Name: ptr-tof-ms coupled with an automated sampling system and tailored data analysis for food studies: bioprocess monitoring, screening and nose-space analysis
Uploaded: 2017-05-11T12:30:00
Description: Watch this Scientific Journal Video about PTR-ToF-MS Coupled with an Automated Sampling System and Tailored Data Analysis for Food Studies: Bioprocess Monitoring, Screening and Nose-space Analysis at

This work is supported by the European Commission's 7th Framework Programme under Grant Agreement Number 287382. SY is a beneficiary of a European Commission's 7th Framework Programme Grant Agreement Number 287382. IK is a beneficiary of a FIRST doctoral school grant from the Fondazione Edmund Mach. For his work at University of Foggia, VC is supported by the Apulian Region in the framework of 'Future In Research' program (practice code 9OJ4W81).

The protocol follows the guidelines of our institutional committee on human research ethics.
1. Sample Preparation and Autosampler Conditions
<ol>
	<li>On-line bioprocess monitoring: detecting VOCs released during lactic acid fermentation of yogurt 
	NOTE: This section of the protocol represents part of the procedure reported by Benozzi et al.32
	<ol>
		<li>Add 5 mL of pasteurized milk to each vial (20 mL glass vials equipped with PTFE/silicone septa). Note ...

Proton transfer reaction-mass spectrometry (PTR-MS) coupled to time of flight (ToF) mass analyzers represent a valid compromise between the need for identification and quantification of volatile organic compounds and the necessity for rapid analytical profiling. The high mass resolution that characterizes the ToF mass analyzer gives/provides relevant sensitivity and mass spectra with considerable informational content. Furthermore, the application of PTR-ToF-MS coupled with an auto-sampler and tailored data analysis tool...

