A calcium imaging approach enables the recording of taste-induced responses in the brains of awake flies while a solution is applied to the labellum. Primary gustatory responses in Drosophila melanogaster are used as an example, but this protocol can be adapted to study downstream neurons or other species.
For nearly two decades, in vivo calcium imaging has been an effective method for measuring cellular responses to taste stimuli in the fruit fly model organism, Drosophila melanogaster. A key strength of this methodology is its ability to record taste-induced neural responses in awake animals without the need for anesthesia. This approach employs binary expression systems (e.g., Gal4-UAS) to express the calcium indicator GCaMP in specific neurons of interest. This protocol describes a procedure in which flies expressing GCaMP are mounted with the labellum securely positioned, enabling fluorescence in the brain to be recorded at millisecond resolution under a confocal microscope while a solution is applied to the labellum, stimulating all labellar taste sensilla. The examples provided focus on calcium responses in primary gustatory receptor neurons of D. melanogaster. However, this approach can be adapted to record from other neurons of interest within the brain of Drosophilids or other insect species. This imaging method enables researchers to simultaneously record collective calcium responses from groups of gustatory neurons across the labellum, complementing electrophysiological tip recordings that quantify action potentials from individual neurons. The in vivo calcium imaging technique outlined here has been instrumental in uncovering molecular and cellular mechanisms of chemosensation, identifying unique temporal response patterns in primary taste neurons, investigating mechanisms of gustatory modulation, and exploring taste processing in downstream circuits.
The fruit fly, Drosophila melanogaster, is celebrated for the powerful genetic research tools available in this model organism. These tools provide the ability to readily manipulate specific genes in targeted cells, making it ideal for exploring fundamental neural circuits such as vision and chemosensation1,2,3. Gustation, through contact chemosensation, is a key neural pathway that regulates behaviors involved in feeding, mating, reproduction, and ultimately, the survival and fitness of animals4,5,6,7,8,9. Understanding how this important chemosensory information is encoded and transmitted requires describing the activity of the neurons in the circuits that are activated by taste stimuli.
In D. melanogaster, external gustatory receptor neurons (GRNs) are located on the forelegs, proboscis, and wings10,11. The labellum, at the end of the proboscis, contains hair-like structures called sensilla that can be mapped by their morphology based on size: long (L-type), intermediate (I-type), and short (S-type)10. Most of the GRNs are concentrated on this sensory organ, with each sensilla containing 2-4 different types of GRNs so that each taste modality is spread across the labellum12,13,14,15. While electrophysiological tip recordings can be used to quantify action potentials coming from GRNs in a single sensilla16, in vivo, calcium imaging can be used to isolate the activity of a specific type of GRN across the full labellum14,17. This same calcium imaging technique can also be used to study neural responses in downstream taste circuits18,19,20. Calcium imaging requires binary expression systems, such as Gal4-UAS21,22,23, and crossing a driver line containing cell-specific transcriptional activators to an effector line to get expression of a GCaMP in neurons of interest. When intracellular calcium levels rise, these genetically-encoded calcium indicators increase in fluorescence intensity so that the level of fluorescence is correlated with changes in neuronal activity24,25.
Here, a method for using calcium imaging to observe neural responses to taste stimuli in vivo is described. The overall goal of this method is to stimulate only the labellar GRNs to quantify taste-induced neural responses in the brains of awake flies. Examples are provided for using this method to record responses in the primary GRNs of the labellum in D. melanogaster, and the benefits and challenges of using this approach are discussed. This preparation was developed to allow experimenters the ability to apply a tastant solution to an immobilized fly labellum while under a confocal microscope to record neural responses when the entire sensory organ is immersed in a solution, which occurs in natural settings. The in vivo calcium imaging approach described here can be used to uncover novel tastant-receptor interactions8,14,26,27, temporal details of GRN responses27,28, molecular mechanisms of GRN modulation29,30, and taste processing in downstream circuits8,18,19,20,28,31.
The details of the reagents and the equipment used in this study are listed in the Table of Materials.
