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The University of Queensland

25 ARTICLES PUBLISHED IN JoVE

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Medicine

Leprdb Mouse Model of Type 2 Diabetes: Pancreatic Islet Isolation and Live-cell 2-Photon Imaging Of Intact Islets
Oanh H. Do 1, Jiun T. Low 1, Peter Thorn 1
1School of Biomedical Sciences, The University of Queensland

We present here a protocol for the isolation of islets from the mouse model of type 2 diabetes, Leprdb and details of a live-cell assay for measurement of insulin secretion from intact islets that utilizes 2 photon microscopy.

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Medicine

Imaging- and Flow Cytometry-based Analysis of Cell Position and the Cell Cycle in 3D Melanoma Spheroids
Kimberley A. Beaumont 1,2, Andrea Anfosso 1,2, Farzana Ahmed 3, Wolfgang Weninger *1,4,5, Nikolas K. Haass *1,3,5
1The Centenary Institute, 2Sydney Medical School, University of Sydney, 3The University of Queensland Diamantina Institute, Translational Research Institute, The University of Queensland, 4Department of Dermatology, Royal Prince Alfred Hospital, 5Discipline of Dermatology, University of Sydney

We describe two complementary methods using the fluorescence ubiquitination cell cycle indicator (FUCCI) and image analysis or flow cytometry to identify and isolate cells in the inner G1 arrested and outer proliferating regions of 3D spheroids.

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Developmental Biology

Isolation and Expansion of Mesenchymal Stem/Stromal Cells Derived from Human Placenta Tissue
Rebecca A. Pelekanos 1, Varda S. Sardesai 1, Kathryn Futrega 2, William B. Lott 2, Michael Kuhn 2, Michael R. Doran 2,3
1UQ Centre for Clinical Research, The University of Queensland, 2Translational Research Institute, Queensland University of Technology, 3Translational Research Institute, Mater Medical Research - University of Queensland

Herein we describe methods for the dissection of fetal and maternal tissues from human term placenta, followed by isolation and expansion of mesenchymal stem/stromal cells (MSC) from these tissues.

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Bioengineering

Determination of Zeta Potential via Nanoparticle Translocation Velocities through a Tunable Nanopore: Using DNA-modified Particles as an Example
Emma L. C. J. Blundell 1, Robert Vogel 2,3, Mark Platt 1
1Department of Chemistry, School of Science, Loughborough University, 2Izon Science Limited, 3School of Mathematics and Physics, The University of Queensland

Here we use a polyurethane tunable nanopore integrated into a resistive pulse sensing technique to characterize nanoparticles surface chemistry via the measurement of particle translocation velocities, which can be used to determine the zeta potential of individual nanoparticles.

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Biochemistry

Purification of Biotinylated Cell Surface Proteins from Rhipicephalus microplus Epithelial Gut Cells
Thomas P. Karbanowicz 1, Ala Lew-Tabor 1,2, Manuel Rodriguez Valle 1
1Queensland Alliance for Agriculture & Food Innovation, The University of Queensland, 2Centre for Comparative Genomics, Murdoch University

A modified density centrifugation gradient-based methodology was utilized to isolate epithelial cells from Rhipicephalus microplus gut tissue. Surface-bound proteins were biotinylated and purified through streptavidin magnetic beads for utilization in downstream applications.

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Biology

The Murine Choline-Deficient, Ethionine-Supplemented (CDE) Diet Model of Chronic Liver Injury
Jully Gogoi-Tiwari 1, Julia Köhn-Gaone 1, Corey Giles 2, Dirk Schmidt-Arras 3, Francis D. Gratte 1,4, Caryn L. Elsegood 1, Geoffrey W. McCaughan 5,6,7, Grant A. Ramm 8,9, John K. Olynyk 10,11, Janina E.E. Tirnitz-Parker 1,12
1School of Biomedical Sciences & Curtin Health Innovation Research Institute, Curtin University, 2School of Public Health & Curtin Health Innovation Research Institute, Curtin University, 3Institute of Biochemistry, Christian-Albrechts-University, 4School of Veterinary and Life Sciences, Murdoch University, 5Centenary Institute of Cancer Medicine and Cell Biology, The University of Sydney, 6Royal Prince Alfred Hospital, 7A.W. Morrow Gastroenterology and Liver Centre, 8QIMR Berghofer Medical Research Institute, 9Faculty of Medicine and Biomedical Sciences, The University of Queensland, 10Fiona Stanley and Fremantle Hospitals, 11School of Medical and Health Sciences, Edith Cowan University, 12School of Medicine and Pharmacology, University of Western Australia