Direct-Injection Mass Spectrometric (DIMS) technologies represent a class of analytical instrumental approaches that offer considerable mass and time resolution with high sensitivity and robustness, allowing the quick detection and quantification of volatile organic compounds (VOCs)1. These instrumental approaches include, among others, MS-e-noses, Atmospheric-Pressure Chemical Ionization Mass Spectrometry (APCI-MS), Proton-Transfer-Reaction Mass Spectrometry (PTR-MS), and Selected Ion-Flow-Tube Mass Spectrometry (SIFT-MS)1. The pros and the cons of each approach depend on: the kind of sample injection, the source and control of precursor ions, the control of the ionization process, and the mass analyzer1,2.
Proton-transfer-reaction mass-spectrometry (PTR-MS) was developed more than twenty years ago to monitor in real-time and with low detection limits (usually a few ppbv, part per billion by volume) most volatile organic compounds (VOCs) in air3,4. Current uses of PTR-MS range from medical applications, to food control, to environmental research5,6. The main features of this technique are: the possibility of rapid and continuous measurement, the intense and pure source of precursor ions, and the possibility to control ionization conditions (pressure, temperature and drift voltage). These features permit combining versatile uses with a high degree of standardization1,4. In fact, the method is based on reactions of hydronium ions (H3O+), which induce non-dissociative proton transfer in most volatile compounds (particularly in those characterized by a proton affinity higher than water), protonating neutral compounds (M) according to the reaction: H3O+ + M &#8594; H2O + MH+. In contrast to other techniques, e.g., APCI-MS, precursor ion generation and sample ionization are divided in two different instrumental compartments (a schematic representation of the PTR-MS instrument is given in Figure 1). An electrical discharge by water vapor in the hollow cathode ion source generates a beam of hydronium ions. After this phase, ions cross the drift tube, where the ionization of VOCs takes place7. Ions then enter a pulse extraction section and are accelerated into the TOF section. Through flight times, it is possible to determine the mass-to-charge ratios of the ions8. Each extraction pulse leads to a complete mass spectrum8 of the selected m/z range. Ion spectra are recorded by a fast data acquisition system7. A complete spectrum is typically acquired in one second although higher time resolution can be achieved according to the signal to noise level and a quantitative estimation of the VOC headspace concentration can be provided even without calibration9,10.
<img alt="Figure 1" src="/files/ftp_upload/54075/54075fig1.jpg" /> 
Figure 1: Schematic illustration of a PTR-MS. Schematic representation of the PTR-MS instrument. HC: external ion source with hollow cathode; SD: source drift; VI, venturi-type inlet; EM, electron multiplier; FC1-2, flow controllers. Reprinted with permission from Boschetti et al.7. <a href="http://cloudflare.jove.com/files/ftp_upload/54075/54075fig1large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
In general, the PTR technique assures fast analysis time, high detection sensitivity and a relatively compact instrument size, requires neither sample preparation nor sample destruction and thus allows real time investigations11. PTR is of considerable interest in the environmental, atmospheric, food, technological, medical and biological sciences12.
VOCs associated with food matrices are of outstanding interest in food science and technology because of their important role in the molecular basis of biological phenomena linked to odor and flavor perception and, thus, in food acceptance. Hence, our interest in real time and non-invasive detection of VOCs mainly deals with sensory qualities of food. In addition, if we consider the possibility to detect spoilage and pathogenic microorganisms by means of released VOCs13 and/or to monitor volatile organic compounds as markers following technological processes (e.g. Maillard by-products during thermal treatments)14, it becomes clear how VOC identification and quantification are fields of interest in food quality management6. Several recent uses of PTR-MS technologies for the rapid monitoring and quantification of VOCs in food matrices testify to the wide range of application of these analytical approaches (Table 1).
<table border="1" fo:keep-together.within-page="1" fo:keep-with-next.within-page="always">
	<tbody>
		<tr>
			<td>Food matrix</td>
			<td>Kind of application</td>
			<td>Brief description</td>
			<td>Reference</td>
		</tr>
		<tr>
			<td>Butter</td>
			<td>Screening/characterization</td>
			<td>Geographical origin of European butters</td>
			<td>15</td>
		</tr>
		<tr>
			<td>Yogurt</td>
			<td>Bioprocess monitoring</td>
			<td>Evolution during lactic acid fermentation</td>
			<td>16</td>
		</tr>
		<tr>
			<td>Cereal bars</td>
			<td>In vivo measurement</td>
			<td>Nosespace during consumption of cereal bars with varying sugar composition</td>
			<td>17</td>
		</tr>
		<tr>
			<td>Liquid model systems</td>
			<td>Simulated oral conditions</td>
			<td>Evaluation of tongue pressure and oral conditions in a model mouth</td>
			<td>18</td>
		</tr>
		<tr>
			<td>Apple</td>
			<td>In vivo measurement</td>
			<td>Nosespace during consumption apple with different genetic, textural, and physicochemical parameters</td>
			<td>19</td>
		</tr>
		<tr>
			<td>Coffee</td>
			<td>Screening/characterization</td>
			<td>Differentiation of specialty coffees</td>
			<td>20</td>
		</tr>
		<tr>
			<td>Grape must</td>
			<td>Screening/characterization</td>
			<td>Effect of cooking process</td>
			<td>21</td>
		</tr>
		<tr>
			<td>Flavored candies&#160;</td>
			<td>In vivo measurement</td>
			<td>Determination on panelists using different direct mass spectrometry methods</td>
			<td>22</td>
		</tr>
		<tr>
			<td>Ham&#160;</td>
			<td>Screening/characterization</td>
			<td>Effect of the pig rearing system</td>
			<td>23</td>
		</tr>
		<tr>
			<td>Bread</td>
			<td>Simulated oral conditions</td>
			<td>Simulating bread aroma during mastication</td>
			<td>24</td>
		</tr>
		<tr>
			<td>Milk</td>
			<td>Screening/characterization</td>
			<td>Monitoring photooxidation-induced dynamic changes in milk</td>
			<td>25</td>
		</tr>
		<tr>
			<td>Coffee</td>
			<td>Screening/characterization</td>
			<td>Diversity in roasted coffees from different geographic origins</td>
			<td>26</td>
		</tr>
		<tr>
			<td>Bread</td>
			<td>Bioprocess monitoring</td>
			<td>Effect of different yeast starters during alcoholic fermentation</td>
			<td>27</td>
		</tr>
		<tr>
			<td>Coffee</td>
			<td>In vivo measurement</td>
			<td>Nosespace during consumption of different roasted coffee preparations</td>
			<td>28</td>
		</tr>
		<tr>
			<td>Tomatoes</td>
			<td>Screening/characterization</td>
			<td>Impact of Production Location, Production System, and Variety&#160;</td>
			<td>29</td>
		</tr>
		<tr>
			<td>Bread</td>
			<td>Bioprocess monitoring</td>
			<td>Effect of flour, yeast and their interaction during alcoholic fermentation</td>
			<td>30</td>
		</tr>
		<tr>
			<td>Mushrooms&#160;</td>
			<td>Screening/characterization</td>
			<td>Shelf life of dried porcini mushrooms&#160;</td>
			<td>31</td>
		</tr>
		<tr>
			<td>Yogurt</td>
			<td>Bioprocess monitoring</td>
			<td>Effect of different starter cultures during lactic fermentation</td>
			<td>32</td>
		</tr>
		<tr>
			<td>Apple</td>
			<td>Screening/characterization</td>
			<td>Diversity in an apple germplasm collection</td>
			<td>33</td>
		</tr>
		<tr>
			<td>Coffee</td>
			<td>Screening/characterization</td>
			<td>Tracing coffee origin&#160;</td>
			<td>34</td>
		</tr>
		<tr>
			<td>Coffee</td>
			<td>In vivo measurement</td>
			<td>Combination of a dynamic sensory method and in-vivo nosespace analysis to understand coffee perception</td>
			<td>35</td>
		</tr>
	</tbody>
</table>
Table 1: List of scientific studies using PTR-ToF-MS in the food sector. Non-exhaustive list of scientific studies using PTR-based approaches to monitor VOC content in food-related experiments.
In recent studies, we reported on the application of PTR-ToF-MS coupled with an automated sampling system and tailored data analysis tools to increase sampling automation and reliability and, consequently, to enhance the potential of this technique7,10,13. This allowed us to screen, in terms of VOC content, large sample sets (e.g. food of different origins with many replicates, entire germoplasms), to analyze the influence of several experimental modes on VOC release (e.g. different concentrations of a given ingredient, diverse intensities of a specific technological parameter), and to monitor VOCs associated with a given bioprocess (e.g. enzymatic oxidation, alcoholic fermentation). Here, in order to exemplify the potential of PTR-ToF-MS in the agri-food sector, we present three paradigmatic applications: the detection of VOCs released during lactic acid fermentation of yogurt induced by different microbial starter cultures (on-line bioprocess monitoring), the monitoring of VOCs associated with different apple cultivars (large-scale screening) and the in vivo study of retronasal VOC release while drinking coffee (nosespace analysis).