1. Preparation of adult hemolymph-like (AHL) solution
2. Mounting flies on the imaging chamber
3. Waxing the proboscis in an extended position
4. Dissection to reveal the brain region of interest
5. Imaging and taste stimulation
6. Image analysis
Figure 1Β provides details of the imaging chamber (Figure 1A,B) and waxer tip (Figure 1D) used in this preparation. Figure 1 also illustrates the main steps of the procedure for mounting flies (Figure 1C), waxing the proboscis into place (Figure 1E), dissecting over the brain region of interest (Figure 1F), and stimulating the labellum with a tastant while recording fluorescence in the brain (Figure 1G). To quantify taste-induced responses in primary gustatory receptor neurons (GRNs) of Drosophila melanogaster flies with Gr64f-Gal4 driving expression of UAS-GCaMP6f were produced to get the calcium indicator genetically expressed in all sugar-sensing "sweet" GRNs of the labellum14,27,30,32,33,34,35. For these experiments, a confocal microscope with the following components was used: an upright fluorescent microscope with 40 fps sCMOS camera, 10x and 40x objectives, spinning disk confocal, dichroic 488 emitters, and 488 nm solid-state lasers. The 40x objective was immersed in AHL and centered on the SEZ brain region to locate the baseline GCaMP signal in the axon terminals of these labellar GRNs (Figure 2A). A fluorescence image was captured every 100 ms during baseline (no stimulation), during 5 s of taste stimulation (stimulator moved over the labellum), and after stimulation until the fluorescence returned to baseline (Figure 2A,B). Water was used as a negative control, and 1 M sucrose was used as a positive control. The relative change in fluorescence was calculated as ΞF/F (z-score) for 13 flies and plotted over time to show the kinetics of the calcium responses during taste stimulation (Figure 2B). The peak ΞF/F (z-score) was plotted and used for statistical comparisons to indicate that the sucrose response in these cells is significantly higher than in water (Figure 2C). This technique captures that "sweet" GRNs have a strong peak upon sucrose onset that remains high with some decay over the stimulation period.
For comparison, this protocol was repeated in flies with a different driver, Gr66a-Gal4, expressing UAS-GCaMP6f specifically in all "bitter" GRNs on the labellum14,17,28,34,36. Similarly, the axon terminals of these GRNs were located in the SEZ: notice the projection pattern is distinct from the sugar-sensing GRNs (Figure 2D). The fluorescence was captured and analyzed as before, except for 100 mM caffeine, which was used as a positive control. The curve averaged from 11 flies shows a strong peak with the onset of caffeine stimulation, but there is also a small "off" response with stimulus removal that is known to occur with certain bitter stimuli28 (Figure 2E). This method allows for both "on" and "off" responses to be quantified to characterize the temporal patterns of taste-induced responses27,28. Here, only the "on" peaks were quantified to indicate the response to caffeine is significantly stronger than water (Figure 2F). The experiments in Figure 2 are highly reproducible and can be used to ensure the protocol is working properly.
Figure 1: Protocol illustrations for imaging taste-induced responses in the Drosophila brain. (A) Top view of the custom imaging chamber used to mount up to five flies at a time. (B) Details of the imaging chamber where the flies are mounted with measurements that comfortably fit the cervix of D. melanogaster. (C) Graphics indicating where to trim the tarsi (top left) and how to mount the fly into the cervix slot of the imaging chamber using forceps (bottom left). Photo of a mounted fly in the correct position in the imaging chamber (right). (D) Photo of the waxer tip (left), zoomed photo of the tip to indicate the approximate shape and size to target when using a sharpening stone to modify the standard tip (right). (E) Graphic illustration of waxing the proboscis into place using forceps (left), photo of a fly mounted with a properly waxed labellum (right). (F) Graphic illustration representing the dissection over the brain region of interest and application of AHL (left), photo of a fly with dotted circles around the area of the cuticle to remove when targeting the SEZ or SMP brain regions. X indicates regions of the cuticle to pinch for dissection (right). (G) Graphics and photos indicate the position of the mounted/dissected fly, the water immersion objective in AHL, the stimulator with a tastant over the proboscis, and the coverslip forming a barrier between these solutions. The side view zoomed out (left), and the top view was under the 10x objective (right). Please click here to view a larger version of this figure.
Figure 2: Example of calcium responses of labellar GRNs to taste stimuli. (A) Still captures from an image stack indicating the level of GCaMP fluorescence in a fly with Gr64f>GCaMP6f at baseline and during the peak response to 1 M sucrose, scale bar = 20 Β΅m. The dotted lines indicate the ROI for analysis. (B) Calcium response curves for n = 14 flies calculated as ΞF/F (z-score) and combined for water (negative control) and 1 M sucrose (positive control) to show kinetics; the black line under curves indicates when the stimulus is over the labellum. (C) Peak ΞF/F (z-score) for each fly plotted for statistical comparisons. Paired t-test, ****p < 0.0001. (D) Still captures from a video indicating the level of GCaMP fluorescence in a fly with Gr66a>GCaMP6f at baseline and during the peak response to 100 mM caffeine, scale bar = 20 Β΅m. The dotted lines indicate the ROI for analysis. (E) Calcium response curves for n = 11 flies calculated as ΞF/F (z-score) and combined for water (negative control) and 100 mM caffeine (positive control) to show kinetics: notice the small "off" response, black line under curves indicates when the stimulus is over the labellum. (F) Peak ΞF/F (z-score) for each fly plotted for statistical comparisons. Paired t-test, ****p < 0.0001. Please click here to view a larger version of this figure.