Here we describe a common method to induce chronic liver injury in mice by feeding of a choline-deficient and ethionine-supplemented (CDE) diet. We demonstrate health monitoring, liver perfusion, isolation, and preservation. A time course of six weeks can inform about liver injury, pathohistology, fibrosis, inflammatory, and liver progenitor cell responses.

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Medicine

Contractility Measurements of Human Uterine Smooth Muscle to Aid Drug Development
Sarah Arrowsmith *1, Peter Keov 2, Markus Muttenthaler 3,4, Christian W. Gruber *2,5
1Harris-Wellbeing Preterm Birth Research Centre, Department of Cellular and Molecular Physiology, Institute of Translational Medicine, University of Liverpool, 2School of Biomedical Sciences, The University of Queensland, 3Faculty of Chemistry, Institute of Biological Chemistry, University of Vienna, 4Institute for Molecular Bioscience, University of Queensland, 5Center for Physiology and Pharmacology, Medical University of Vienna

This article describes experimental protocols to study ex vivo contractions of human myometrium and their application in drug discovery. This technique is used to improve the understanding of myometrial physiology and pathophysiology as well as to validate pharmacological data from novel research probes or drug leads.

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Neuroscience

In Vivo Single-Molecule Tracking at the Drosophila Presynaptic Motor Nerve Terminal
Adekunle T. Bademosi 1, Elsa Lauwers 2, Rumelo Amor 3, Patrik Verstreken 2, Bruno van Swinderen 3, Frédéric A. Meunier 1
1Clem Jones Centre for Ageing Dementia Research, Queensland Brain Institute, The University of Queensland, 2VIB Centre for Brain and Disease Research, KU Leuven Department of Neurosciences, Leuven Institute for Neurodegenerative Disease (LIND), 3Queensland Brain Institute, The University of Queensland

Here we illustrate how single molecule photo-activated localization microscopy can be carried out on the motor nerve terminal of a live Drosophila melanogaster third instar larva.

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Environment

Harvesting Venom Toxins from Assassin Bugs and Other Heteropteran Insects
Andrew Allan Walker 1, Max Rosenthal 1, Eivind E. A. Undheim 2, Glenn F. King 1
1Institute for Molecular Bioscience, The University of Queensland, 2Centre for Advance Imaging, The University of Queensland

Although many insects in the suborder Heteroptera (Insecta: Hemiptera) are venomous, their venom composition and the functions of their venom toxins are mostly unknown. This protocol describes methods to harvest heteropteran venoms for further characterization, using electrostimulation, harassment, and gland dissection.

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Immunology and Infection

Visualization of Bacterial Resistance using Fluorescent Antibiotic Probes
M. Rhia L. Stone 1, Wanida Phetsang 1, Matthew A. Cooper 1, Mark A. T. Blaskovich 1
1Centre for Superbug Solutions, Institute for Molecular Biosciences, The University of Queensland

Fluorescently tagged antibiotics are powerful tools that can be used to study multiple aspects of antimicrobial resistance. This article describes the preparation of fluorescently tagged antibiotics and their application to studying antibiotic resistance in bacteria. Probes can be used to study mechanisms of bacterial resistance (e.g., efflux) by spectrophotometry, flow cytometry, and microscopy.

