una soluzione tubulina GpCpp contenente (50 mL). Incubare a 37 ° C per 3 ore per ottenere un nucleo MT stabile. NOTA: Il ruolo della GpCpp è quello di sostenere la formazione di MT e di sopprimere completamente la depolimerizzazione di MT a tubulina. </li><li> Miscelare la soluzione allo 0,5% in peso tubulina (950 mL) e la soluzione tubulina GpCpp contenente (50 mL) a ~ 25 ° C per 1 giorno per ottenere una soluzione stabile MT 0,5% in peso. </li></ol></li><li> soluzione di DNA<ol><li> Preparare una soluzione di DNA 0,5% (1 ml) in soluzione tampone Tris-EDTA (10 mM Tris, pH 8,0, con 1 mM EDTA). </li></ol></li><li> Mantenere le soluzioni campione biopolimero 0,5% in peso a 25 ° C per l&#39;esperimento di essiccazione. </li></ol> 3. Esperimenti di essiccazione e di osservazione sotto la luce Cross-polarizzata <ol><li> Soluzioni in una cella di un lato aperto (Figura 1A) <ol><li> Tagliare un foglio di silicio (vedi Elenco materiali) in una forma appropriata con uno spessore di 1 mm (dimensione interna di 5-15 mm, 1 mm, e ~ 20 mm; Figura 1A). <ol><li> Montare una cella di un lato aperto composto da un distanziatore di silicio con dimensione interna di 5-15 mm, 1 mm, e ~ 20 mm e due vetrini non modificati (76 mm x 1 mm × 26 mm). Fissare entrambi i lati della cella con doppia clip in anticipo per mantenere la soluzione del campione di fuoriuscire. </li></ol></li><li> Aggiungere lentamente ciascuna della soluzione di biopolimero 0,5% in peso (100-300 mL) utilizzando un ~ 1 mm dimensione dei pori pipettaTE punta a ciascuna cella a ~ 25 ° C. Rimuovere le bolle d&#39;aria dalle cellule utilizzando un ago da siringa. </li><li> Collocare le cellule in un forno con un circolatore aria a 60 ° C sotto pressione atmosferica per evaporazione; direzione evaporazione è opposta a quella di gravità. </li></ol></li><li> Osservazioni sotto luce polarizzata trasversale (Figura 1B-1C) <ol><li> Fornire luce visibile dritto con una lampada alogena da 100 W con una sorgente di luce a superficie piana su una vasta area (80 mm x 80 mm). Regolare i polarizzatori a 45 ° e 135 ° con i supporti (Figura 1C). </li><li> Fissare le posizioni della sorgente luminosa, polarizzatori, fase del campione, e la telecamera utilizzando una guida ottica e stand asta (Figura 1C). Posizionare la fase del campione tra i due polarizzatori (la distanza tra i polarizzatori dovrebbe essere ~ 5 cm). Collocare la fotocamera ~ 20 cm dalla fase di campionamento per consentire di messa a fuoco. </li><li> A orari stabiliti, collocare i campioni dal punto 3.1.3 tra la polarizers sul palco parallelo al piano XZ e coprire il dispositivo con una tenda nera; dispositivo reale è mostrato nella Figura 1C. </li><li> Fotografare i campioni attraverso polarizzatori lineari attraversato utilizzando una fotocamera digitale reflex con un obiettivo zoom standard (vedi Lista dei materiali). Controllare le impostazioni della fotocamera, come la distanza focale, utilizzando il software del computer (vedi Materiali List). </li></ol></li><li> Analisi spazio-temporale del dell&#39;intensità della luce trasmessa (Figura 1C) <ol><li> Per valutare la variazione del parametro d&#39;ordine orientativo nel processo di essiccazione, raccogliere fotografie oraria per 24 h. </li><li> Misurare l&#39;intensità della luce trasmessa lungo la linea centrale nella direzione Z come un valore di grigio con un programma di elaborazione di immagini (ad esempio, ImageJ). </li><li> Tracciare un grafico del valore di grigio in funzione della distanza dal lato superiore aperta. </li></ol></li><li> Osservazioni al microscopio sotto ligh cross-polarizzatat (Figura 1D) <ol><li> Per controllare i metodi, fare osservazioni al microscopio con un microscopio di polarizzazione dotato di una fotocamera CCD 9. Mantenere una piastra ritardo del primo ordine nel percorso ottico. Controllare le condizioni per le foto utilizzando un software per PC. </li></ol></li></ol>

