The authors acknowledge Dr. Gerald Hunsberger of GlaxoSmithKline Pharmaceuticals, King of Prussia, PA, USA, and Galvani Bioelectronics (Stevenage, UK) for sharing their original nerve preparation technique with us. The authors acknowledge Robert Toth for the Dual-Chamber nerve bath design. The authors acknowledge funding from the Healthcare Technologies Challenge Awards (HTCA) grant of the Engineering and Physical Sciences Research Council (EPSRC). The authors acknowledge the High Performance Embedded and Distributed Systems Centre for Doctoral Training (HiPEDS CDT) of Imperial College London for funding Adrien Rapeaux (EP/L016796/1 ). Adrien Rapeaux is currently funded by the UK Dementia Research Institute, Care Research and Technology Centre.&#160;The authors gratefully acknowledge Zack Bailey of Imperial College, in the Department of Bioengineering, for help with experiments and access to animal tissues during the production of the JoVE video article.

All animal care and procedures were performed under appropriate licenses issued by the UK Home office under the Animals (Scientific Procedures) Act (1986) and were approved by the Animal Welfare and Ethical Review Board of Imperial College London.
1. Preparation of buffers
NOTE: This part of the protocol can be carried out well in advance of the rest of the protocol, except for the final steps involving the preparation of modified Krebs-Henseleit Buffer (mKHB) at 1x concentration.
<ol>
	<li>Prepare 1 M CaCl2 stock solution
	<ol>
		<li>Add 14.701 g of CaCl2 dihydrate to a clean 100 mL beaker. Add ~75 mL of deionized water and stir until complete dissolution of the salt.</li>
		<li>Transfer the solution to a 100 mL graduated flask and add deionized water until 100 mL volume has been reached. Transfer the solution to a bottle and store it in a refrigerator at 4 &#176;C.</li>
	</ol>
	</li>
	<li>Prepare 10x concentrated mKHB stock
	<ol>
		<li>Add 66.03 g of sodium chloride (NaCl), 3.57 g of potassium chloride (KCl), 1.63 g of potassium dihydrogen phosphate (KH2PO4), and 1.44 g of magnesium sulfate to a 2 L beaker.</li>
		<li>Add ~750 mL of deionized water to the beaker and stir until the salts have dissolved (there may be small salt crystals left at the bottom). Add 25 mL of 1 M CaCl2 stock solution (step 1.1) and stir; ensure this is the last salt added.</li>
		<li>Transfer the solution to a 1 L graduated flask and add deionized water to reach a total volume of 1 L. Transfer the solution to a 1 L bottle. Store concentrated 10x mKHB at 4 &#176;C in a refrigerator. 
		NOTE: Concentrated mKHB stock can be stored for approximately 1 month before replacement.</li>
	</ol>
	</li>
	<li>Prepare dissection Petri dish (coating)
	<ol>
		<li>Prepare a clean glass Petri dish (120 mm diameter) for coating by washing and drying the dish carefully.</li>
		<li>Following the manufacturer&#39;s instructions for usage and curing of the conformal alkoxy coating, coat the bottom of the Petri Dish with ~3-5 mm of coating by carefully pouring the conformal coating mixture into the dish until the desired thickness has been reached.</li>
		<li>Cure the coating in an oven at 60 &#176;C until it is firm to the touch. The dissection Petri dish is now ready. 
		&#8203;NOTE: Gentle cleaning of the dish after each use will ensure that the coating lasts for years before replacement is needed. When replacing the coating, ensure to remove all the coating material before applying a new coating. Note that the conformal alkoxy coating (Table of Materials) used in this protocol has a shelf life shorter than a year.</li>
	</ol>
	</li>
</ol>
2. Pre-dissection preparations
NOTE: This step starts the experiment. The below steps must be carried out on the same day, in this order.
<ol>
	<li>Prepare 1x mKHB
	<ol>
		<li>Prepare a clean 2 L beaker for the buffer. Transfer 200 mL of 10x mKHB stock to the 2 L beaker. Add 2.1 g of sodium carbonate (NaHCO3) and 0.99 g of anhydrous Dextrose (D-glucose) to the 2 L beaker.</li>
		<li>Add approximately 1 L of deionized water to the beaker. Stir until salts have been completely dissolved. Transfer the solution to a 2 L graduated flask and add deionized water to reach a total volume of 2 L.</li>
		<li>Transfer the solution to a 2 L glass bottle placed on a heating stirrer with the temperature set to 37 &#176;C. 
		NOTE: Smaller heating stirrer will often be unable to reach the target 37 &#176;C temperature due to the thermal inertia of large containers full of water. Adjust the temperature upward so the contents of the bottle reach 37 &#176;C with stirring. Monitor the temperature during the experiment and lower the set temperature in the event of overshoot.</li>
		<li>Place a thermometer in the 2 L bottle to monitor the temperature, using grippers to prevent the thermometer from being impacted by the stirring flea. Aerate the buffer with carbogen for a minimum of 30 min to oxygenate the solution. This should set the pH to 7.4. Measure the pH with a pH meter to ensure it is within 0.1 pH units of 7.4 (at 37 &#176;C). 
		NOTE: To adjust the pH to 7.4, use hydrochloric acid or sodium hydroxide when needed.</li>
		<li>Fill two 15 mL centrifuge tubes and one 100 mL bottle with mKHB and place them on ice to cool. 
		NOTE: The centrifuge tubes and the bottle can be cleaned and reused after each experiment without autoclaving.</li>
		<li>For later parts of the experiment, continue to aerate the buffer in the 2 L bottle with carbogen at 37 &#176;C with continuous stirring. 