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Medicine

Murine Precision-Cut Liver Slices as an Ex Vivo Model of Liver Biology
Michael A. Pearen *1, Hong Kiat Lim *1, Francis D. Gratte 2,3, Manuel A. Fernandez-Rojo 1,4,5, Sujeevi K. Nawaratna 6, Geoffrey N. Gobert 7, John K. Olynyk 8,9, Janina E. E. Tirnitz-Parker 2,10, Grant A. Ramm 1,4
1Hepatic Fibrosis Group, QIMR Berghofer Medical Research Institute, 2School of Pharmacy and Biomedical Sciences, Curtin Health Innovation Research Institute, Curtin University, 3School of Veterinary and Life Sciences, Murdoch University, 4School of Medicine, The University of Queensland, 5Madrid Institute for Advanced Studies (IMDEA) in Food, CEI UAM+CSIC, 6School of Medicine, Griffith University, 7School of Biological Sciences, Queen's University Belfast, 8Department of Gastroenterology & Hepatology, Fiona Stanley and Fremantle Hospital Group, 9School of Medical and Health Sciences, Edith Cowan University, 10Centre for Cell Therapy and Regenerative Medicine, School of Biomedical Sciences, University of Western Australia

This protocol provides a simple and reliable method for the production of viable precision-cut liver slices from mice. The ex vivo tissue samples can be maintained under laboratory tissue culture conditions for multiple days, providing a flexible model to examine liver pathobiology.

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Neuroscience

Delivery of Antibodies into the Brain Using Focused Scanning Ultrasound
Gerhard Leinenga 1, Liviu-Gabriel Bodea 1, Wee Kiat Koh 1, Rebecca M. Nisbet 1, Jürgen Götz 1
1Clem Jones Centre for Ageing Dementia Research, Queensland Brain Institute, The University of Queensland

Presented here is a protocol to transiently open the blood-brain barrier (BBB) either focally or throughout a mouse brain to deliver fluorescently-labeled antibodies and activate microglia. Also presented is a method to detect the delivery of antibodies and microglia activation by histology.

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Biology

Collection of Skeletal Muscle Biopsies from the Superior Compartment of Human Musculus Tibialis Anterior for Mechanical Evaluation
Anthony L. Hessel 1,4, Daniel Hahn 1,2, Markus de Marées 3
1Faculty of Sport Science, Human Movement Science, Ruhr University Bochum, 2School of Human Movement and Nutrition Sciences, The University of Queensland, 3Faculty of Sport Science, Sports Medicine and Sports Nutrition, Ruhr University Bochum, 4Institute of Physiology II, University of Muenster

This technical report describes a variation of the modified Bergström technique for the biopsy of the musculus tibialis anterior that limits fiber damage.

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Biology

Live Fluorescence, Inverse Imaging of Cell Ruffling, and Macropinocytosis
Yvette W. H. Koh 1, Yu Hung 1, Neeraj Tuladhar 1, Zhijian Xiao 1, Darren L. Brown 1, Nicholas D. Condon 1, Jennifer L. Stow 1
1Institute for Molecular Bioscience, The University of Queensland

This protocol demonstrates dextran imaging in live cells using continuous uptake and inverse images to optimize visualization of ruffling, macropinosome maturation, and analysis of dextran and other cell labelings.

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Biology

A Non-Degradative Extraction Method for Molecular Structure Characterization of Bacterial Glycogen Particles
Jun-Jiao Wang *1, Meng-Meng Wang *2,3, You-Wei He 4, Zhang-Wen Ma 2,3, Zi-Yi Wang 5,6,7, Rui Qiao 2,3, Xin-Le Tan 5,6, Qing-Hua Liu 8, Liang Wang 1,2
1Department of Bioinformatics, School of Medical Informatics and Engineering, Xuzhou Medical University, 2Jiangsu Key Laboratory of New Drug Research and Clinical Pharmacy, School of Pharmacy, Xuzhou Medical University, 3Department of Pharmaceutical Analysis, School of Pharmacy, Xuzhou Medical University, 4Department of Biological Sciences, School of Life Sciences, Xuzhou Medical University, 5School of Chemistry and Molecular Biosciences, The University of Queensland, 6Centre for Nutrition and Food Sciences, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, 7Joint International Research Laboratory of Agriculture and Agri-Product Safety, College of Agriculture, Yangzhou University, 8State Key Laboratory of Quality Research in Chinese Medicines, Macau University of Science and Technology

Bacterial glycogen structure is greatly impacted by extraction methods which may result in molecular degradation and/or biased sampling. It is essential to develop methods to minimize these problems. Here, four extraction methods have been compared using size distribution and chain length distribution as key criteria for minimizing extraction artifacts.