<ol>
	<li>Flemming, H. -. C., Wingender, J. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=The+biofilm+matrix.">The biofilm matrix.</a> Nat. Rev. Microbiology. 8 (9), 623-633 (2010).</li><li>Osada, Y., Kawamura, R., Sano, K. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=.">.</a> Hydrogels of cytoskeletal proteins. , (2016).</li><li>Rothemund, P. W. K. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Folding+DNA+to+create+nanoscale+shapes+and+patterns.">Folding DNA to create nanoscale shapes and patterns.</a> Nature. 440, 297-302 (2006).</li><li>Okeyoshi, K., Okajima, M. K., Kaneko, T. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Milliscale+self-integration+of+megamolecule+biopolymers+on+a+drying+gas-aqueous+liquid+crystalline+interface.">Milliscale self-integration of megamolecule biopolymers on a drying gas-aqueous liquid crystalline interface.</a> Biomacromolecules. 17 (6), 2096-2103 (2016).</li><li>De Gennes, P. G., Prost, J. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=.">.</a> The physics of liquid crystals. , (1993).</li><li>De Gennes, P. G., Brochard-Wyart, F., Quere, D. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=.">.</a> Capillarity and wetting phenomena: drops, bubbles, pearls, waves. , (2003).</li><li>Okajima, M. K., Kaneko, D., Mitsumata, T., Kaneko, T., Watanabe, J. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Cyanobacteria+that+produce+megamolecules+with+efficient+self-orientations.">Cyanobacteria that produce megamolecules with efficient self-orientations.</a> Macromolecules. 42 (8), 3058-3062 (2009).</li><li>Okeyoshi, K., Kawamura, R., Yoshida, R., Osada, Y. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Thermo-+and+photo-enhanced+microtubule+formation+from+Ru(bpy)32+-conjugated+tubulin.">Thermo- and photo-enhanced microtubule formation from Ru(bpy)32+-conjugated tubulin.</a> J. Mater. Chem. B. 2, 41-45 (2014).</li><li>Matsuo, E. S., Tanaka, T. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Kinetics+of+discontinuous+volume-phase+transition+of+gels.">Kinetics of discontinuous volume-phase transition of gels.</a> J. Chem. Phys. 89, 1695-1703 (1988).</li><li>Okajima, K., Mishima, R., Amornwachirabodee, K., Mitsumata, T., Okeyoshi, K., Kaneko, T. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Anisotropic+swelling+in+hydrogels+formed+by+cooperatively+aligned+megamolecules.">Anisotropic swelling in hydrogels formed by cooperatively aligned megamolecules.</a> RSC Adv. 5, 86723-86729 (2015).</li><li>Joshi, G., Okeyoshi, K., Okajima, M. K., Kaneko, T. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Directional+control+of+diffusion+and+swelling+in+megamolecular+polysaccharide+hydrogels.">Directional control of diffusion and swelling in megamolecular polysaccharide hydrogels.</a> Soft Matter. 12, 5515-5518 (2016).</li></ol>

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Talvolta era difficile per la messa a fuoco sul campione per l&#39;intensità della luce trasmessa troppo bassa. In tali casi, ponendo una pellicola di plastica trasparente esteso sul palco aiutato a organizzare la messa a fuoco. La limitazione della risoluzione osservabile dipendeva dalla lente della fotocamera, ~ 10 micron in questo caso. La limitazione osservabile lo spessore del campione, Ay, dipendeva dalla massima intensità luminosa della lampada, ~ 10 mm in questo caso. Il vantaggio ...

Concentrandosi sui rigidi, strutture a forma di asta dei biopolimeri, materiali morbidi dinamiche sono stati utilizzati per varie applicazioni, comprese le matrici polisaccaride biofilm 1, &quot;gel attivi&quot; composta da proteine del citoscheletro 2, e &quot;DNA origami&quot; di forme desiderate 3. Per chiarire le proprietà strutturali, molte strategie sono state esplorate, come la microscopia elettronica a trasmissione, microscopia elettronica a scansione, microscopia a forza atomica e microscopia confocale. Tuttavia, poiché questi metodi sono per lo più svolte in uno stato secco o statico, è difficile da spiegare i comportamenti dinamici in scala macroscopica, come si è visto nei sistemi viventi attuali. Recentemente, abbiamo osservato con successo il comportamento dinamico del biopolimeri sull&#39;interfaccia aria LC acquosa attraverso la luce polarizzata 4. Durante la visualizzazione della struttura orientata durante l&#39;asciugatura biopolimerosoluzione, le variazioni temporali indicati autointegrazione di biopolimeri sull&#39;interfaccia aria LC instabile. Qui, descriviamo un protocollo per l&#39;asciugatura di soluzioni LC biopolimeri all&#39;interfaccia aria-LC con strumenti polarizzati. Al contrario di altre analisi della fase LC che prescindono essiccazione 5, 6, le dinamiche LC durante il processo di essiccazione sono stati esaminati qui valutando il parametro ordine orientazionale nella vista laterale della fase fluida in una cella un lato aperto . La combinazione di evaporazione cellulare e l&#39;utilizzo di strumenti polarizzati abilitate al monitoraggio macroscopico con direzione evaporazione controllata. Inoltre, è stato possibile per convalidare i record asciugatura concentrandosi sulle strutture cristalline dei microdomini adsorbite, che hanno risentito peso molecolare, concentrazione, ecc Per dimostrare l&#39;efficacia del metodo, l&#39;essiccazione processi di biopolimeri base con forme un&#39;asta rigida, quali polisaccaridi, microtubuli (MT), e il DNA, sono stati studiati. Abbiamo scelto questi biopolimeri perché sono tipici esempi di macromolecole gerarchici con pesi megamolecular, e le loro interazioni intermolecolari permettono loro di formare LC stati.