One of the most challenging aspects of this protocol is the micromanipulation dexterity needed to wax the labellum and perform the targeted dissections. An additional step to secure the labellum is necessary to stimulate each sensillum evenly across this sensory organ and visualize brain regions of interest. The custom imaging chamber used here is optimized for D. melanogaster, but the specifications of the chamber and the waxing approach may need to be modified for other insects. This protocol can be applied to other Drosophilids with little modification, but other members of the Brachycera suborder, such as bees and mosquitoes, may require changes to the mounting and dissection steps to account for differences in labial palp and head morphology. Alignment of the micromanipulator for the tastant delivery can also be challenging and requires initial testing with the specific microscope stage for optimization. If the wax is broken during the stimulation, it can result in leaks whereby the AHL and tastant in the capillary make contact. Pulling the capillaries and filing them down with a sharpening stone to fit more closely to the labellum can help prevent the tastant and AHL from making contact. Flies with any leaks or excessive brain movement must be excluded. When possible, always include a positive control for each animal to ensure the labellum and labellar nerves are not damaged from the waxing or dissection. The "sweet" and "bitter" examples shown here are recommended as robust control experiments.
The in vivo calcium imaging approach described here has been used to quantify taste-induced responses in primary taste neurons, higher-order neurons, and the whole SEZ in D. melanogaster to identify gustatory receptors and circuits8,14,17,18,19,20,27,28,30,31,34,35,36,37,38,39,40,41,
42,43,44,45,46,47,48. The widespread applications in this model organism are due to the readily available Gal4 and split-Gal4 drivers; thus, the need for genetically modified insects to get GCaMP expressed in specific neurons of interest is one limiting factor for this approach. Luckily, with advances in gene editing technology, this is becoming more accessible for insects beyond model organisms, and taste-induced responses using calcium imaging have recently been reported for the pest Drosophila suzukii49 and for vector-carrying mosquitoes50. As with all calcium imaging, some initial optimization of signal-to-noise may be necessary for the targeted neurons of interest. Signals can be enhanced by using brighter versions of GCaMP and by expressing two copies of GCaMP. Co-expressing RFP in target neurons can help to visualize the target neurons at baseline and can serve as a control for brain movement in regions that have a propensity to pulsate.
This protocol is specifically designed to isolate chemosensation from the labellum by removing the tarsi and antennae, waxing over the maxillary palps, and limiting ingestion so that no pharyngeal GRNs are stimulated. However, adjustments to this protocol can be made to include chemosensation from tarsal or pharyngeal GRNs. If the tarsi are left intact, the legs can be stimulated alone or in addition to the labellum by creating a large bubble of tastant solution at the end of the capillary. There is the potential for a fly to kick andΒ move the coverslip if the tarsi are left intact;Β therefore, waxing the tarsi near the baseΒ can be considered to help preventΒ unwanted movements. The current example includes the step of cutting the esophagus to avoid pharyngeal GRN stimulation and to better visualize labellar projections in the SEZ, but this same preparation has been previously adapted to quantify pharyngeal GRN responses by leaving the esophagus intact and imaging lateral pharyngeal projections36. This previous application used an appetitive sugar stimulus, which flies will freely consume to stimulate pharyngeal GRNs, but flies will not readily consume an aversive stimulus to activate bitter pharyngeal GRNs, which is one limitation of this approach. An additional limitation is that the responses of GRNs located in the wings of Drosophila11 cannot be readily studied with this approach.
While the in vivo calcium imaging described here has become the standard method for studying higher-order taste-induced responses8,18,19,20,28, there are currently several other approaches for quantifying primary labellar GRN responses to tastants in flies. The in vivo calcium imaging approach described here records GCaMP changes in the axon terminals in the brain, but an ex vivo approach has also been used to quantify cell body GCaMP in labellar GRNs33. Similarly, another mounting approach has been described for imaging the cell bodies of either labellar or tarsal GRNs in intact flies51. Electrophysiology continues to be a popular and effective technique for studying the responses of primary taste neurons in insects13,16,32,52,53,54,55,56,57,58,59,60,64,62,63,64,65. This does not require the need for genetically encoded calcium sensors and is a more direct quantification of neuronal activity. However, responses from only one sensilla can be recorded at a time whereas calcium imaging can record from a full population of GRNs simultaneously. The calcium imaging approach was used to discover the unique temporal dynamics of "on" and "off" responses in GRNs with certain stimuli27,28, but a recent advancement in electrophysiological recordings from the base of taste sensilla in D. melanogaster now allows for "off" responses to be quantified at the level of action potentials53. Interestingly, the modulation of primary GRN sensitivity by hunger was detected via calcium imaging but not at the level of action potentials with electrophysiology29, yet both electrophysiological tip recordings and calcium imaging can capture a change in GRN sensitivity with diet30,66. Thus, electrophysiology remains an important, complementary approach to calcium imaging for identifying taste ligands and receptors and for understanding how various factors modulate the sensitivity of primary gustatory receptor neurons.
