The authors are financially supported by the Swiss National Science Foundation through an operating grant N&#176; 31003A-149566 (to N.D.), and The Sir Jules Thorn Charitable Overseas Trust through a Young Investigator Subsidy (to P.N.).

Ethik Hinweise: Alle Tier Manipulationen wurden in strikter Übereinstimmung mit den Richtlinien der Tierforschungsausschuss der Universität Genf durchgeführt. 1. Herstellung von Phagozytische Ziele <ol><li> Werden 20 mg getrocknetes Zymosan bis 10 ml steriler phosphatgepufferter Salzlösung (PBS). Wirbel und in einem kochenden Wasserbad für 10 min. Kühl und Zentrifugation bei 2.000 xg für 5 min. </li><li> Entfernen Sie den Überstand resuspendieren in 1 ml PBS und beschallen für 10 Minuten in einem Wasserbad Ultraschallgerät. Übertragen Sie 500 ul zu zwei 1,5-ml-Röhrchen. Zentrifugieren bei 11.000 xg für 5 min. </li><li> Wiederholen Sie den Waschvorgang mit 500 ul PBS. Die gekochten Zymosan kann aliquotiert werden, eingefroren und bei -20 ° C gelagert. </li><li> Zweimal waschen Zymosan in 500 ul frisch hergestellte 0,1 M Na 2 CO 3, pH 9,3, wie oben beschrieben (Schritt 1.2). </li><li> Resuspendieren in 490 &amp; mgr; l nach dem letzten Waschen. Zugabe von 10 ul 10 mg / ml FITC in Dimethylsulfoxid gelöst sulfoxide (DMSO), Wirbel, mit Folie abdecken, und Inkubation unter Rühren 4 Stunden bei RT. </li><li> Um ungebundene Farbe zu entfernen, wie oben (Schritt 1.2) waschen, zuerst mit 0,5 ml DMSO + 150 &amp; mgr; l PBS, dann 0,5 ml DMSO + 300 &amp; mgr; l PBS, dann 0,5 ml DMSO + 450 &amp; mgr; l PBS, dann PBS alleine. </li><li> Graf Zymosan mit einem Hämocytometer. 1 ul Zymosan zu 500 ul PBS, Wirbel, dann werden 10 &amp; mgr; l an den Rand des Hämocytometer Kammer, wo es das Deckglas über das zentrale Netz platziert erfüllt. Montieren Sie das Hämocytometer auf einer Hellfeld-Mikroskop mit einem 20x-Objektiv ausgestattet. </li><li> Konzentrieren Sie sich auf der oberen linken Ecke, die 16 Plätze und zählt alle Zymosan Partikel in diesem Bereich mit einem Handtallykostenzähler. Wiederholen Sie mit der rechten unteren Ecke. Berechnen die Zymosan-Konzentration unter Verwendung der folgenden Gleichung: Zymosan Konzentration = Count / 2 x 500 x 10 4 Zymosan / ml. Markierten Zymosan kann aliquotiert werden, eingefroren und bei -20 ° C gelagert. </li><li> Opsonisieren das markierte Zymosan with ein Kaninchen-Anti-Zymosan Antikörper bei 1: 100 Verdünnung. Vortex und Inkubation für 1 Stunde in einem 37 ° C Wasserbad. Mit 500 &amp; mgr; l PBS waschen, wie oben beschrieben (Schritt 1.2). Hinweis: Die Beschallung ist sehr zu empfehlen, vor allem nach Opsonisierung, wie Zymosan neigt dazu, Klumpen, die später auf der Analyse erschweren kann bilden. Opsonisierung mit 65% v / v Ratten- oder Humanserum kann als Alternative verwendet werden. </li><li> Zählen Zymosan mit einem Hämocytometer wie in den Schritten 1.7-1.8 beschrieben, und mit Wasser auf 100 x 10 &amp; sup6; Teilchen / ml. Opsonisierung mit anderen phagozytischen Stimulatoren wie Komplement oder keinen Opsonierung kann alternativ durchgeführt werden. </li></ol> 2. Live Video-Mikroskopie <ol><li> Isolieren primäre Maus Neutrophilen, wie an anderer Stelle ausführlich beschrieben 38. <ol><li> Alternativ können Sie jede phagozytischen Zelltyp. Halten Neutrophilen auf Eis in Roswell Park Memorial Institute (RPMI) 1640-Medium mit 5% fötalem Kälberserum (v / v), 200 U Penicillin / streptomyci ergänztn, in einer Konzentration von 10 x 10 6 Zellen / ml bis zur Verwendung. Andere Zelltypen kann 1-4 Tage vor ausgesät werden. </li></ol></li><li> In 2 × 10 5 (20 ul) von Neutrophilen an der Mitte einer 35 mm Glasbodenschale, verbreiten sie den Tropfen durch Zugabe von 50 ul Medium und bei 37 ° C für 5 Minuten, damit Zellen zu haften. </li><li> 1 ml ausgewogener Hank-Salzlösung (HBSS) bis 37 ° C, die die spezielle MPO-Inhibitor 4-Amino-hydrazid (4-ABH, 10 &amp; mgr; M) erwärmt. Unspezifische MPO-Inhibitoren, wie Natriumazid (5 mM), können ebenfalls verwendet werden, jedoch wurden kürzlich vorgeschlagen, um zusätzliche nicht-spezifischen Effekte auf pH 39 auszuüben. </li><li> Montieren Sie den Teller auf einem Weitfeld-Fluoreszenzmikroskop mit einem 37 ° C Heizungsanlage und einem 40X Öl-Objektiv ausgestattet. Inkubieren Zellen ohne Bildgebung für 10 Minuten, damit Zellen und Anlagen ins Gleichgewicht. </li><li> Passen Sie die Mikroskopeinstellungen, um eine TEM-Hellfeldbild zu erwerben [phase oder Differentialinterferenzkontrast (DIC), falls verfügbar] mit 440 nm oder 490 nm Anregungs- und 535 nm Emissions alle 30 sec. </li><li> Die Belichtungszeit und die Erfassungsfrequenz entsprechend dem Mikroskopsystem zu viel Photobleichen und Phototoxizität und in Abhängigkeit von den experimentellen Fragen gestellt vermeiden. Start der Bildaufnahme. </li><li> Nach 2 min, fügen Sie 10 x 10 6 (50 ul) opsonisiertes FITC-Zymosan in die Mitte der Schale. Einstellen target: Zellverhältnissen in Abhängigkeit von der Art von Phagozyten und Ziel verwendet. </li><li> Weiterhin Bildgebung für 30 min. Nach 30 Minuten beenden Sie den Zeitraffer-Akquisition und starten Sie einen Timer. Bewegen Sie die Bühne und erfassen 10 oder mehr Snapshots in unterschiedlichen Sicht für Bild in anderen Phagosomen, alle innerhalb von 5 min. </li></ol> 3. Kalibrierung und Kontrollexperimente <ol><li> Vorbereitung der pH Kalibrierlösungen (Rezepturen sind in Tabelle 1 beschrieben) vor dem Tag des Experiments und gefrier in 10 ml-Aliquots.Tauen die Kalibrierungslösungen und warm bis 37 ° C in einem Wasserbad. Den pH-Wert mit einem pH-Meter und Aufzeichnung der tatsächlichen pH-Wert der Lösungen. </li><li> Montieren Sie eine peristaltische Pumpe an der Bodenschale Glas vor der Bildaufnahme und führen