<table border="0" cellpadding="0" cellspacing="0" width="617">
	<tbody>
		<tr height="69">
			<td height="69" style="height:69px;width:172px;">sacran</td>
			<td style="width:151px;">Green Science Materials Inc., Japan</td>
			<td style="width:131px;"></td>
			<td style="width:163px;">From Aphanothece sacrum. 
			Mw = 1.9 &#215; 107 g mol-1</td>
		</tr>
		<tr height="69">
			<td height="69" style="height:69px;width:172px;">xanthan gum</td>
			<td style="width:151px;">Taiyo Kagaku Co., Japan</td>
			<td style="width:131px;">Neosoft XC</td>
			<td style="width:163px;">From Xanthomonas campestris. 
			Mw = 4.7 &#215; 106 g mol-1</td>
		</tr>
		<tr height="43">
			<td height="43" style="height:43px;width:172px;">tubulin</td>
			<td style="width:151px;">Cytoskeleton, Inc., USA</td>
			<td style="width:131px;">T240</td>
			<td style="width:163px;">From porcine brain.</td>
		</tr>
		<tr height="43">
			<td height="43" style="height:43px;width:172px;">GpCpp</td>
			<td style="width:151px;">Jena Bioscience, Germany</td>
			<td style="width:131px;">NU405L</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="43">
			<td height="43" style="height:43px;width:172px;">piperazine-N,N&#8242;-bis(2-ethanesulfonic acid)</td>
			<td style="width:151px;">Sigma-Aldrichi, Co. LLC.</td>
			<td style="width:131px;">P6757-500G</td>
			<td style="width:163px;">PIPES</td>
		</tr>
		<tr height="85">
			<td height="85" style="height:85px;width:172px;">ethylene glycol-bis(&#946;-aminoethyl ether)-N,N,N&#39;,N&#39;-tetraacetic acid</td>
			<td style="width:151px;">Dojindo Molecular Technologies, Inc.</td>
			<td style="width:131px;">342-01314</td>
			<td style="width:163px;">EGTA</td>
		</tr>
		<tr height="43">
			<td height="43" style="height:43px;width:172px;">MgCl2-6H2O</td>
			<td style="width:151px;">Wako Pure Chemical Industries, Ltd.</td>
			<td style="width:131px;">135-15055</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="43">
			<td height="43" style="height:43px;width:172px;">KOH</td>
			<td style="width:151px;">Wako Pure Chemical Industries, Ltd.</td>
			<td style="width:131px;">162-21813</td>
			<td style="width:163px;">pellet</td>
		</tr>
		<tr height="21">
			<td height="58" style="height:58px;width:172px;">DNA</td>
			<td rowspan="2" style="width:151px;">Sigma-Aldrich, Co. LLC.</td>
			<td rowspan="2" style="width:131px;">D1626</td>
			<td rowspan="2" style="width:163px;">From salmon testes. 
			Mw = 1.3 &#215; 106 Da (~2000 bp)</td>
		</tr>
		<tr height="43">
			<td height="43" style="height:43px;width:172px;">Tris-EDTA buffer solution</td>
			<td style="width:151px;">Sigma-Aldrich, Co. LLC.</td>
			<td style="width:131px;">T9285-100ML</td>
			<td style="width:163px;">10 mM Tris, pH 8.0, with 1 mM EDTA</td>
		</tr>
		<tr height="43">
			<td height="43" style="height:43px;width:172px;">slide glass</td>
			<td style="width:151px;">Matsunami Glass Ind., Ltd., Japan</td>
			<td style="width:131px;">S1111</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">silicon rubber sheet</td>
			<td style="width:151px;">Asone Co.</td>
			<td style="width:131px;">6-611-32</td>
			<td style="width:163px;">Thickness: 1 mm</td>
		</tr>
		<tr height="43">
			<td height="43" style="height:43px;width:172px;">centrifuge</td>
			<td style="width:151px;">Beckman-Coulter, Inc., USA</td>
			<td style="width:131px;">Avanti J-25</td>
			<td style="width:163px;">equipped with a JA-20 rotor</td>
		</tr>
		<tr height="43">
			<td height="43" style="height:43px;width:172px;">light source</td>
			<td style="width:151px;">Sumita Optical Glass, Inc., Japan</td>
			<td style="width:131px;">LS-LHA</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="43">
			<td height="43" style="height:43px;width:172px;">light guide</td>
			<td style="width:151px;">Sumita Optical Glass, Inc., Japan</td>
			<td style="width:131px;">GF7.2-1-L1500R-M80 (AAAR-015M)</td>
			<td style="width:163px;">80 mm &#215; 80 mm</td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">halogen lamp</td>
			<td style="width:151px;">Ushio Inc., Japan</td>
			<td style="width:131px;">JCR 15V150WBN</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">polarizer</td>
			<td style="width:151px;">Luceo, Co.,Ltd.</td>
			<td style="width:131px;">POLAX-42S</td>
			<td style="width:163px;">40 x 80 x 2t (45&#730;)</td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">holder</td>
			<td style="width:151px;">Sigmakoki, Co.,Ltd.</td>
			<td style="width:131px;">KMH-80</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">sample stage</td>
			<td style="width:151px;">Sigmakoki, Co.,Ltd.</td>
			<td style="width:131px;">TARW-25503L</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">sample holder</td>
			<td style="width:151px;">Sigmakoki, Co.,Ltd.</td>
			<td style="width:131px;">SHA-25RO</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">rod</td>
			<td style="width:151px;">Sigmakoki, Co.,Ltd.</td>
			<td style="width:131px;">ROU-12-40</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">posts holder</td>
			<td style="width:151px;">Sigmakoki, Co.,Ltd.</td>
			<td style="width:131px;">RS-6-40</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">posts holder</td>
			<td style="width:151px;">Sigmakoki, Co.,Ltd.</td>
			<td style="width:131px;">RS-12-60</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">posts holder</td>
			<td style="width:151px;">Sigmakoki, Co.,Ltd.</td>
			<td style="width:131px;">RS-12-80</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">posts holder</td>
			<td style="width:151px;">Sigmakoki, Co.,Ltd.</td>
			<td style="width:131px;">RS-12-130</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">carrier</td>
			<td style="width:151px;">Sigmakoki, Co.,Ltd.</td>
			<td style="width:131px;">CAA-25LS</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">camera holder</td>
			<td style="width:151px;">Sigmakoki, Co.,Ltd.</td>
			<td style="width:131px;">CMH-2</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">medium optical rail</td>
			<td style="width:151px;">Sigmakoki, Co.,Ltd.</td>
			<td style="width:131px;">OBA-500SH</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">lenstube</td>
			<td style="width:151px;">Tomytech, BORG</td>
			<td style="width:131px;">lenstube BK</td>
			<td style="width:163px;">80&#966;, L25 mm&#160;</td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">lenstube</td>
			<td style="width:151px;">Tomytech, BORG</td>
			<td style="width:131px;">lenstube BK</td>
			<td style="width:163px;">80&#966;, L50 mm&#160;</td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">multiband</td>
			<td style="width:151px;">Tomytech, BORG</td>
			<td style="width:131px;"></td>
			<td style="width:163px;">80&#966;&#160;</td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">V plate</td>
			<td style="width:151px;">Tomytech, BORG</td>
			<td style="width:131px;">V plate 60S</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">plate holder</td>
			<td style="width:151px;">Viexen, Co.,Ltd.</td>
			<td style="width:131px;">plate holder SX</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="43">
			<td height="43" style="height:43px;width:172px;">EOS Kiss X7i&#160;</td>
			<td style="width:151px;">Canon Inc., Japan</td>
			<td style="width:131px;">8594B001</td>
			<td style="width:163px;">with a standard zoom lens,&#160; EFP 18-55 mm</td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">photographic software</td>
			<td style="width:151px;">Canon Inc., Japan</td>
			<td style="width:131px;">EOS Utility</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">PC</td>
			<td style="width:151px;">Microsoft</td>
			<td style="width:131px;">Surface</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">polarization microscope</td>
			<td style="width:151px;">Olympus</td>
			<td style="width:131px;">BX51</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="43">
			<td height="43" style="height:43px;width:172px;">first order retardation plate</td>
			<td style="width:151px;">Olympus</td>
			<td style="width:131px;">U-TP530</td>
			<td style="width:163px;">&#955; = 530 nm</td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">CCD camera</td>
			<td style="width:151px;">Olympus</td>
			<td style="width:131px;">DP80</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;width:172px;">photographic software</td>
			<td style="width:151px;">Olympus</td>
			<td style="width:131px;">cellSens Standard</td>
			<td style="width:163px;"></td>
		</tr>
		<tr height="43">
			<td height="43" style="height:43px;width:172px;">Java-based image processing program</td>
			<td style="width:151px;">the National Institutes of Health</td>
			<td style="width:131px;">ImageJ</td>
			<td style="width:163px;"></td>
		</tr>
	</tbody>
</table>