<table border="1" fo:keep-together.within-page="1" fo:keep-with-next.within-page="always">
	<tbody>
		<tr>
			<td>PTR-TOF 8000 High-Resolution PTR-TOF-MS</td>
			<td>Ionicon Analytik Ges.m.b.H.</td>
			<td>PTR-TOF 8000</td>
			<td>An detector for volatile organic compounds (VOCs) that allows for continuous VOC quantification with a very high mass resolution</td>
		</tr>
		<tr>
			<td>GERSTEL&#160;MPS 2XL</td>
			<td>Gerstel</td>
			<td></td>
			<td>A multifunctional autosampler&#160;</td>
		</tr>
		<tr>
			<td>Gas Calibration Unit</td>
			<td>Ionicon Analytik Ges.m.b.H.</td>
			<td>GCU-s / GCU-a</td>
			<td>A dynamic gas dilution system that provides variable but known quantities of different standard compounds in a carrier gas stream</td>
		</tr>
		<tr>
			<td>TofDaq</td>
			<td>Tofwerk AG</td>
			<td>free available at http://soft.tofwerk.com/&#160;&#160;&#160;</td>
			<td>A data acquisition software&#160;(for spectra&#160; acquisition)</td>
		</tr>
		<tr>
			<td>MATLAB&#160;</td>
			<td>MathWorks</td>
			<td>http://it.mathworks.com/products/matlab/</td>
			<td>A technical computing language and interactive environment for algorithm development, data visualization, and data analysis</td>
		</tr>
		<tr>
			<td>R</td>
			<td>The R Foundation</td>
			<td>free available at https://cran.r-project.org/mirrors.html&#160;&#160;</td>
			<td>A language and environment for statistical computing and graphics</td>
		</tr>
	</tbody>
</table>

ptr-tof-ms coupled with an automated sampling system and tailored data analysis for food studies: bioprocess monitoring, screening and nose-space analysis