Sie Live-Videomikroskopie, wie oben (Abschnitt 2) beschrieben. </li><li> Am Ende der 30 Minuten Erfassungsperiode schalten Sie die Pumpe auf, um die Lösung in der Schale zu entfernen, fügen Sie 1 ml der erste Kalibrierungslösung und die Pumpe stoppen. </li><li> Warten Sie, bis das Signal stabilisiert, in der Regel 5 min. Wiederholen Sie mit die Eichlösungen. <ol><li> Zuführen mindestens eine Kalibrierung pro Versuchstag und kalibrieren, beginnend mit dem höchsten pH-Wert und arbeiten sequentiell auf den niedrigsten, sowie ausgehend von dem niedrigsten pH-Wert und arbeiten sequentiell in Richtung der Höhe. </li></ol></li><li> Als Kontrolle wurden 100 ul 100 uM NADPH-Oxidase-Hemmer diphenyl propionium Iodid (DPI) in HBSS, um Zellen in der Bodenschale Glas verdünnt in 900 &amp; mgr; l HBSS, undInkubation für 10 min. </li><li> Starten Akquisition und fügen Zymosan wie oben (Schritt 2.7). Nach 15 min der Phagozytose, mit 10 ul 10 uM V-ATPase-Inhibitor Concanamycin A (ConcA) in HBSS verdünnt und weiter Bildgebung für weitere 15 min. </li></ol> 4. Analyse <ol><li> Analyse von Zeitraffer-Filmen und Phagosom Snapshots. Hinweis: Die folgenden Anweisungen spezifisch für ImageJ sind. Schritt-für-Schritt-Anleitungen können in Abhängigkeit von der verwendeten Software unterschiedlich sein, aber die in diesem Abschnitt beschriebenen Funktionen sind in den meisten professionellen Bildanalyse-Software. <ol><li> Öffnen Sie die Bilder mit professionellen Bildanalyse-Software. Subtrahieren Sie den Hintergrund in der 490-Kanal, indem ein kleines Quadrat ROI mit dem Quadrat Polygon Auswahl-Werkzeug in einem Bereich, wo es keine Zellen, und klicken Sie auf Plugins&gt; BG Subtraktion von ROI. Dann laden Sie die gleiche ROI auf der 440-Kanal, indem Sie auf Bearbeiten&gt; Auswahl&gt; Auswahl wiederherstellen und wiederholen. </li><li>Machen Sie eine 32-Bit-Verhältnis Bild des 490 Kanal geteilt durch die 440-Kanal, indem Sie Prozess&gt; Bild Calculator ..., eine entsprechende Bilder in den Image1 und Image2 Dropdown-Menüs, wählen Sie dann &#39;Teilen&#39; im Dropdown-Menü Bedienung und die Überprüfung der 32-bit (float) Ergebnis Kontrollkästchen. </li><li> Ändern Sie die Farbcodierung Verweistabelle auf ein Verhältnis-kompatiblen Farbcodierung, indem Sie auf Bild&gt; Lookup Tables&gt; Rainbow RGB. Threshold das Verhältnis Bild, um es durch Anklicken zu beseitigen Bild 0 und unendlich Pixel&gt; Anpassen&gt; Schwellenwert .... Passen Sie die Bildlaufleisten, so dass Zymosan in rot angezeigt wird, und klicken Sie auf Anwenden, sicherstellen, dass die Set Hintergrundpixel Kontrollkästchen NaN, um ausgewählt. </li><li> Kombinieren Sie dieses Verhältnis Stapel mit der Hellfeld-Kanal in einem Mehrkanal-Verbund indem Sie auf Bild&gt; Farbe&gt; Merge Kanäle, und die Auswahl der Hellfeldbild in der grauen Kanal Dropdown-Menü und das Verhältnis Bild im Grünkanal im Dropdown-Menü, und Auswählen desHalten Sie Quellbilder Check-Box. Scannen Sie die Zeitraffer-Filme oder Snapshots, um festzustellen, die Phagosomen analysiert werden sollen. Die Hellfeldkanal ist sinnvoll, für diese. </li><li> Zeichnen Sie Bereiche von Interesse (ROI) mit dem ovalen Polygon-Auswahl-Werkzeug in der Umgebung von Phagosomen und fügen Sie sie der ROI-Manager, indem Sie auf Analysieren&gt; Tools&gt; ROI Manager&gt; hinzufügen. Messen Sie ihren Zymosan Intensitätsverhältnis, indem Sie auf Mehr&gt; Multi-Measure und Abwahl der eine Zeile pro Stück Kontrollkästchen. </li><li> Für Zeitraffer-Filme, Phagosomen Spur ein zu einer Zeit, indem eine ROI, tippen Sie Strg + M zu jedem Zeitpunkt zu messen, und das Bewegen des ROI, wenn notwendig, um Intensitätswerte über die Zeit zu verfolgen. Kopieren Sie die Messungen aus dem Ergebnisfenster in ein Tabellenkalkulationsprogramm. Anmerkung: Analyse von 15 (5 Zeitverläufe pro Experiment x 3) unabhängigen Experimenten ist ideal, aber in Abhängigkeit von der beobachteten Variabilität kann mehr oder weniger erforderlich sein. Speichern der ROIs wird immer empfohlen. Einige Softwarepakete ermöglichen Bild registration und dynamische Aktualisierung von ROIs, diesen Teil der Analyse zu erleichtern. </li></ol></li><li> Umwandlung von Fluoreszenz auf pH-Werte <ol><li> Messen Sie das Verhältnis 490/440 für Phagosomen in den Kalibrierungs Zeitraffer-Filme, wie in Abschnitt 4.1 beschrieben. </li><li> In einer Tabellenkalkulation, zeichnen die Verhältniswerte über die Zeit und berechnet die Durchschnittsverhältniswerte von allen Phagosomen innerhalb des Sichtfeldes (gewöhnlich 5-20) 5 Zeitpunkten innerhalb der Mitte der Zeitperiode entsprechend jedem pH-Kalibrierung Lösung. (Siehe auch die roten Kästen in 5A.) </li><li> Zeichnen Sie diese durchschnittlich 490/440 Ratio-Werte gegenüber dem tatsächlich gemessenen pH-Wert. Kombinieren Sie mindestens 3 unabhängigen Kalibrierungen in einem einzigen Graphen. Verwenden Sie einen statistischen oder numerische Software-Paket, um eine nichtlineare Regression (Best-Fit-Kurve) durchführen, in der Regel an einen sigmoidalen Gleichung. Hinweis: Zum Beispiel in 5B die Gleichung verwendet wurde, war eine Boltzmann sigmoidal [Y = Bottom + ((Oben-Unten)/ (1 + EXP ((V50-X) / Slope))], wobei Y-Werte sind die 490/440-Verhältnisse, X sind die pH-Werte und die Oben, Unten, sind V50 und Steigungsparameter von der Software berechnet. </li><li> Verwenden Sie die erhaltene Gleichung zur Verhältniswerte um pH zu verwandeln. Hinweis: Zum Beispiel in 5B die für die Eichkurve in Gegenwart von Natriumazid erhalten Gleichung 490/440 Verhältnis = 1,103 + [(2,89 bis 1,103) / (1 ​​+ EXP ((6.993-pH) /0.9291)] . Die Auflösung nach pH ergibt die folgende Gleichung: pH = 6,993 - 0,9291 * [LN ((1,178 / (Ratio-1.103)) - 1))]. </li></ol></li></ol>