methods for the self-integration of megamolecular biopolymers on the drying air-lc interface

Gli organismi viventi che utilizzano l&#39;acqua sono sempre inclini a essiccazione nell&#39;ambiente. Le loro attività sono guidati da micro biopolimero a base di e macro-strutture, come si è visto nei casi di acqua in movimento in fasci vascolari e idratante di acqua negli strati cutanei. In questo studio, abbiamo sviluppato un metodo per valutare l&#39;effetto delle soluzioni (LC) liquido acquoso cristallini costituiti da biopolimeri all&#39;essiccamento. Come biopolimeri LC hanno peso megamolecular, abbiamo scelto di studiare polisaccaridi, proteine ​​del citoscheletro, e DNA. L&#39;osservazione delle soluzioni biopolimeri durante essiccamento sotto luce polarizzata rivela milliscale autointegrazione partendo dall&#39;interfaccia aria LC instabile. La dinamica delle soluzioni acquose biopolimeri LC possono essere monitorati facendo evaporare l&#39;acqua da una cellula di un lato aperto. Analizzando le immagini scattate utilizzando luce polarizzata trasversale, è possibile riconoscere le variazioni spazio-temporali nel parametro ordine orientativo. Questometodo può essere utile per la caratterizzazione non solo materiali artificiali in vari campi, ma anche tessuti viventi naturale. Noi crediamo che fornirà un metodo di valutazione per materiali morbidi in campo biomedico e ambientale.

