Segmentation and Linear Measurement for Body Composition Analysis using Slice-O-Matic and Horos

10.4K Views

•

13:35 min

•

March 21st, 2021

DOI :

10.3791/61674-v

March 21st, 2021

•

Sean Steele¹, Fangyi Lin¹, Thien-Linh Le¹, Alexandra Medline¹, Michelle Higgins¹, Alex Sandberg¹, Sean Evans¹, Gordon Hong², Milton A. Williams³, Mehmet A. Bilen⁴, Sarah Psutka⁵, Kenneth Ogan¹, Viraj A. Master¹

¹Department of Urology, Emory University School of Medicine, ²Northeast Ohio Medical University, ³Department of Urology, University of Alabama at Birmingham, ⁴Department of Medical Oncology, Winship Cancer Institute of Emory University, ⁵Department of Urology, University of Washington

Summary

Explore More Videos

Body Composition Analysis

Muscle Degeneration

Cancer Survival

Third Lumbar Region

Measurement Protocols

L3 Vertebrae Protocol

Chapters in this video

0:00

Introduction

0:42

Preprocessing: Obtaining L3 Image

2:23

Tissue Segmentation

7:55

MRI Segmentation

10:08

Linear Measurement

11:46

Linear Measurements with Box Method

12:24

Representative Results

Related Videos

article

Vascular Occlusion Training for Inclusion Body Myositis: A Novel Therapeutic Approach

14.1K Views

article

Segmentation and Measurement of Fat Volumes in Murine Obesity Models Using X-ray Computed Tomography

16.1K Views

article

Outer-Boundary Assisted Segmentation and Quantification of Trabecular Bones by an Imagej Plugin

9.3K Views

article

Introducing an Angle Adjustable Cutting Box for Analyzing Slice Shear Force in Meat

12.9K Views

article

Multimodal Study of Murine Cardiovascular Remodeling: Four-Dimensional Ultrasound and Mass Spectrometry Imaging

672 Views

article

Volume Segmentation and Analysis of Biological Materials Using SuRVoS (Super-region Volume Segmentation) Workbench

9.8K Views

article

Clinical Anthropometrics and Body Composition from 3-Dimensional Optical Imaging

1.1K Views

article

Three-dimensional Characterization of Interorganelle Contact Sites in Hepatocytes using Serial Section Electron Microscopy

5.5K Views

article

Non-invasive Skeletal Muscle Quantification in Small Animals Using Micro-computed Tomography

333 Views

article

Measurement of Oxygen Consumption Rate in Acute Mouse Brain Slices

47 Views

Copyright © 2025 MyJoVE Corporation. All rights reserved