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C., Grinstein, S. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Determinants+of+the+phagosomal+pH+in+neutrophils.">Determinants of the phagosomal pH in neutrophils.</a> J Biol Chem. 277 (8), 6059-6066 (2002).</li><li>Segal, A. W., Geisow, M., Garcia, R., Harper, A., Miller, R. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=The+respiratory+burst+of+phagocytic+cells+is+associated+with+a+rise+in+vacuolar+pH.">The respiratory burst of phagocytic cells is associated with a rise in vacuolar pH.</a> Nature. 290 (5805), 406-409 (1981).</li><li>Savina, A., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=NOX2+controls+phagosomal+pH+to+regulate+antigen+processing+during+crosspresentation+by+dendritic+cells.">NOX2 controls phagosomal pH to regulate antigen processing during crosspresentation by dendritic cells.</a> Cell. 126 (1), 205-218 (2006).</li><li>Rybicka, J. M., Balce, D. R., Chaudhuri, S., Allan, E. R., Yates, R. M. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Phagosomal+proteolysis+in+dendritic+cells+is+modulated+by+NADPH+oxidase+in+a+pH-independent+manner.">Phagosomal proteolysis in dendritic cells is modulated by NADPH oxidase in a pH-independent manner.</a> EMBO J. 31 (4), 932-944 (2012).</li><li>Mantegazza, A. R., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=NADPH+oxidase+controls+phagosomal+pH+and+antigen+cross-presentation+in+human+dendritic+cells.">NADPH oxidase controls phagosomal pH and antigen cross-presentation in human dendritic cells.</a> Blood. 112 (12), 4712-4722 (2008).</li><li>Balce, D. R., Allan, E. R., McKenna, N., Yates, R. M. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=gamma-Interferon-inducible+lysosomal+thiol+reductase+(GILT)+maintains+phagosomal+proteolysis+in+alternatively+activated+macrophages.">gamma-Interferon-inducible lysosomal thiol reductase (GILT) maintains phagosomal proteolysis in alternatively activated macrophages.</a> J Biol Chem. 289 (46), 31891-31904 (2014).</li><li>Sanjurjo, L., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=The+scavenger+protein+apoptosis+inhibitor+of+macrophages+(AIM)+potentiates+the+antimicrobial+response+against+Mycobacterium+tuberculosis+by+enhancing+autophagy.">The scavenger protein apoptosis inhibitor of macrophages (AIM) potentiates the antimicrobial response against Mycobacterium tuberculosis by enhancing autophagy.</a> PLoS One. 8 (11), e79670 (2013).</li><li>Yuan, Z., Zhi, L., Li-Juan, Z., Hong-Tao, X. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=The+Utility+of+Chloroquine+in+Cancer+Therapy.">The Utility of Chloroquine in Cancer Therapy.</a> Curr Med Res Opin. , 1-12 (2015).</li><li>Ohkuma, S., Poole, B. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Fluorescence+probe+measurement+of+the+intralysosomal+pH+in+living+cells+and+the+perturbation+of+pH+by+various+agents.">Fluorescence probe measurement of the intralysosomal pH in living cells and the perturbation of pH by various agents.</a> Proc Natl Acad Sci U S A. 75 (7), 3327-3331 (1978).</li><li>El Chemaly, A., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=VSOP/Hv1+proton+channels+sustain+calcium+entry,+neutrophil+migration,+and+superoxide+production+by+limiting+cell+depolarization+and+acidification.">VSOP/Hv1 proton channels sustain calcium entry, neutrophil migration, and superoxide production by limiting cell depolarization and acidification.</a> J Exp Med. 207 (1), 129-139 (2010).</li><li>Levine, A. P., Duchen, M. R., Segal, A. W. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=The+HVCN1+channel+conducts+protons+into+the+phagocytic+vacuole+of+neutrophils+to+produce+a+physiologically+alkaline+pH.">The HVCN1 channel conducts protons into the phagocytic vacuole of neutrophils to produce a physiologically alkaline pH.</a> bioRxiv. , (2014).</li><li>Al-Fageeh, M. B., Smales, C. M. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Control+and+regulation+of+the+cellular+responses+to+cold+shock:+the+responses+in+yeast+and+mammalian+systems.">Control and regulation of the cellular responses to cold shock: the responses in yeast and mammalian systems.</a> Biochem J. 397 (2), 247-259 (2006).</li><li>Yui, N., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Basolateral+targeting+and+microtubule-dependent+transcytosis+of+the+aquaporin-2+water+channel.">Basolateral targeting and microtubule-dependent transcytosis of the aquaporin-2 water channel.</a> Am J Physiol Cell Physiol. 304 (1), C38-C48 (2013).</li><li>Griffiths, G. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=On+phagosome+individuality+and+membrane+signalling+networks.">On phagosome individuality and membrane signalling networks.</a> Trends Cell Biol. 14 (7), 343-351 (2004).</li><li>Poburko, D., Santo-Domingo, J., Demaurex, N. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Dynamic+regulation+of+the+mitochondrial+proton+gradient+during+cytosolic+calcium+elevations.">Dynamic regulation of the mitochondrial proton gradient during cytosolic calcium elevations.</a> J Biol Chem. 286 (13), 11672-11684 (2011).</li></ol>

The authors have nothing to disclose.

Obwohl zeitaufwendiger als alternative Verfahren, wie Spektroskopie und FACS, die eine ähnliche Strategie unter Verwendung eines pH-empfindlichen Farbstoff, Ziele gekoppelt einzusetzen, sondern messen die durchschnittliche pH-Wert einer Population von Phagosomen, bietet mikroskopische mehrere Vorteile. Erste ist, dass innere und äußere gebunden, aber nicht internalisierten Partikel können leicht unterschieden werden, ohne andere Chemikalien, wie Trypan-Blau oder Antikörper hinzuzufügen, Abschreckhärtung oder Etik...

