Fluorescence-Based Quantification of Mitochondrial Membrane Potential and Superoxide Levels Using Live Imaging in HeLa Cells

Summary

This technique describes an effective workflow to visualize and quantitatively measure mitochondrial membrane potential and superoxide levels within HeLa cells using fluorescence-based live imaging.

Abstract

Mitochondria are dynamic organelles critical for metabolic homeostasis by controlling energy production via ATP synthesis. To support cellular metabolism, various mitochondrial quality control mechanisms cooperate to maintain a healthy mitochondrial network. One such pathway is mitophagy, where PTEN-induced kinase 1 (PINK1) and Parkin phospho-ubiquitination of damaged mitochondria facilitate autophagosome sequestration and subsequent removal from the cell via lysosome fusion. Mitophagy is important for cellular homeostasis, and mutations in Parkin are linked to Parkinson's disease (PD). Due to these findings, there has been a significant emphasis on investigating mitochondrial damage and turnover to understand the molecular mechanisms and dynamics of mitochondrial quality control. Here, live-cell imaging was used to visualize the mitochondrial network of HeLa cells, to quantify the mitochondrial membrane potential and superoxide levels following treatment with carbonyl cyanide m-chlorophenyl hydrazone (CCCP), a mitochondrial uncoupling agent. In addition, a PD-linked mutation of Parkin (Parkin^T240R) that inhibits Parkin-dependent mitophagy was expressed to determine how mutant expression impacts the mitochondrial network compared to cells expressing wild-type Parkin. The protocol outlined here describes a simple workflow using fluorescence-based approaches to quantify mitochondrial membrane potential and superoxide levels effectively.

Introduction

The mitochondrial network is a series of interconnected organelles that play a crucial role in energy production¹, innate immunity^2,3, and cell signalling^4,5. Mitochondrial dysregulation has been associated with neurodegenerative diseases such as Parkinson's disease (PD)^6,7. PD is a progressive neurodegenerative disorder affecting dopaminergic neurons of the substantia nigra that impacts nearly 10 million people worldwide⁸. PD has bee....

Protocol

1. Preparation of biological samples

NOTE: Perform the following steps using sterile technique in a biosafety cabinet. Spray the surface of the cabinet and all materials with 70% ethanol.

1. HeLa cell culturing and transfection
   1. Culture 30,000 HeLa cells in Dulbecco's modified eagle medium (DMEM) containing 4.5 g/L glucose supplemented with 10% fetal bovine serum and 1% L-glutamine solution (HeLa media; see Table of Materials). Plate th.......

Discussion

The workflow outlined here can be used to quantify mitochondrial membrane potential and superoxide levels robustly and reproducibly using fluorescence-based imaging³⁰. There are important technical limitations to consider when designing these experiments. HeLa cells were transfected with an empty YFP vector, YFP-Parkin^WT, or YFP-Parkin^T240R. The empty YFP vector was used as a control to confirm that the experimental findings were specific to Parkin. For the transient transfec.......

Materials

Name	Company	Catalog Number	Comments
Chemicals, Peptides, and Recombinant Proteins
CCCP (carbonyl cyanide m-chlorophenyl hydrazone)	Sigma-Aldrich	C2759
DMEM (1x) with 4.5 g/L glucose	Gibco	11-965-084
DMSO, Anhydrous	ThermoFisher Scientific	D12345
Fetal Bovine Serum	Hyclone	SH3007103
FuGENE 6 (Tranfection Reagent)	Promega	E2691
GlutaMAX 100x (L-Glutamine Solution)	Gibco	35-050-061
Hoescht 33342	ThermoFisher Scientific	62249
MitoSOX  Red	ThermoFisher Scientific	M36008
MitoTracker Deep Red	ThermoFisher Scientific	M7514
Opti-MEM (Redued Serum media)	ThermoFisher scientific	31985070
Tetramethylrhodamine, Ethyl Ester, Perchlorate (TMRE)	ThermoFisher Scientific	T669
Experimental models: Organisms/Strains
HeLa-M (Homo sapiens)	A. Peden (Cambridge Institute for Medical Research)	N/A
Recombinant DNA
EYFP Empty Vector	N/A	N/A
YFP-Parkin T240R	This Paper	Generated by site-directed mutagenesis from YFP-Parkin
YFP-Parkin WT	Addgene; PMID:19029340	RRID:Addgene_23955
Software and Algorithms
Adobe Illustrator	Adobe Inc.	https://www.adobe.com/products/illustrator	(Schindelin, 2012)
Excel (Spreadsheet Software)	Microsoft Office	https://www.microsoft.com/en-us/microsoft-365/excel
ImageJ		https://imagej.net/software/fiji/
Leica Application Suite (LAS X)	Leica	https://www.leica-microsystems.com/products/microscope-software/p/leica-las-x-ls/
Microsoft Excel	Microsoft Office	https://www.microsoft.com/excel
Prism9 (Statistical Analysis Software)	GraphPad Software	https://www.graphpad.com
Other
35 mm Dish, No. 1.5 Coverslip, 20 mm Glass Diameter, Uncoated	MatTek	P35G-1.5-20-C
Cage Incubator (Environmental Chamber)	Okolab	https://www.oko-lab.com/cage-incubator
DMiL Inverted Microscope	Leica	N/A
LIGHTNING Deconvolution Software	Leica	N/A
STELLARIS 8 confocal microscope	Leica	N/A