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Biochemistry

The Extraction of Liver Glycogen Molecules for Glycogen Structure Determination
Ziyi Wang 1,2, Qinghua Liu 3,4, Liang Wang 3,5, Robert G. Gilbert 1,2,6, Mitchell A. Sullivan 7
1School of Chemistry and Molecular Biosciences, The University of Queensland, 2Centre for Nutrition and Food Sciences, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, 3Jiangsu Provincial Key Laboratory of New Drug Research and Clinical Pharmacy, School of Pharmacy, Xuzhou Medical University, 4Department of Pharmaceutical Analysis, School of Pharmacy, Xuzhou Medical University, 5Department of Bioinformatics, School of Medical Informatics and Engineering, Xuzhou Medical University, 6Joint International Research Laboratory of Agriculture and Agri-Product Safety, College of Agriculture, Yangzhou University, 7Glycation and Diabetes Group, Mater Research Institute-The University of Queensland, Translational Research Institute

An optimal sucrose concentration was determined for the extraction of liver glycogen using sucrose density gradient centrifugation. The addition of a 10 min boiling step to inhibit glycogen-degrading enzymes proved beneficial.

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Cancer Research

Live-3D-Cell Immunocytochemistry Assays of Pediatric Diffuse Midline Glioma
Giulia Pericoli *1, Roberta Ferretti *1, Andrew S. Moore 2,3, Maria Vinci 1
1Department of Onco-hematology, Gene and Cell Therapy, Bambino Gesù Children's Hospital, IRCCS, 2Oncology Service, Children's Health Queensland Hospital and Health Service, 3Child Health Research Centre, The University of Queensland

This study presents a protocol of live-3D-cell immunocytochemistry applied to a pediatric diffuse midline glioma cell line, useful to study in real-time the expression of proteins on the plasma membrane during dynamic processes like 3D cell invasion and migration.

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Neuroscience

Robust and Highly Reproducible Generation of Cortical Brain Organoids for Modelling Brain Neuronal Senescence In Vitro
Mohammed R. Shaker *1, Zoe L. Hunter *1, Ernst J. Wolvetang 1
1Australian Institute for Bioengineering and Nanotechnology, The University of Queensland

In this study, we provide a detailed technique for a simple yet robust cortical organoid culture system using standard feeder-free hPSC cultures. This is a rapid, efficient, and reproducible protocol for generating organoids that model aspects of brain senescence in vitro.

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Cancer Research

Rapid Optical Clearing for Semi-High-Throughput Analysis of Tumor Spheroids
Gency Gunasingh 1, Alexander P. Browning 2, Nikolas K. Haass 1
1The University of Queensland Diamantina Institute, The University of Queensland, 2School of Mathematical Sciences, Queensland University of Technology

Tumor spheroids are becoming increasingly utilized to assess tumor cell-microenvironment interactions and therapy response. The present protocol describes a robust but simple method for semi-high-throughput imaging of 3D tumor spheroids using rapid optical clearing.