Phagocytosis, the process through which innate immune cells engulf large particles, evolved from the eating mechanism of single-celled organisms, and involves binding to a target, enveloping it with a membrane and pinching the membrane off to form a vacuole within the cytosol called a phagosome. While the phagosomal membrane is derived from the plasma membrane, active protein and lipid sorting, as well as fusion with endomembranes during phagosome formation, transform the phagosome into a distinct organelle within the cell with degradative properties that allow the killing, neutralization and breakdown of the ingested material1-3. This process, called phagosomal maturation, relies on the delivery of a host of proteolytic and microbicidal enzymes, including the nicotinamide adenine dinucleotide phosphate (NADPH) oxidase which transfers electrons into phagosomes producing the strong oxidant O2- and its derivative reactive oxygen species (ROS) 2,4. 
The luminal pH of phagosomes has a profound influence on several events required for phagosome function. First, pH influences trafficking of endomembranes in general, as pH-dependent conformational changes of transmembrane trafficking regulators alters the recruitment of trafficking determinants such as Arfs, Rabs and vesicular coat-proteins, which in turn define which vesicles may fuse with phagosomes 5-8. Second, the ionic composition of the phagosomal lumen is also transformed as phagosomes mature, and some ion transporters, such as the Na+/H+ exchanger or ClC family Cl-/H+ antiporters, which promote phagocytic function, rely on H+ translocation 9,10. Similarly, ROS production is intimately linked with phagosomal pH. ROS and its toxic oxidant byproducts have long been recognized as crucial for phagosomal killing in neutrophils 4,11,12, and have been shown to play critical roles in other phagocytes including macrophages, dendritic cells (DCs) and amoeba 13-16. The NADPH oxidase is an electrogenic enzyme that releases H+ in the cytosol as NADPH is consumed, and that requires the simultaneous transfer of H+ through companion HVCN1 channels alongside the transported electrons into the phagosomal lumen, in order to alleviate the massive depolarization that would otherwise lead to self-inhibition of the enzyme 17-21. Finally, several proteolytic enzymes have optimal activity at different pH, so time-dependent phagosomal pH changes can influence which enzymes are active and when. The importance of phagosomal pH is highlighted by organisms such as Mycobacterium tuberculosis, Franciscella tularensis and Salmonella typherium that subvert phagocytic killing at least in part by altering phagosomal pH 22-24.
In mammals the main phagocytes are neutrophils, macrophages and dendritic cells, and depending on cell type, time-dependent phagosomal pH changes can vary widely, and appear to play different roles. In macrophages a strong and rapid acidification mediated by the ATP-dependent proton pump vacuolar ATPase (V-ATPase) is one of the key factors mediating killing 25-27, resembling the mechanisms present in amoeba that use phagocytosis as an eating mechanism 28. In these cells activation of acidic proteases is thought to play a key role. In contrast, neutrophil killing relies more on ROS as well as HOCl produced by myeloperoxidase (MPO)11, and the pH remains neutral or alkaline during the first 30 min acidifying only later 29,30. Neutral pH has been suggested to favor the activity of oxidative proteases such as certain cathepsins. In DCs phagosomal pH is controversial, with some reporting acidification and others neutral or alkaline pH 31,32, but ROS and pH may profoundly influence the ability of these cells to present antigens to T cells, one of their main functions 33. 
Importantly, hormones, chemokines and cytokines may produce signaling events that induce maturation and changes in phagocyte behavior, and in turn influence phagosomal pH 34,35. Similarly, drugs, for example the antimalarial chloroquine, which is also considered for anti-cancer therapies 36, may affect phagosomal pH and therefore immune outcomes. Thus, a variety of cell biologists, immunologists, microbiologists and drug developers may be interested in measuring phagosomal pH when seeking to understand the mechanisms underlying the effects of a particular genetic disruption, bioactive compound or microorganism on innate and adaptive immune responses. 
Here we describe a method for measuring phagosomal pH in neutrophils that allowed us to show the importance of the HVCN1 channel in regulating neutrophil phagosomal pH 19. The method is based on the ratiometric property of fluorescein isothiocyanate (FITC) whose fluorescence emission at 535 nm is pH sensitive when excited at 490 nm but not 440 nm 37. When this dye is chemically coupled to a target, in this case zymosan, it can be followed using wide-field fluorescence microscopy, where cells are imaged as they phagocytose, and phagosomal pH changes are measured in real time as the phagosome matures. The actual pH is then gleaned by performing a calibration experiment where cells that have phagocytosed are exposed to solutions of different pH that contain the ionophores nigericin and monensin, that allow the rapid equilibration of the pH within phagosomes with the external solution. Ratio values are then compared to the known pH of solutions, a calibration curve is constructed by nonlinear regression and the resulting equation used to calculate pH from the ratio value.