<html> Utilizzo del dispositivo come mostrato in figura 1, l&#39;auto-integrazione da microdomini a macrodomain su un essiccamento all&#39;interfaccia aria-LC è stata valutata (Figura 2A). Come la prima dimostrazione dell&#39;esperimento essiccazione, due tipi di polisaccaridi megamolecular, sacran (M w = 1,9 x 10 7 g mol -1) e gomma xantano (4,7 x 10 6 g mol -1), sono stati confrontati. <st...

Watch this Scientific Journal Video about Methods for the Self-integration of Megamolecular Biopolymers on the Drying Air-LC Interface at JoVE.com

Methods for the Self-integration of Megamolecular Biopolymers on the Drying Air-LC Interface

Procedimento per l&#39;essiccazione indotta autointegrazione di biopolimeri megamolecular sull&#39;interfaccia cristallina aria-liquido viene fornito qui. Questa metodologia sarà utile non solo per comprendere i potenziali macroscopiche di biopolimeri, ma anche come un metodo di valutazione per materiali morbidi in campo biomedico e ambientale.

Metodi per la Self-integrazione di Megamolecular biopolimeri sul asciugatura ad aria-LC Interfaccia

Living organisms that use water are always prone to drying in the environment. Their activities are driven by biopolymer-based micro- and ...

methods-for-self-integration-megamolecular-biopolymers-on-drying-air

Research

JoVE Journal

Bioengineering

6.0K Views.  Japan Advanced Institute of Science and Technology.  Procedimento per l'essiccazione indotta autointegrazione di biopolimeri megamolecular sull'interfaccia cristallina aria-liquido viene fornito qui. Questa metodologia sarà utile non solo per comprendere i potenziali macroscopiche di biopolimeri, ma anche come un metodo di valutazione per materiali morbidi in campo biomedico e ambientale. 

Video: Methods for the Self-integration of Megamolecular Biopolymers on the Drying Air-LC Interface

Bridging the Bio-Electronic Interface with Biofabrication

Advancements in lab-on-a-chip technology promise to revolutionize both research and medicine through lower costs, better sensitivity, portability, and higher throughput. The incorporation of biological components onto biological microelectromechanical systems (bioMEMS) has shown great potential for achieving these goals. Microfabricated electronic chips allow for micrometer-scale features as well as an electrical connection for sensing and actuation. Functional biological components give the system the capacity for specific detection of analytes, enzymatic functions, and whole-cell capabilities. Standard microfabrication processes and bio-analytical techniques have been successfully utilized for decades in the computer and biological industries, respectively. Their combination and interfacing in a lab-on-a-chip environment, however, brings forth new challenges. There is a call for techniques that can build an interface between the electrode and biological component that is mild and is easy to fabricate and pattern.
Biofabrication, described here, is one such approach that has shown great promise for its easy-to-assemble incorporation of biological components with versatility in the on-chip functions that are enabled. Biofabrication uses biological materials and biological mechanisms (self-assembly, enzymatic assembly) for bottom-up hierarchical assembly. While our labs have demonstrated these concepts in many formats 1,2,3, here we demonstrate the assembly process based on electrodeposition followed by multiple applications of signal-based interactions. The assembly process consists of the electrodeposition of biocompatible stimuli-responsive polymer films on electrodes and their subsequent functionalization with biological components such as DNA, enzymes, or live cells 4,5. Electrodeposition takes advantage of the pH gradient created at the surface of a biased electrode from the electrolysis of water 6,7,. Chitosan and alginate are stimuli-responsive biological polymers that can be triggered to self-assemble into hydrogel films in response to imposed electrical signals 8. The thickness of these hydrogels is determined by the extent to which the pH gradient extends from the electrode. This can be modified using varying current densities and deposition times 6,7. This protocol will describe how chitosan films are deposited and functionalized by covalently attaching biological components to the abundant primary amine groups present on the film through either enzymatic or electrochemical methods 9,10. Alginate films and their entrapment of live cells will also be addressed 11. Finally, the utility of biofabrication is demonstrated through examples of signal-based interaction, including chemical-to-electrical, cell-to-cell, and also enzyme-to-cell signal transmission. 
Both the electrodeposition and functionalization can be performed under near-physiological conditions without the need for reagents and thus spare labile biological components from harsh conditions. Additionally, both chitosan and alginate have long been used for biologically-relevant purposes 12,13. Overall, biofabrication, a rapid technique that can be simply performed on a benchtop, can be used for creating micron scale patterns of functional biological components on electrodes and can be used for a variety of lab-on-a-chip applications.

This article describes a biofabrication approach: deposition of stimuli-responsive polysaccharides in the presence of biased electrodes to create biocompatible films which can be functionalized with cells or proteins. We demonstrate a bench-top strategy for the generation of the films as well as their basic uses for creating interactive biofunctionalized surfaces for lab-on-a-chip applications.

Colmare il Bio-Electronic Interface con Biofabrication

Advancements in lab-on-a-chip technology promise to revolutionize both research and medicine through lower costs, better sensitivity, portability, and ...

