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Stereotaxic surgery to target brain sites in mice commonly involves access through the skull bones and is guided by skull landmarks. Here we outline an alternative stereotaxic approach to target the caudal brainstem and upper cervical spinal cord via the cisterna magna that relies on direct visualization of brainstem landmarks.
Stereotaxic surgery to target brain sites in mice is commonly guided by skull landmarks. Access is then obtained via burr holes drilled through the skull. This standard approach can be challenging for targets in the caudal brainstem and upper cervical cord due to specific anatomical challenges as these sites are remote from skull landmarks, leading to imprecision. Here we outline an alternative stereotaxic approach via the cisterna magna that has been used to target discrete regions of interest in the caudal brainstem and upper cervical cord. The cisterna magna extends from the occipital bone to the atlas (i.e., the second vertebral bone), is filled with cerebrospinal fluid, and is covered by dura mater. This approach provides a reproducible route of access to select central nervous system (CNS) structures that are otherwise hard to reach due to anatomical barriers. Furthermore, it allows for direct visualization of brainstem landmarks in close proximity to the target sites, increasing accuracy when delivering small injection volumes to restricted regions of interest in the caudal brainstem and upper cervical cord. Finally, this approach provides an opportunity to avoid the cerebellum, which can be important for motor and sensorimotor studies.
Standard stereotaxic surgery to target brain sites in mice1 commonly involves fixation of the skull using a set of ear bars and a mouth bar. Coordinates are then estimated based on reference atlases2,3, and skull landmarks, namely, bregma (the point where the sutures of the frontal and parietal bones come together) or lambda (the point where the sutures of the parietal and occipital bones come together; Figure 1A,B). Through a burr hole into the skull above the estimated target, the target region can then be reached, either for delivery of ....
The author declares that the protocol follows the guidelines of the Institutional Animal Care and Use Committee at Beth Israel Deaconess Medical Center.
1. Preparation of surgical instruments and stereotaxic frame
NOTE: The surgery is performed under aseptic conditions. Sterility is maintained using the sterile tip technique.
The cisterna magna approach makes it possible to target caudal brainstem and upper cervical cord structures that are otherwise hard to reach via standard stereotaxic approaches or are prone to inconsistent targeting. The surgery to reach the cisterna magna requires incisions of the skin, a thin layer of trapezius muscle, and opening of the dura mater and is therefore well tolerated by mice. It is especially efficient and less invasive when targeting multiple (longitudinally dispersed or bilateral) sites, as it d.......
Standard stereotaxic surgery commonly relies on skull landmarks to calculate the coordinates of target sites in the CNS1. Target sites are then accessed via burr holes that are drilled through the skull1. This method is not ideal for the caudal brainstem as target sites are located distant from the skull landmarks in the anteroposterior and dorsoventral planes2 and as the anatomy of the skull and overlying muscles make access challenging
This work was supported by R01 NS079623, P01 HL149630, and P01 HL095491.
....Name | Company | Catalog Number | Comments |
Alcohol pad | Med-Vet International | SKU: MDS090735Z | skin preparation for the prevention of surgical site infection |
Angled forceps, Dumont #5/45 | FST | 11251-35 | only to grab dura |
Betadine pad | Med-Vet International | SKU:PVP-PAD | skin preparation for the prevention of surgical site infection |
Cholera toxin subunit-b, Alexa Fluor 488/594 conjugate | Thermo Fisher Scientific | 488: C34775, 594: C22842 | Fluorescent tracer |
Clippers | Wahl | Model MC3, 28915-10 | for shaving fur at surgical site |
Electrode holder with corner clamp | Kopf | 1770 | to hold glass pipette |
Flowmeter | Gilmont instruments | model # 65 MM | to regulate flow of isoflurane and oxygen to mouse on the surgical plane |
Fluorescent microspheres, polystyrene | Thermo Fisher Scientific | F13080 | Fluorescent tracer |
Heating pad | Stoelting | 53800M | thermoregulation |
Induction chamber with port hook up kit | Midmark Inc | 93805107 92800131 | chamber providing initial anasthesia |
Insulin Syringe | Exelint International | 26028 | to administer saline and analgesic |
Isoflurane | Med-Vet International | SKU:RXISO-250 | inhalant anesthetic |
Isoflurane Matrix VIP 3000 vaporizer | Midmark Inc | 91305430 | apparatus for inhalant anesthetic delivery |
Laminectomy forceps, Dumont #2 | FST | 11223-20 | only to clean dura |
Medical air, compressed | Linde | UN 1002 | used with stimulator & PicoPump for providing air for precision solution injection |
Meloxicam SR | Zoo Pharm LLC | Lot # MSR2-211201 | analgesic |
Microhematocrit borosilicate glass pre calibrated capillary tube | Globe Scientific Inc | 51628 | for transfection of material to designated co-ordinates |
Mouse adaptor | Stoelting | 0051625 | Â adapting rat stereotaxic frame for mouse surgery |
Needle holder, Student Halsted- Mosquito Hemostats | FST | 91308-12 | for suturing |
Oxygen regulator | Life Support Products | S/N 909328, lot 092109 | regulate oxygen levels from oxygen tank |
Oxygen tank, compressed | Linde | USP UN 1072 | provided along with isoflurane anasthesia |
Plastic card | not applicable | not applicable | any firm plastic card, cut to fit the stereotactic frame (e.g. ID card) |
Pneumatic PicoPump ( or similar) | World Precision Instruments (WPI) | SYS-PV820 | For precision solution injection |
Saline, sterile | Mountainside Medical Equipment | H04888-10 | to replace body fluids lost during surgery |
Scalpel handle, #3 | FST | 10003-12 | to hold scalpel |
Scissors, Wagner | FST | 14070-12 | to cut polypropylene suture |
Spring scissors, Vannas 2.5mm with accompanying box | FST | 15002-08 | scissors only to open dura, box to elevate body |
Stereotactic micromanipulator | Kopf | 1760-61 | attached to electrode holder to adjust position based on co-ordinates |
Stereotactic 'U' frame assembly and intracellular base plate | Kopf | 1730-B, 1711 | frame for surgery |
Sterile cotton tipped applicators | Puritan | 25-806 10WC | absorbing blood from surgical field |
Sterile non-fenestrated drapes | Henry Schein | 9004686 | for sterile surgical field |
Sterile opthalmic ointment | Puralube | P1490 | ocular lubricant |
Stimulator & Tubing | Grass Medical Instruments | S44 | to provide controlled presurred air for precision solution injection |
Surgical Blade #10 | Med-Vet International | SKU: 10SS | for skin incision |
Surgical forceps, Extra fine Graefe | FST | 11153-10 | to hold skin |
Surgical gloves | Med-Vet International | MSG2280Z | for asceptic surgery |
Surgical microscope | Leica | Model M320/ F12 | for 5X-40X magnification of surgical site |
Suture 5-0 polypropylene | Oasis | MV-8661 | to close the skin |
Tegaderm | 3M | 3M ID 70200749250 | provides sterile barrier |
Universal Clamp and stand post | Kopf | 1725 | attached to stereotactic U frame and intracellular base plate |
Wound hook with hartman hemostats | FST | 18200-09, 13003-10 | to separate muscles and provide surgical window |
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