<table>
	<tbody>
		<tr>
			<td>Zymosan A powder</td>
			<td>Sigma-Aldrich</td>
			<td>Z4250</td>
			<td>Various providers exist</td>
		</tr>
		<tr>
			<td>Fluorescein isothiocyanate</td>
			<td>Sigma-Aldrich</td>
			<td>F7250</td>
			<td>Various providers exist</td>
		</tr>
		<tr>
			<td>Anti-zymosan antibody (Zymosan A Bioparticles opsonizing reagent)</td>
			<td>Life Technologies</td>
			<td>Z2850</td>
			<td>Sigma-Aldrich O6637 is an equivalent product. Alternatively 25% serum can be used as an opsonizing reagent.</td>
		</tr>
		<tr>
			<td>4-Aminobenzoic hydrazide (4-ABH)</td>
			<td>Santa Cruz</td>
			<td>sc-204107</td>
			<td>Toxic, use gloves, various providers exist</td>
		</tr>
		<tr>
			<td>Diphenyleneiodonium chloride (DPI)</td>
			<td>Sigma-Aldrich</td>
			<td>D2926</td>
			<td>Toxic, use gloves, various providers exist</td>
		</tr>
		<tr>
			<td>Concanamycin A (ConcA)</td>
			<td>Sigma-Aldrich</td>
			<td>27689</td>
			<td>Toxic, use gloves, various providers exist</td>
		</tr>
		<tr>
			<td>Nigericin</td>
			<td>Sigma-Aldrich</td>
			<td>N7143</td>
			<td>Toxic, use gloves, various providers exist</td>
		</tr>
		<tr>
			<td>Monensin</td>
			<td>Enzo</td>
			<td>ALX-380-026-G001</td>
			<td>Toxic, use gloves, various providers exist</td>
		</tr>
		<tr>
			<td>Phosphate buffered saline (PBS)</td>
			<td>Life Technologies</td>
			<td>14200-075</td>
			<td>Various providers exist</td>
		</tr>
		<tr>
			<td>Hank&#39;s balance salt solution</td>
			<td>Life Technologies</td>
			<td>14025092</td>
			<td>Ringer&#39;s balanced salt solution or other clear physiological buffers may be substituted.</td>
		</tr>
		<tr>
			<td>Sodium carbonate (Na2CO3)</td>
			<td>Sigma-Aldrich</td>
			<td>S7795</td>
			<td>Various providers exist</td>
		</tr>
		<tr>
			<td>2-(N-Morpholino)ethanesulfonic acid (MES)</td>
			<td>Sigma-Aldrich</td>
			<td>M3671&#160;</td>
			<td>Various providers exist</td>
		</tr>
		<tr>
			<td>4-(2-Hydroxyethyl)piperazine-1-ethanesulfonic acid (HEPES)</td>
			<td>Sigma-Aldrich</td>
			<td>H3375</td>
			<td>Various providers exist</td>
		</tr>
		<tr>
			<td>N-Methyl-D-glucamine (NMDG)</td>
			<td>Sigma-Aldrich</td>
			<td>M2004&#160;</td>
			<td>Various providers exist</td>
		</tr>
		<tr>
			<td>Ethylene glycol-bis(2-aminoethylether)-N,N,N&#8242;,N&#8242;-tetraacetic acid (EGTA)</td>
			<td>Sigma-Aldrich</td>
			<td>3777</td>
			<td>Various providers exist</td>
		</tr>
		<tr>
			<td>&#160;Tris(hydroxymethyl)aminomethane (Tris)</td>
			<td>Sigma-Aldrich</td>
			<td>T1503&#160;</td>
			<td>Various providers exist</td>
		</tr>
		<tr>
			<td>Potassium chloride (KCl)</td>
			<td>Sigma-Aldrich</td>
			<td>P9333</td>
			<td>Various providers exist</td>
		</tr>
		<tr>
			<td>Sodium chloride (NaCl)</td>
			<td>Sigma-Aldrich</td>
			<td>S7653</td>
			<td>Various providers exist</td>
		</tr>
		<tr>
			<td>Magnesium chloride (MgCl2)</td>
			<td>Sigma-Aldrich</td>
			<td>M8266</td>
			<td>Various providers exist</td>
		</tr>
		<tr>
			<td>Absolute Ethanol (EtOH)</td>
			<td>Sigma-Aldrich</td>
			<td>2860</td>
			<td>Various providers exist</td>
		</tr>
		<tr>
			<td>Glass-bottom 35 mm petri dishes (Fluorodish)</td>
			<td>World Precision Instruments</td>
			<td>FD35-100</td>
			<td>Ibidi &#181;-clear dishes or coverslips with appropriate imaging chambers may be sustituted</td>
		</tr>
		<tr>
			<td>Sonicating water bath</td>
			<td>O. Kleiner AG</td>
			<td></td>
			<td>A sonicator may be used instead, various instrument providers exist</td>
		</tr>
		<tr>
			<td>Heamocytometer</td>
			<td>Marienfeld GmbH</td>
			<td></td>
			<td>Various instrument providers exist</td>
		</tr>
		<tr>
			<td>Widefield live imaging microscope</td>
			<td>Carl Zeiss AG</td>
			<td></td>
			<td>Various instrument providers exist, but the microscope must be able to image 440/535 and 490/535 excitation/emission respective. Spinning disk confocal set-ups with brightfield capabilities may substituted, but zymosan tend to go out of focus more often.&#160;&#160;</td>
		</tr>
		<tr>
			<td>Peristaltic pump (Dynamax RP-1)</td>
			<td>Rainin</td>
			<td></td>
			<td>Various instrument providers exist</td>
		</tr>
		<tr>
			<td>pH meter</td>
			<td>Schott Gerate GmbH</td>
			<td></td>
			<td>Various instrument providers exist</td>
		</tr>
		<tr>
			<td>Manual Counter</td>
			<td>Milian SA</td>
			<td></td>
			<td>Various instrument providers exist</td>
		</tr>
	</tbody>
</table>

measuring phagosome ph by ratiometric fluorescence microscopy

Phagozytose ist ein grundlegender Prozess, durch den angeborenen Immunzellen zu verschlingen Bakterien, apoptotischen Zellen oder andere Fremdkörper, um zu töten oder zu neutralisieren, die verschluckt Material oder um sie als Antigene zu präsentieren und zu initiieren adaptiven Immunantwort. Der pH der Phagosomen ist ein kritischer Parameter zur Regelung Spaltung oder Fusion mit Endomembranen und Aktivierung der proteolytischen Enzyme, Ereignisse, die phagozytischen Vakuolen in eine abbau Organell ausreifen. Zusätzlich wird die Translokation von H + zur Herstellung hoher Konzentrationen von reaktiven Sauerstoffspezies (ROS), die für eine effiziente Töten und Signalisierung zu anderen Wirtsgeweben erforderlich. Viele intrazelluläre Pathogene zu untergraben phagocytic Tötung durch Begrenzung phagosomalen Versauerung, der die Bedeutung der pH-Wert im Phagosom Biologie. Hier beschreiben wir eine ratiometrische Verfahren zur Messung phagosomalen pH in Neutrophilen mit Fluoresceinisothiocyanat (FITC) -markiertem Zymosan als phagozytischen targets, und Live-Cell-Imaging. Der Test basiert auf der Fluoreszenzeigenschaften von FITC, die durch saure pH abgeschreckt wird, wenn bei 490 nm angeregt wird, aber nicht, wenn sie bei 440 nm angeregt wird, so dass die Quantifizierung von einer pH-abhängigen Verhältnis statt der absoluten Fluoreszenz eines einzelnen Farbstoffs. Ein detailliertes Protokoll zur Durchführung einer in situ-Farbstoff Kalibrierung und Umwandlung des Verhältnisses realen pH-Werten ist ebenfalls vorgesehen. Single-Farbstoff ratiometrische Verfahren werden im Allgemeinen als überlegen einzigen Wellenlänge oder Dual-Farbstoff pseudo-ratiometrische Protokolle, da sie weniger empfindlich auf Störungen, wie beispielsweise Bleich sind, konzentrieren sich ändert, Laser-Variationen und unebene Kennzeichnung, die das Messsignal verfälschen. Dieses Verfahren kann leicht modifiziert werden, um in anderen pH phagozytischen Zelltypen zu messen und Zymosan durch jede andere aminhaltige Teilchen ersetzt werden, von inerten Kügelchen zu lebenden Mikroorganismen. Schließlich kann dieses Verfahren angepaßt werden, um die Verwendung von anderen fluoreszierenden Sonden empfindlich auf unterschiedliche pH-Bereiche oder andere phagosom machenal-Aktivitäten, so dass es eine allgemeine Protokoll für die funktionelle Bildgebung des Phagosomen.