Ricerca

Bioingegneria

Flexural Rigidity Measurements of Biopolymers Using Gliding Assays

Microtubules are cytoskeletal polymers which play a role in cell division, cell mechanics, and intracellular transport. Each of these functions requires microtubules that are stiff and straight enough to span a significant fraction of the cell diameter. As a result, the microtubule persistence length, a measure of stiffness, has been actively studied for the past two decades1. Nonetheless, open questions remain: short microtubules are 10-50 times less stiff than long microtubules2-4, and even long microtubules have measured persistence lengths which vary by an order of magnitude5-9.
	Here, we present a method to measure microtubule persistence length. The method is based on a kinesin-driven microtubule gliding assay10. By combining sparse fluorescent labeling of individual microtubules with single particle tracking of individual fluorophores attached to the microtubule, the gliding trajectories of single microtubules are tracked with nanometer-level precision. The persistence length of the trajectories is the same as the persistence length of the microtubule under the conditions used11. An automated tracking routine is used to create microtubule trajectories from fluorophores attached to individual microtubules, and the persistence length of this trajectory is calculated using routines written in IDL.
	This technique is rapidly implementable, and capable of measuring the persistence length of 100 microtubules in one day of experimentation. The method can be extended to measure persistence length under a variety of conditions, including persistence length as a function of length along microtubules. Moreover, the analysis routines used can be extended to myosin-based acting gliding assays, to measure the persistence length of actin filaments as well.

A method to measure the persistence length or flexural rigidity of biopolymers is described. The method uses a kinesin-driven microtubule gliding assay to experimentally determine the persistence length of individual microtubules and is adaptable to actin-based gliding assays.

Misure rigidezza flessionale di biopolimeri usando saggi Gliding

Microtubules are cytoskeletal polymers which  play a role in cell division, cell mechanics, and intracellular transport. Each of these functions requires ...

Cell Patterning on Photolithographically Defined 
Parylene-C: SiO2 Substrates

Cell patterning platforms support broad research goals, such as construction of predefined in vitro neuronal networks and the exploration of certain central aspects of cellular physiology. To easily combine cell patterning with Multi-Electrode Arrays (MEAs) and silicon-based &#8216;lab on a chip&#8217; technologies, a microfabrication-compatible protocol is required. We describe a method that utilizes deposition of the polymer parylene-C on SiO2&#160;wafers. Photolithography enables accurate and reliable patterning of parylene-C at micron-level resolution. Subsequent activation by immersion in fetal bovine serum (or another specific activation solution) results in a substrate in which cultured cells adhere to, or are repulsed by, parylene or SiO2 regions respectively. This technique has allowed patterning of a broad range of cell types (including primary murine hippocampal cells, HEK 293 cell line, human neuron-like teratocarcinoma cell line, primary murine cerebellar granule cells, and primary human glioma-derived stem-like cells). Interestingly, however, the platform is not universal; reflecting the importance of cell-specific adhesion molecules. This cell patterning process is cost effective, reliable, and importantly can be incorporated into standard microfabrication (chip manufacturing) protocols, paving the way for integration of microelectronic technology.

Cell Patterning on Photolithographically Defined 
Parylene-C: SiO2 Substrates

This protocol describes a microfabrication-compatible method for cell patterning on SiO2. A predefined parylene-C design is photolithographically printed on SiO2 wafers. Following incubation with serum (or other activation solution) cells adhere specifically to (and grow according to the conformity of) underlying parylene-C, whilst being repulsed by SiO2 regions.

Patterning cellulare su fotolitograficamente Definito parylene-C: SiO<sub&gt; 2</sub&gt; Substrati

Cell patterning platforms support broad research goals, such as construction of predefined in vitro neuronal networks and the exploration of certain ...

Molecular Entanglement and Electrospinnability of Biopolymers

Electrospinning is a fascinating technique to fabricate micro- to nano-scale fibers from a wide variety of materials. For biopolymers, molecular entanglement of the constituent polymers in the spinning dope was found to be an essential prerequisite for successful electrospinning. Rheology is a powerful tool to probe the molecular conformation and interaction of biopolymers. In this report, we demonstrate the protocol for utilizing rheology to evaluate the electrospinnability of two biopolymers, starch and pullulan, from their dimethyl sulfoxide (DMSO)/water dispersions. Well-formed starch and pullulan fibers with average diameters in the submicron to micron range were obtained. Electrospinnability was evaluated by visual and microscopic observation of the fibers formed. By correlating the rheological properties of the dispersions to their electrospinnability, we demonstrate that molecular conformation, molecular entanglement, and shear viscosity all affect electrospinning. Rheology is not only useful in solvent system selection and process optimization, but also in understanding the mechanism of fiber formation on a molecular level.

Electrospinning is a fascinating technique used to fabricate micro- to nano-scale fibers from a wide variety of materials. Molecular entanglement of the constituent polymers in the spinning dope is essential for successful electrospinning. We present a protocol for utilizing rheology to evaluate the electrospinnability of two biopolymers, starch and pullulan.