Proton Transfer Reaction (PTR), combined with a Time-of-Flight (ToF) Mass Spectrometer (MS) is an analytical approach based on chemical ionization that belongs to the Direct-Injection Mass Spectrometric (DIMS) technologies. These techniques allow the rapid determination of volatile organic compounds (VOCs), assuring high sensitivity and accuracy. In general, PTR-MS requires neither sample preparation nor sample destruction, allowing real time and non-invasive analysis of samples. PTR-MS are exploited in many fields, from environmental and atmospheric chemistry to medical and biological sciences. More recently, we developed a methodology based on coupling PTR-ToF-MS with an automated sampler and tailored data analysis tools, to increase the degree of automation and, consequently, to enhance the potential of the technique. This approach allowed us to monitor bioprocesses (e.g. enzymatic oxidation, alcoholic fermentation), to screen large sample sets (e.g. different origins, entire germoplasms) and to analyze several experimental modes (e.g. different concentrations of a given ingredient, different intensities of a specific technological parameter) in terms of VOC content. Here, we report the experimental protocols exemplifying different possible applications of our methodology: i.e. the detection of VOCs released during lactic acid fermentation of yogurt (on-line bioprocess monitoring), the monitoring of VOCs associated with different apple cultivars (large-scale screening), and the in vivo study of retronasal VOC release during coffee drinking (nosespace analysis).

The volatile profile of samples resulted in a complete mass spectrum for the desired mass range acquired each second. In Figure 2, an example of the acquired average spectra during the yogurt on-line bioprocess is given32. In every spectrum, more than 300 mass peaks in the m/z range up to 250 Th can be identified32.
<img alt="Figure 2" src="/files/ftp_upload/54075/...

Watch this Scientific Journal Video about PTR-ToF-MS Coupled with an Automated Sampling System and Tailored Data Analysis for Food Studies: Bioprocess Monitoring, Screening and Nose-space Analysis at 

PTR-ToF-MS Coupled with an Automated Sampling System and Tailored Data Analysis for Food Studies: Bioprocess Monitoring, Screening and Nose-space Analysis

Proton Transfer Reaction Time of Flight Mass Spectrometry allows high-sensitivity, rapid and non-invasive analysis of volatile organic compounds. To demonstrate its potential, we give three examples: lactic acid fermentation of yogurt (on-line bioprocess monitoring), different apple genotypes (large-scale screening), and retronasal space after drinking coffee (nosespace analysis).

Proton Transfer Reaction (PTR), combined with a Time-of-Flight (ToF) Mass Spectrometer (MS) is an analytical approach based on chemical ionization that ...

Research

JoVE Journal

Chemistry

Preparation of Mica and Silicon Substrates for DNA Origami Analysis and Experimentation

The designed nature and controlled, one-pot synthesis of DNA origami provides exciting opportunities in many fields, particularly nanoelectronics. Many of ...

Real-time Breath Analysis by Using Secondary Nanoelectrospray Ionization Coupled to High Resolution Mass Spectrometry

Exhaled volatile organic compounds (VOCs) have aroused considerable interest, since they can serve as biomarkers for disease diagnosis and environmental ...

Natural Product Discovery with LC-MS/MS Diagnostic Fragmentation Filtering: Application for Microcystin Analysis

Natural products are often biosynthesized as mixtures of structurally similar compounds, rather than a single compound. Due to their common structural ...

Integrated Cell Manipulation Platform Coupled with the Single-probe for Mass Spectrometry Analysis of Drugs and Metabolites in Single Suspension Cells

Single cell mass spectrometry (SCMS) enables sensitive detection and accurate analysis of broad ranges of cellular species on the individual-cell level. ...

Directed Assembly of Elastin-like Proteins into defined Supramolecular Structures and Cargo Encapsulation In Vitro

Tailored proteinaceous building blocks are versatile candidates for the assembly of supramolecular structures such as minimal cells, drug delivery ...

Synthesis of Aptamer-PEI-g-PEG Modified Gold Nanoparticles Loaded with Doxorubicin for Targeted Drug Delivery

Due to drug resistance and toxicity in healthy cells, use of doxorubicin (DOX) has been limited in clinical cancer therapy. This protocol describes the ...

Nanoparticle Tracking Analysis of Gold Nanoparticles in Aqueous Media through an Inter-Laboratory Comparison

In the field of nanotechnology, analytical characterization plays a vital role in understanding the behavior and toxicity of nanomaterials (NMs). ...

Preparation of Nanoparticles for ToF-SIMS and XPS Analysis

Nanoparticles have gained increasing attention in recent years due to their potential and application in different fields including medicine, cosmetics, ...

ARL Spectral Fitting as an Application to Augment Spectral Data via Franck-Condon Lineshape Analysis and Color Analysis

The ARL Spectral Fitting application provides a free, publicly accessible, and fully transparent method for performing Franck-Condon Lineshape Analysis ...

Capillary Electrophoresis-based Hydrogen/Deuterium Exchange for Conformational Characterization of Proteins with Top-down Mass Spectrometry

Resolving conformational heterogeneity of multiple protein states that coexist in solution remains one of the main obstacles in the characterization of ...