Die folgenden sind repräsentative Ergebnisse für ein Experiment, wo die phagosomalen pH-Wert der primären Maus Neutrophile aus dem Knochenmark von Wildtyp oder isoliert Hvcn1 - / - Mäuse wurden verglichen. Für ein erfolgreiches Experiment ist es wichtig, genug Phagosomen im Sichtfeld während der gesamten Dauer des Zeitraffer-Film zu erhalten, bei gleichzeitiger Vermeidung zu viele Phagosomen, die später sein wird schwieriger Segment während der Bildanalyse. 1 schema</strong...

Watch this Scientific Journal Video about Measuring Phagosome pH by Ratiometric Fluorescence Microscopy at JoVE.com

Measuring Phagosome pH by Ratiometric Fluorescence Microscopy

Phagosomal pH influences phagosome maturation, oxidant production, phagosomal killing as well as antigen presentation. Here we describe a ratiometric method for measuring time-course and endpoint pH changes in individual phagosomes in living phagocytes using fluorescence microscopy.

Mess Phagosomen pH durch ratiometrische Fluoreszenzmikroskopie

Phagocytosis is a fundamental process through which innate immune cells engulf bacteria, apoptotic cells or other foreign particles in order to kill or ...

measuring-phagosome-ph-by-ratiometric-fluorescence-microscopy

Research

JoVE Journal

Immunology and Infection

13.9K Aufrufe.  University of Geneva. Phagosomal pH influences phagosome maturation, oxidant production, phagosomal killing as well as antigen presentation. Here we describe a ratiometric method for measuring time-course and endpoint pH changes in individual phagosomes in living phagocytes using fluorescence microscopy. 

Serie: Measuring Phagosome pH by Ratiometric Fluorescence Microscopy

Microwave Assisted Rapid Diagnosis of Plant Virus Diseases by Transmission Electron Microscopy

Investigations of ultrastructural changes induced by viruses are often necessary to clearly identify viral diseases in plants. With conventional sample preparation for transmission electron microscopy (TEM) such investigations can take several days1,2 and are therefore not suited for a rapid diagnosis of plant virus diseases. Microwave fixation can be used to drastically reduce sample preparation time for TEM investigations with similar ultrastructural results as observed after conventionally sample preparation3-5. Many different custom made microwave devices are currently available which can be used for the successful fixation and embedding of biological samples for TEM investigations5-8. In this study we demonstrate on Tobacco Mosaic Virus (TMV) infected Nicotiana tabacum plants that it is possible to diagnose ultrastructural alterations in leaves in about half a day by using microwave assisted sample preparation for TEM. We have chosen to perform this study with a commercially available microwave device as it performs sample preparation almost fully automatically5 in contrast to the other available devices where many steps still have to be performed manually6-8 and are therefore more time and labor consuming. As sample preparation is performed fully automatically negative staining of viral particles in the sap of the remaining TMV-infected leaves and the following examination of ultrastructure and size can be performed during fixation and embedding.

This study describes a method that allows the rapid and clear diagnosis of plant virus diseases in about half a day by using a combination of microwave assisted plant sample preparation for transmission electron microscopy and negative staining methods.

Mikrowelle Assisted Schnelle Diagnose von Plant Virus Erkrankungen durch Transmission Electron Microscopy

Investigations of ultrastructural changes induced by viruses are often necessary to clearly identify viral diseases in plants. With conventional sample ...

Forschung

Immunologie und Infektion

Visualization of Bacterial Toxin Induced Responses Using Live Cell Fluorescence Microscopy

Bacterial toxins bind to cholesterol in membranes, forming pores that allow for leakage of cellular contents and influx of materials from the external environment. The cell can either recover from this insult, which requires active membrane repair processes, or else die depending on the amount of toxin exposure and cell type1. In addition, these toxins induce strong inflammatory responses in infected hosts through activation of immune cells, including macrophages, which produce an array of pro-inflammatory cytokines2. Many Gram positive bacteria produce cholesterol binding toxins which have been shown to contribute to their virulence through largely uncharacterized mechanisms.
Morphologic changes in the plasma membrane of cells exposed to these toxins include their sequestration into cholesterol-enriched surface protrusions, which can be shed into the extracellular space, suggesting an intrinsic cellular defense mechanism3,4. This process occurs on all cells in the absence of metabolic activity, and can be visualized using EM after chemical fixation4. In immune cells such as macrophages that mediate inflammation in response to toxin exposure, induced membrane vesicles are suggested to contain cytokines of the IL-1 family and may be responsible both for shedding toxin and disseminating these pro-inflammatory cytokines5,6,7. A link between IL-1&beta; release and a specific type of cell death, termed pyroptosis has been suggested, as both are caspase-1 dependent processes8. To sort out the complexities of this macrophage response, which includes toxin binding, shedding of membrane vesicles, cytokine release, and potentially cell death, we have developed labeling techniques and fluorescence microscopy methods that allow for real time visualization of toxin-cell interactions, including measurements of dysfunction and death (Figure 1). Use of live cell imaging is necessary due to limitations in other techniques. Biochemical approaches cannot resolve effects occurring in individual cells, while flow cytometry does not offer high resolution, real-time visualization of individual cells. The methods described here can be applied to kinetic analysis of responses induced by other stimuli involving complex phenotypic changes in cells.

Methods for purifying the cholesterol binding toxin streptolysin O from recombinant E. coli and visualization of toxin binding to live eukaryotic cells are described. Localized delivery of toxin induces rapid and complex changes in targeted cells revealing novel aspects of toxin biology.

Visualisierung der bakteriellen Toxin induzierten Reaktionen mit Live Cell Fluoreszenzmikroskopie

Bacterial toxins bind to cholesterol in membranes, forming pores that allow for leakage of cellular contents and influx of materials from the external ...

Study of Phagolysosome Biogenesis in Live Macrophages

Phagocytic cells play a major role in the innate immune system by removing and eliminating invading microorganisms in their phagosomes. Phagosome maturation is the complex and tightly regulated process during which a nascent phagosome undergoes drastic transformation through well-orchestrated interactions with various cellular organelles and compartments in the cytoplasm. This process, which is essential for the physiological function of phagocytic cells by endowing phagosomes with their lytic and bactericidal properties, culminates in fusion of phagosomes with lysosomes and biogenesis of phagolysosomes which is considered to be the last and critical stage of maturation for phagosomes. In this report, we describe a live cell imaging based method for qualitative and quantitative analysis of the dynamic process of lysosome to phagosome content delivery, which is a hallmark of phagolysosome biogenesis. This approach uses IgG-coated microbeads as a model for phagocytosis and fluorophore-conjugated dextran molecules as a luminal lysosomal cargo probe, in order to follow the dynamic delivery of lysosmal content to the phagosomes in real time in live macrophages using time-lapse imaging and confocal laser scanning microscopy. Here we describe in detail the background, the preparation steps and the step-by-step experimental setup to enable easy and precise deployment of this method in other labs. Our described method is simple, robust, and most importantly, can be easily adapted to study phagosomal interactions and maturation in different systems and under various experimental settings such as use of various phagocytic cells types, loss-of-function experiments, different probes, and phagocytic particles.

