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JUMPn: A Streamlined Application for Protein Co-Expression Clustering and Network Analysis in Proteomics

DOI :

10.3791/62796-v

October 19th, 2021

October 19th, 2021

2,739 Views

1Departments of Structural Biology and Developmental Neurobiology, St. Jude Children’s Research Hospital, 2Center for Proteomics and Metabolomics, St. Jude Children’s Research Hospital, 3Department of Computational Biology, St. Jude Children’s Research Hospital

We present a systems biology tool JUMPn to perform and visualize network analysis for quantitative proteomics data, with a detailed protocol including data pre-processing, co-expression clustering, pathway enrichment, and protein-protein interaction network analysis.

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Keywords Protein Co expression

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