Molecolare Entanglement e Electrospinnability di biopolimeri

Electrospinning is a fascinating technique to fabricate micro- to nano-scale fibers from a wide variety of materials. For biopolymers, molecular ...

Gene Transfection toward Spheroid Cells on Micropatterned Culture Plates for Genetically-modified Cell Transplantation

To improve the therapeutic effectiveness of cell transplantation, a transplantation system of genetically modified, injectable spheroids was developed. The cell spheroids are prepared in a culture system on micropatterned plates coated with a thermosensitive polymer. A number of spheroids are formed on the plates, corresponding to the cell adhesion areas of 100 &#181;m diameter that are regularly arrayed in a two-dimensional manner, surrounded by non-adhesive areas that are coated by a polyethylene glycol (PEG) matrix. The spheroids can be easily recovered as a liquid suspension by lowering the temperature of the plates, and their structure is well maintained by passing them through injection needles with a sufficiently large caliber (over 27 G). Genetic modification is achieved by gene transfection using the original non-viral gene carrier, polyplex nanomicelle, which is capable of introducing genes into cells without disrupting the spheroid structure. For primary hepatocyte spheroids transfected with a luciferase-expressing gene, the luciferase is sustainably obtained in transplanted animals, along with preserved hepatocyte function, as indicated by albumin expression. This system can be applied to a variety of cell types including mesenchymal stem cells.

This protocol describes a cell transplantation system using genetically modified, injectable spheroids. Cell spheroids are cultured on micropatterned culture plates and recovered after gene introduction using polyplex nanomicelles. This system facilitates prolonged transgene expression from the transplanted cells in host animals while maintaining the innate function of the cells.

Gene Transfection verso Celle sferoide su lastre micropatterned coltura per trapianto di cellule geneticamente modificati

To improve the therapeutic effectiveness of cell transplantation, a transplantation system of genetically modified, injectable spheroids was developed. ...

Methods for Characterizing the Co-development of Biofilm and Habitat Heterogeneity

Biofilms are surface-attached microbial communities that have complex structures and produce significant spatial heterogeneities. Biofilm development is strongly regulated by the surrounding flow and nutritional environment. Biofilm growth also increases the heterogeneity of the local microenvironment by generating complex flow fields and solute transport patterns. To investigate the development of heterogeneity in biofilms and interactions between biofilms and their local micro-habitat, we grew mono-species biofilms of Pseudomonas aeruginosa and dual-species biofilms of P. aeruginosa and Escherichia coli under nutritional gradients in a microfluidic flow cell. We provide detailed protocols for creating nutrient gradients within the flow cell and for growing and visualizing biofilm development under these conditions. We also present protocols for a series of optical methods to quantify spatial patterns in biofilm structure, flow distributions over biofilms, and mass transport around and within biofilm colonies. These methods support comprehensive investigations of the co-development of biofilm and habitat heterogeneity.

Biofilms have complex interactions with their surrounding environment. To comprehensively investigate biofilm-environment interactions, we present here a series of methods to create heterogeneous chemical environment for biofilm development, to quantify local flow velocity, and to analyze mass transport in and around biofilm colonies.

Metodi per caratterizzare il co-sviluppo di biofilm e Habitat Eterogeneità

Biofilms are surface-attached microbial communities that have complex structures and produce significant spatial heterogeneities. Biofilm development is ...

PIP-on-a-chip: A Label-free Study of Protein-phosphoinositide Interactions

Numerous cellular proteins interact with membrane surfaces to affect essential cellular processes. These interactions can be directed towards a specific lipid component within a membrane, as in the case of phosphoinositides (PIPs), to ensure specific subcellular localization and/or activation. PIPs and cellular PIP-binding domains have been studied extensively to better understand their role in cellular physiology. We applied a pH modulation assay on supported lipid bilayers (SLBs) as a tool to study protein-PIP interactions. In these studies, pH sensitive ortho-Sulforhodamine B conjugated phosphatidylethanolamine is used to detect protein-PIP interactions. Upon binding of a protein to a PIP-containing membrane surface, the interfacial potential is modulated (i.e. change in local pH), shifting the protonation state of the probe. A case study of the successful usage of the pH modulation assay is presented by using phospholipase C delta1 Pleckstrin Homology (PLC-&#948;1 PH) domain and phosphatidylinositol 4,5-bisphosphate (PI(4,5)P2) interaction as an example. The apparent dissociation constant (Kd,app) for this interaction was 0.39 &#177; 0.05 &#181;M, similar to Kd,app values obtained by others. As previously observed, the PLC-&#948;1 PH domain is PI(4,5)P2 specific, shows weaker binding towards phosphatidylinositol 4-phosphate, and no binding to pure phosphatidylcholine SLBs. The PIP-on-a-chip assay is advantageous over traditional PIP-binding assays, including but not limited to low sample volume and no ligand/receptor labeling requirements, the ability to test high- and low-affinity membrane interactions with both small and large molecules, and improved signal to noise ratio. Accordingly, the usage of the PIP-on-a-chip approach will facilitate the elucidation of mechanisms of a wide range of membrane interactions. Furthermore, this method could potentially be used in identifying therapeutics that modulate protein&#39;s capacity to interact with membranes.