Studium der Biogenese Phagolysosom im Live-Makrophagen

Phagocytic cells play a major role in the innate immune system by removing and eliminating invading microorganisms in their phagosomes. Phagosome ...

Measuring Physiological Responses of Drosophila Sensory Neurons to Lipid Pheromones Using Live Calcium Imaging

Unlike mammals, insects such as Drosophila have multiple taste organs. The chemosensory neurons on the legs, proboscis, wings and ovipositor of Drosophila express gustatory receptors1,2, ion channels3-6, and ionotropic receptors7 that are involved in the detection of volatile and non-volatile sensory cues. These neurons directly contact tastants such as food, noxious substances and pheromones and therefore influence many complex behaviors such as feeding, egg-laying and mating. Electrode recordings and calcium imaging have been widely used in insects to quantify the neuronal responses evoked by these tastants. However, electrophysiology requires specialized equipment and obtaining measurements from a single taste sensillum can be technically challenging depending on the cell-type, size, and position. In addition, single neuron resolution in Drosophila can be difficult to achieve since taste sensilla house more than one type of chemosensory neuron. The live calcium imaging method described here allows responses of single gustatory neurons in live flies to be measured. This method is especially suitable for imaging neuronal responses to lipid pheromones and other ligand types that have low solubility in water-based solvents.

Measuring Physiological Responses of Drosophila Sensory Neurons to Lipid Pheromones Using Live Calcium Imaging

The forelegs and proboscis of Drosophila contain a rich repertoire of gustatory sensory neurons. Here, we present a method using calcium imaging to measure physiological responses from sensory neurons in the foreleg and proboscis of live flies upon exogenous application of a gustatory pheromone.

Mess physiologischen Reaktionen von<em&gt; Drosophila</emNeurone&gt; Sensory zu Lipid Pheromone Verwendung von Live-Calcium Imaging

Unlike mammals, insects such as Drosophila have multiple taste organs. The chemosensory neurons on the legs, proboscis, wings and ovipositor of Drosophila ...

Ratiometric Imaging of Extracellular pH in Dental Biofilms

The pH in bacterial biofilms on teeth is of central importance for dental caries, a disease with a high worldwide prevalence. Nutrients and metabolites are not distributed evenly in dental biofilms. A complex interplay of sorption to and reaction with organic matter in the biofilm reduces the diffusion paths of solutes and creates steep gradients of reactive molecules, including organic acids, across the biofilm. Quantitative fluorescent microscopic methods, such as fluorescence life time imaging or pH ratiometry, can be employed to visualize pH in different microenvironments of dental biofilms. pH ratiometry exploits a pH-dependent shift in the fluorescent emission of pH-sensitive dyes. Calculation of the emission ratio at two different wavelengths allows determining local pH in microscopic images, irrespective of the concentration of the dye. Contrary to microelectrodes the technique allows monitoring both vertical and horizontal pH gradients in real-time without mechanically disturbing the biofilm. However, care must be taken to differentiate accurately between extra- and intracellular compartments of the biofilm. Here, the ratiometric dye, seminaphthorhodafluor-4F 5-(and-6) carboxylic acid (C-SNARF-4) is employed to monitor extracellular pH in in vivo grown dental biofilms of unknown species composition. Upon exposure to glucose the dye is up-concentrated inside all bacterial cells in the biofilms; it is thus used both as a universal bacterial stain and as a marker of extracellular pH. After confocal microscopic image acquisition, the bacterial biomass is removed from all pictures using digital image analysis software, which permits to exclusively calculate extracellular pH. pH ratiometry with the ratiometric dye is well-suited to study extracellular pH in thin biofilms of up to 75 &#181;m thickness, but is limited to the pH range between 4.5 and 7.0.

A pH-sensitive ratiometric dye is used in combination with confocal laser scanning microscopy and digital image analysis to monitor extracellular pH in dental biofilms in real-time.

Ratiometrisch Imaging von extrazellulären pH in Dental Biofilme

The pH in bacterial biofilms on teeth is of central importance for dental caries, a disease with a high worldwide prevalence. Nutrients and metabolites ...

"Phagosome Closure Assay" to Visualize Phagosome Formation in Three Dimensions Using Total Internal Reflection Fluorescent Microscopy (TIRFM)

Phagocytosis is a mechanism used by specialized cells to internalize and eliminate microorganisms or cellular debris. It relies on profound rearrangements of the actin cytoskeleton that is the driving force for plasma membrane extension around the particle. In addition, efficient engulfment of large material relies on focal exocytosis of intracellular compartments. This process is highly dynamic and numerous molecular players have been described to have a role during phagocytic cup formation. The precise regulation in time and space of all of these molecules, however, remains elusive. In addition, the last step of phagosome closure has been very difficult to observe because inhibition by RNA interference or dominant negative mutants often results in stalled phagocytic cup formation. 
We have set up a dedicated experimental approach using total internal reflection fluorescence microscopy (TIRFM) combined with epifluorescence to monitor step by step the extension of pseudopods and their tips in a phagosome growing around a particle loosely bound to a coverslip. This method allows us to observe, with high resolution the very tips of the pseudopods and their fusion during closure of the phagosome in living cells for two different fluorescently tagged proteins at the same time.

"Phagosome Closure Assay" to Visualize Phagosome Formation in Three Dimensions Using Total Internal Reflection Fluorescent Microscopy TIRFM

We describe an experimental setup to visualize with unprecedented high resolution phagosome formation and closure in three dimensions in living macrophages, using total internal reflection fluorescence microscopy. It allows monitoring of the base of the phagocytic cup, the extending pseudopods, as well as the precise site of phagosome scission.

&quot;Phagosomen Closure Assay&quot; zu visualisieren Phagosomen Formation in drei Dimensionen Mit Total Internal Reflection Fluoreszenz-Mikroskopie (TIRFM)

Phagocytosis is a mechanism used by specialized cells to internalize and eliminate microorganisms or cellular debris. It relies on profound rearrangements ...

Imaging the Neutrophil Phagosome and Cytoplasm Using a Ratiometric pH Indicator

Neutrophils are crucial to host innate defense and, consequently, constitute an important area of medical research. The phagosome, the intracellular compartment where the killing and digestion of engulfed particles take place, is the main arena for neutrophil pathogen killing that requires tight regulation. Phagosomal pH is one aspect that is carefully controlled, in turn regulating antimicrobial protease activity. Many fluorescent pH-sensitive dyes have been used to visualize the phagosomal environment. S-1 has several advantages over other pH-sensitive dyes, including its dual emission spectra, its resistance to photo-bleaching, and its high pKa. Using this method, we have demonstrated that the neutrophil phagosome is unusually alkaline in comparison to other phagocytes. By using different biochemical conjugations of the dye, the phagosome can be delineated from the cytoplasm so that changes in the size and shape of the phagosome can be assessed. This allows for further monitoring of ionic movement.