The authors have no conflicts of interest and nothing to disclose.
We would like to thank the Bloomington Drosophila Stock Center for fly stocks and the University of Vermont IMF Labs for their help in the fabrication of the custom imaging chambers. We would also like to acknowledge BioRender for the creation of graphic illustrations and Kayla Audette for contributing to the design of these graphics. This work was supported by new lab startup funds from the University of Vermont and the National Science Foundation award number 2332375. The graphics in Figure 1 were generated withΒ www.BioRender.com.
Name | Company | Catalog Number | Comments |
CaCl2 | Sigma-Aldrich | C7902 | For AHL |
Caffeine | Sigma-Aldrich | C0750 | For a "bitter" taste stimulus |
Clear nail polish- quick dry | Many vendors | Example: Sally Hansen Xtreme wear (clear) | |
CO2 fly pad station | Genesee Scientific | 59-122BC | Includes tubing, a gun to initially anesthetize flies, and a pad to deliver continuous anesthesia |
CO2 supply (cylinders) | Airgas | USP50 | For anesthesia |
Confocal or two-photon microscope | Many vendors | Upright microscope, high signal to noise and rapid capture capabilities, 10X air immersion objective, 25-40X water immersion objective, accompanying hardware and software | |
Coverslips | Globe Scientific | 1404-15 | 22 x 22 mm, No 1.5: for this specific imaging chamber, score and cut in half to get 11 x 22 mm coverslips |
D. melanogaster: Gr64f-Gal4 | Bloomington Drosophila Stock Center | 57669 | For driving GCaMP expression in 'sweet' gustatory receptor neurons of the labellum |
D. melanogaster: Gr66a-Gal4 | Bloomington Drosophila Stock Center | 57670 | For driving GCaMP expression in 'bitter' gustatory receptor neurons of the labellum |
D. melanogaster: UAS-GCaMP6f | Bloomington Drosophila Stock Center | 42747 | For getting GCaMP expression when crossed to a Gal4 driver line |
Dental Waxer | Pearson Dental | 49-00-54 | Digital wax carver, comes with tips that can be modified and sharpened small enough to deliver wax along the fly proboscis |
Dissection microscope | Many vendors | .63 - 6.3X for optimal viewing but with sufficient working distance to perform dissections under the microscope | |
Dissection scissors | Fine Science Tools | 15000-08 | This pair or any similar dissection scissors are appropriate |
Empty pipette tip box | Free- many vendors | For humidity chamber: needs enough space so that the imaging chamber can sit and the lid can close without bumping the chamber | |
Filter flask | Millipore-Sigma | CLS431097 | For filtering AHL stocks |
Glass capillary | World Precision Instruments | TW100-4 | This size fits well over the D. melanogaster labellum without needing modification, but other capillaries can be pulled and filed down to an appropriate size |
HEPES | Sigma-Aldrich | BP310 | For AHL |
ImageJ (FIJI) | NIH | https://imagej.nih.gov/ij | Image analysis software |
Imaging Chamber | IMF Labs | Custom item | The custom-made chamber in this example can be ordered at https://www.uvm.edu/research/imf/forms/contact-us. Base: 6061 aluminum, Holding Clamps: Black Delrin (Acetal), Insert: Moisture Resistant polyester (PET). Manual and CNC milling machines for fabrication. |
KCl | Sigma-Aldrich | P9541 | For AHL |
Kim wipes | Millipore-Sigma | Z188956 | For humidity chamber, wiping off forceps, removing solutions from capillaries, etc. |
MgCl2 | Sigma-Aldrich | M9272 | For AHL |
Micromanipulator | Tritech Research | U-31CF, USM-6, MINJ-4 | This example uses a magnet to attach the micromanipulator to the stage, other configurations are possible |
NaCl | Sigma-Aldrich | S7653 | For AHL |
NaH2PO4 | Sigma-Aldrich | 567545 | For AHL |
NaHCO3 | Sigma-Aldrich | S6014 | For AHL |
p10 pipette and tips | Many vendors | For filling the capillaries with tastants | |
p200 pipette and tips | Many vendors | For AHL | |
Parafin wax | Many vendors | Β White/clear block of wax often found in craft stores | |
Ribose | Sigma-Aldrich | W379301 | For AHL |
Semi-sharp forcepsΒ | Fine Science Tools | 11252-20 | Blunted to approximately tip size C |
Sharp forceps | Fine Science Tools | 11252-20 | Sharpened to tip size A |
Sharpening stone | Fine Science Tools | 29000-00 | For modifying dental waxer tips and forceps |
Sucrose | Sigma-Aldrich | S0389 | For a "sweet'"taste stimulus |
Toothpick | Many vendors | Small tip for nail polish application |
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