Here we present a supported lipid bilayer in the context of a microfluidic platform to study protein-phosphoinositide interactions using a label-free method based on pH modulation.

PIP-on-a-chip: Uno studio privo di etichette delle interazioni proteine-fosfoinositide

Numerous cellular proteins interact with membrane surfaces to affect essential cellular processes. These interactions can be directed towards a specific ...

Microhoneycomb Monoliths Prepared by the Unidirectional Freeze-drying of Cellulose Nanofiber Based Sols: Method and Extensions

Monolithic honeycomb structures have been attractive to multidisciplinary fields due to their high strength-to-weight ratio. Particularly, microhoneycomb monoliths (MHMs) with micrometer-scale channels are expected as efficient platforms for reactions and separations because of their large surface areas. Up to now, MHMs have been prepared by a unidirectional freeze-drying (UDF) method only from very limited precursors. Herein, we report a protocol from which a series of MHMs consisting of different components can be obtained. Recently, we found that cellulose nanofibers function as a distinct structure-directing agent towards the formation of MHMs through the UDF process. By mixing the cellulose nanofibers with water soluble substances which do not yield MHMs, a variety of composite MHMs can be prepared. This significantly enriches the chemical constitution of MHMs towards versatile applications.

Here, we present a general protocol to prepare a variety of microhoneycomb monoliths (MHMs) in which fluid can pass through with an extremely low pressure drop. MHMs obtained are expected to be used as filters, catalyst supports, flow-type electrodes, sensors and scaffolds for biomaterials.

Monoliti Microhoneycomb preparati dalla liofilizzazione unidirezionale di cellulosa nanofibra basato Sols: metodo ed estensioni

Monolithic honeycomb structures have been attractive to multidisciplinary fields due to their high strength-to-weight ratio. Particularly, microhoneycomb ...

Fabrication of the Composite Regenerative Peripheral Nerve Interface (C-RPNI) in the Adult Rat

Recent advances in neuroprosthetics have enabled those living with extremity loss to reproduce many functions native to the absent extremity, and this is often accomplished through integration with the peripheral nervous system. Unfortunately, methods currently employed are often associated with significant tissue damage which prevents prolonged use. Additionally, these devices often lack any meaningful degree of sensory feedback as their complex construction dampens any vibrations or other sensations a user may have previously depended on when using more simple prosthetics. The composite regenerative peripheral nerve interface (C-RPNI) was developed as a stable, biologic construct with the ability to amplify efferent motor nerve signals while providing simultaneous afferent sensory feedback. The C-RPNI consists of a segment of free dermal and muscle graft secured around a target mixed sensorimotor nerve, with preferential motor nerve reinnervation of the muscle graft and sensory nerve reinnervation of the dermal graft. In rats, this construct has demonstrated the generation of compound muscle action potentials (CMAPs), amplifying the target nerve&#39;s signal from the micro- to milli-volt level, with signal to noise ratios averaging approximately 30-50. Stimulation of the dermal component of the construct generates compound sensory nerve action potentials (CSNAPs) at the proximal nerve. As such, this construct has promising future utility towards the realization of the ideal, intuitive prosthetic.

Fabrication of the Composite Regenerative Peripheral Nerve Interface C-RPNI in the Adult Rat

The following manuscript describes a novel method for developing a biologic, closed loop neural feedback system termed the composite regenerative peripheral nerve interface (C-RPNI). This construct has the ability to integrate with peripheral nerves to amplify efferent motor signals while simultaneously providing afferent sensory feedback.

Fabbricazione dell'interfaccia nervo periferica rigenerativa composita (C-RPNI) nel ratto adulto

Recent advances in neuroprosthetics have enabled those living with extremity loss to reproduce many functions native to the absent extremity, and this is ...

Silicon Nanowires and Optical Stimulation for Investigations of Intra- and Intercellular Electrical Coupling

Myofibroblasts can spontaneously internalize silicon nanowires (SiNWs), making them an attractive target for bioelectronic applications. These cell-silicon hybrids offer leadless optical modulation capabilities with minimal perturbation to normal cell behavior. The optical capabilities are obtained by the photothermal and photoelectric properties of SiNWs. These hybrids can be harvested using standard tissue culture techniques and then applied to different biological scenarios. We demonstrate here how these hybrids can be used to study the electrical coupling of cardiac cells and compare how myofibroblasts couple to one another or to cardiomyocytes. This process can be accomplished without special equipment beyond a fluorescent microscope with coupled laser line. Also shown is the use of a custom-built MATLAB routine that allows the quantification of calcium propagation within and between the different cells in the culture. Myofibroblasts are shown to have a slower electrical response than that of cardiomyocytes. Moreover, the myofibroblast intercellular propagation shows slightly slower, though comparable velocities to their intracellular velocities, suggesting passive propagation through gap junctions or nanotubes. This technique is highly adaptable and can be easily applied to other cellular arenas, for in vitro as well as in vivo or ex vivo investigations.

This protocol describes the use of silicon nanowires for intracellular optical bio-modulation of cell in a simple and easy to perform method. The technique is highly adaptable to diverse cell types and can be used for in vitro as well as in vivo applications.