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Cancer Research

Modeling Brain Metastasis by Internal Carotid Artery Injection of Cancer Cells
Malcolm Lim 1, Nicholas Fletcher 2, Amy McCart Reed 1, Melanie Flint 3, Kristofer Thurecht 2, Jodi Saunus *1,4, Sunil R. Lakhani *1,5
1UQ Centre for Clinical Research, The University of Queensland, 2Centre for Advanced Imaging, Australian Institute for Bioengineering and Nanotechnology and ARC Training Centre for Innovation in Biomedical Imaging Technology, The University of Queensland, 3School of Biomedical Sciences, The University of Queensland, 4Mater Research and Mater Research Institute, The University of Queensland, 5Pathology Queensland, Royal Brisbane Women's Hospital

Brain metastasis is a cause of severe morbidity and mortality in cancer patients. Most brain metastasis mouse models are complicated by systemic metastases confounding analysis of mortality and therapeutic intervention outcomes. Presented here is a protocol for internal carotid injection of cancer cells that produces consistent intracranial tumors with minimal systemic tumors.

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Medicine

Modified Posterior Vertebral Column Resection for Patients with Thoracolumbar Kyphotic Deformity
Xiaoming Tian *1, Yachong Huo *1, Felicity Y. Han 2, Dalong Yang 1, Wenyuan Ding 1, Sidong Yang 1
1Department of Spinal Surgery, The Third Hospital of Hebei Medical University, 2Australian Institute for Bioengineering and Nanotechnology, The University of Queensland

We describe a modified technique for resecting the posterior vertebral column unilaterally based on a modified trephine for patients with thoracolumbar kyphotic deformity.

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Medicine

Application of the O-arm Intraoperative Imaging System to Assist Anterior Cervical Screw Fixation for Odontoid Fractures
Ruoyu Zhao 1, Wenyuan Ding 1,2, Xiangyu Li 1, Felicity Y. Han 3, Dalong Yang 1,2, Sidong Yang 1,2
1Department of Spine Surgery, The Third Hospital of Hebei Medical University, 2Hebei Joint International Research Center for Spinal Diseases, 3Australian Institute for Bioengineering and Nanotechnology, The University of Queensland

This study describes the application of the O-arm intraoperative imaging system in odontoid fractures.

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Medicine

Spinal Shortening Surgery for Lumbosacral Nerve Bowstring Disease: A Surgical Technique
Xiangyu Li 1, Jiaxin Xu 1, Samuel Rudd 2, Zhaohui Li 1, Wenyuan Ding 1, Sidong Yang 1
1Department of Spine Surgery, The Third Hospital of Hebei Medical University, 2School of Chemical Engineering, The University of Queensland

Lumbosacral nerve bowstring disease (LNBD) is a syndrome comprising a series of neurological symptoms caused by high axial tension of the lumbosacral nerve due to congenital, iatrogenic, and other factors. Here, we introduce a surgical technique for the treatment of LNBD through spinal shortening surgery.

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Medicine

Induction of Lumbar Disc Degeneration in Rabbits Through a Transabdominal Approach
Ke Yang 1,2, Joan Li 3, Samuel Rudd 4, Ruoyu Zhao 5, Zhanfeng Song 1,2, Dingding Jia 1,2, Wenyuan Ding 5, Zhanyong Wu 1,2, Sidong Yang 5
1Department of Orthopedic Surgery, Xingtai General Hospital of North China Medical Health Group, 2Orthopaedic Research Institute of Xingtai, 3Medical School, Faculty of Medicine, The University of Queensland, 4School of Chemical Engineering, The University of Queensland, 5Department of Spine Surgery, The Third Hospital of Hebei Medical University

Here, we describe a surgical protocol using needle puncture to establish rabbit lumbar disc degeneration via a transabdominal approach. Radiological checks and histological analyses were used to confirm the successful establishment of lumbar disc degeneration.

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Behavior

The Active Place Avoidance (APA) Test, an Effective, Versatile and Repeatable Spatial Learning Task for Mice
Asad A. Ali 1, Tara L. Walker 2, Daniel G. Blackmore 1,2
1Queensland Brain Institute, The University of Queensland, 2Clem Jones Centre for Ageing Dementia Research, Queensland Brain Institute, The University of Queensland

Here, we present a protocol for the active place avoidance test, a hippocampus-dependent spatial learning paradigm designed for rodents. Altering key parameters allows for re-testing of animals before and after treatments or over time.

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