Cotransfection of HeLa Cells with the Reporter and U1 Small Nuclear RNA (snRNA) Plasmids
2:00
32P-Labeling of Oligonucleotides
2:52
Analysis of the Spliced Reporter Transcripts by Primer Extension
3:53
Analysis of the Spliced Reporter Transcripts by Fluorescent RT-PCR
5:08
Analysis of Variant U1 snRNA Expression by RT-qPCR
5:38
Setup and Running of Urea-PAGE Gels
6:27
Results: Reporter Based Splicing Efficiency of U1 snRNA Constructs
8:09
Conclusion
Transkript
This protocol describes a cellular Assay for Monitoring Splicing Efficiency, using a adaptable managing reporter. This reporter Assay can be used to study the effects of disease Associated mutations in the Exxon or splice sites, and to design ther
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This protocol describes a minigene reporter assay to monitor the impact of 5´-splice site mutations on splicing and develops suppressor U1 snRNA for the rescue of mutation-induced splicing inhibition. The reporter and suppressor U1 snRNA constructs are expressed in HeLa cells, and splicing is analyzed by primer extension or RT-PCR.