This manuscript describes a simple method to measure the phagosomal pH and area as well as the cytoplasmic pH of human and mouse neutrophils using the ratiometric indicator seminaphthorhodafluor (SNARF)-1, or S-1. This is achieved using live-cell confocal fluorescence microscopy and image analysis.

Abbilden der Neutrophilen Phagosomen und Zytoplasma Mit einem Ratiometrisch pH-Indikator

Neutrophils are crucial to host innate defense and, consequently, constitute an important area of medical research. The phagosome, the intracellular ...

Isolation, Characterization, and Purification of Macrophages from Tissues Affected by Obesity-related Inflammation

Obesity promotes a chronic inflammatory state that is largely mediated by tissue-resident macrophages as well as monocyte-derived macrophages. Diet-induced obesity (DIO) is a valuable model in studying the role of macrophage heterogeneity; however, adequate macrophage isolations are difficult to acquire from inflamed tissues. In this protocol, we outline the isolation steps and necessary troubleshooting guidelines derived from our studies for obtaining a suitable population of tissue-resident macrophages from mice following 18 weeks of high-fat (HFD) or high-fat/high-cholesterol (HFHCD) diet intervention. This protocol focuses on three hallmark tissues studied in obesity and atherosclerosis including the liver, white adipose tissues (WAT), and the aorta. We highlight how dualistic usage of flow cytometry can achieve a new dimension of isolation and characterization of tissue-resident macrophages. A fundamental section of this protocol addresses the intricacies underlying tissue-specific enzymatic digestions and macrophage isolation, and subsequent cell-surface antibody staining for flow cytometric analysis. This protocol addresses existing complexities underlying fluorescent-activated cell sorting (FACS) and presents clarifications to these complexities so as to obtain broad range characterization from adequately sorted cell populations. Alternate enrichment methods are included for sorting cells, such as the dense liver, allowing for flexibility and time management when working with FACS. In brief, this protocol aids the researcher to evaluate macrophage heterogeneity from a multitude of inflamed tissues in a given study and provides insightful troubleshooting tips that have been successful for favorable cellular isolation and characterization of immune cells in DIO-mediated inflammation.

This protocol allows a researcher to isolate and characterize tissue-resident macrophages in various hallmark inflamed tissues extracted from diet-induced models of metabolic disorders.

Isolierung, Charakterisierung und Reinigung der Makrophagen aus den Geweben von Fettleibigkeit bedingte Entzündung betroffen

Obesity promotes a chronic inflammatory state that is largely mediated by tissue-resident macrophages as well as monocyte-derived macrophages. ...

Visualizing Intracellular SNARE Trafficking by Fluorescence Lifetime Imaging Microscopy

Soluble N-ethylmaleimide sensitive fusion protein (NSF) attachment protein receptor (SNARE) proteins are key for membrane trafficking, as they catalyze membrane fusion within eukaryotic cells. The SNARE protein family consists of about 36 different members. Specific intracellular transport routes are catalyzed by specific sets of 3 or 4 SNARE proteins that thereby contribute to the specificity and fidelity of membrane trafficking. However, studying the precise function of SNARE proteins is technically challenging, because SNAREs are highly abundant and functionally redundant, with most SNAREs having multiple and overlapping functions. In this protocol, a new method for the visualization of SNARE complex formation in live cells is described. This method is based on expressing SNARE proteins C-terminally fused to fluorescent proteins and measuring their interaction by F&#246;rster resonance energy transfer (FRET) employing fluorescence lifetime imaging microscopy (FLIM). By fitting the fluorescence lifetime histograms with a multicomponent decay model, FRET-FLIM allows (semi-)quantitative estimation of the fraction of the SNARE complex formation at different vesicles. This protocol has been successfully applied to visualize SNARE complex formation at the plasma membrane and at endosomal compartments in mammalian cell lines and primary immune cells, and can be readily extended to study SNARE functions at other organelles in animal, plant, and fungal cells.

This protocol describes a new method allowing for the quantitative visualization of complex formation of SNARE proteins, based on F&#246;rster resonance energy transfer, and fluorescence lifetime imaging microscopy.

Visualisierung von intrazellulären SNARE Menschenhandel durch Fluoreszenz Lifetime Imaging Microscopy

Soluble N-ethylmaleimide sensitive fusion protein (NSF) attachment protein receptor (SNARE) proteins are key for membrane trafficking, as they catalyze ...

In Vitro Canine Neutrophil Extracellular Trap Formation: Dynamic and Quantitative Analysis by Fluorescence Microscopy

In response to invading pathogens, neutrophils release neutrophil extracellular traps (NETs), which are extracellular networks of DNA decorated with histones and antimicrobial proteins. Excessive NET formation (NETosis) and citH3 release during sepsis is associated with multiple organ dysfunction and mortality in mice and humans but its implications in dogs are unknown. Herein, we describe a technique to isolate canine neutrophils from whole blood for observation and quantification of NETosis. Leukocyte-rich plasma, generated by dextran sedimentation, is separated by commercially available density gradient separation media and granulocytes collected for cell count and viability testing. To observe real-time NETosis in live neutrophils, cell permeant and cell impermeant fluorescent nucleic acid stains are added to neutrophils activated either by lipopolysaccharide (LPS) or phorbol 12-myristate 13-acetate (PMA). Changes in nuclear morphology and NET formation are observed over time by fluorescence microscopy. In vitro NETosis is further characterized by co-colocalization of cell-free DNA (cfDNA), myeloperoxidase (MPO) and citrullinated histone H3 (citH3) using a modified double-immunolabelling protocol. To objectively quantify NET formation and citH3 expression using fluorescence microscopy, NETs and citH3-positive cells are quantified in a blinded manner using available software. This technique is a specific assay to evaluate the in vitro capacity of canine neutrophils to undergo NETosis.

In Vitro Canine Neutrophil Extracellular Trap Formation: Dynamic and Quantitative Analysis by Fluorescence Microscopy

We describe methods to isolate canine neutrophils from whole blood and visualize NET formation in live neutrophils using fluorescence microscopy. Also described are protocols to quantify NET formation and citrullinated histone H3 (citH3) expression using immunofluorescence microscopy.

In-vitro- Eckzahn Neutrophilenzahl extrazelluläre Trap Bildung: Dynamische und Quantitative Analyse von Fluoreszenz-Mikroskopie

In response to invading pathogens, neutrophils release neutrophil extracellular traps (NETs), which are extracellular networks of DNA decorated with ...