		NOTE: Unsupervised use of carbogen may be dangerous if no automatic systems are in place to shut off gas flow in the event of a leak. An automated sensor and electronic shutoff valve can mitigate this; otherwise, a person must be left to supervise the equipment if dissection takes place in a different room. In all cases, an oxygen sensor should be used near the setup to warn operators when ambient oxygen concentration rises above 25%. Use a room with active ventilation if possible.</li>
	</ol>
	</li>
	<li>Turn on the signal acquisition device, low-noise preamplifier, line noise filter, and oscilloscope for recording and stimulation, to allow enough time for temperature stabilization.</li>
	<li>Ensure all electrical recording equipment is correctly configured
	<ol>
		<li>Set the low-noise preamplifier to AC-coupled input with the input band-pass filter set to 6 dB roll-off per decade, and cutoff frequencies set to 30 Hz and 3 kHz for the high-pass and low-pass filters, respectively.</li>
		<li>Set the gain of the low-noise preamplifier to 100.</li>
	</ol>
	</li>
</ol>
3. Animal anesthesia and euthanization
NOTE: Female rats between 250 and 330 g (Table of Materials) were used for the studies.
<ol>
	<li>Prepare surgical tools and consumables: 12 cm straight scissors (blunt); 2 mm cutting edge angled spring scissors; 4 cm fine scissors, sharp or semi-sharp; #7 Dumont forceps; 45&#176; angled fine forceps and 6-0 suturing silk or thread.</li>
	<li>Place the rat in an anaesthetization container or chamber. Connect oxygen and the anesthetic diffuser to the container. Set anesthetic (isoflurane) concentration to 3.5% and wait approximately 10 min or until the animal shows signs of anesthesia such as loss of righting reflex.</li>
	<li>After the rat shows signs of anesthesia, confirm the loss of consciousness with a toe pinch withdrawal reflex test. Proceed only when there is no toe withdrawal; otherwise, check all the connections and anesthetic levels in the diffuser and repeat step 3.2.</li>
	<li>Take the animal out of the container and proceed with cervical dislocation, followed by incision of a femoral artery for confirmation of death.</li>
</ol>
4. Dissection protocol
NOTE: Place the animal with its belly down on the dissection table. Repeat the following steps for both legs. Typically, the right leg is dissected first.
<ol>
	<li>Holding the ankle firmly between the thumb, index finger, and middle finger, sever the calcaneal tendon using 12 cm straight blunt scissors.</li>
	<li>With fine sharp scissors, make a skin incision from the calcaneal tendon along the back of the leg all the way up to the base of the spine, taking care not to dissect the muscle tissue below.</li>
	<li>Using fine forceps and fine scissors, make careful incisions through the muscle layers near the middle of the back of the leg until the sciatic nerve is exposed. As soon as the sciatic nerve is visible, moisturize the cavity using ice-cold mKHB to prevent the nerve from drying out.</li>
	<li>Using hemostats, pull the flaps of skin on each side apart, and maintain the incision open for finer dissection work. Starting from the location of the calcaneal tendon incision, with fine scissors, interrupt the muscle on the medial side of the leg to free the nerve. Continue to maintain moisture levels in the area with ice-cold mKHB.</li>
	<li>As the nerve is exposed while moving up the leg, dissect the overlying muscle tissue. Free the nerve nearer to the spine from connective tissues until reaching the spinal cleft at which point there is a kink in the nerve. Do not attempt to clean the nerve yet as speed is essential at this stage.</li>
	<li>Sever the nerve as close to the spine as possible with fine scissors. To make the dissection easier, very gently pull the end of the nerve near the ankle using forceps. Never pinch the nerve in the middle, but only the ends. Never pull a nerve taut. 
	OPTIONAL: At this point, if time allows, suturing of both ends of the nerve can be carried out to help maintain viability. Keep handling to a minimum to prevent damage. If there is insufficient time (see step 4.5), skip this step and follow step 5.2 later on.</li>
	<li>Place the dissected nerve in the 15 mL centrifuge tube filled with mKHB (step 2.1.5), close the tube, and place the tube back on ice until the start of the cleaning procedure.</li>
	<li>Repeat steps 4.1-4.7 for the other leg. Ideally, each nerve should take 5-10 min to extract, in order to maximize tissue viability.</li>
</ol>
5. Nerve cleaning procedure
<ol>
	<li>Fill the coated Petri dish approximately halfway with chilled oxygenated mKHB. Place one of the dissected sciatic nerves in the dish and pin both ends of the nerve to the dish such that the nerve is straight without kinks, torsion, or twists. Pin the nerve as close to the ends as possible.</li>
	<li>Using 6-0 silk sutures or fine thread, tie a double knot around each end of the nerve to prevent cytosol leakage into the buffer. Place the knots just next to the insect pins on the side closer to the center of the nerve, as this will prevent leakage from nerve tissue into the buffer. Do not carry out this step if the nerve has been previously ligated.</li>
	<li>Using the microscope for precision and the 2 mm angled spring scissors, remove fat, blood vessels, and muscle tissue from the nerve. Prune any nerve branches that will not be used in the stimulation and recording protocol.
	<ol>
		<li>Every 5 min of cleaning, replace the buffer with fresh chilled oxygenated mKHB. Use fine forceps to pull on connective tissues, fat, and blood vessels to ease dissection.</li>
	</ol>
	</li>
	<li>Place the nerves back in the transport tubes filled with fresh oxygenated chilled mKHB and place the tubes on ice.</li>
</ol>
6. Equipment setup
NOTE: The equipment setup used to carry out experiments is illustrated in Figure 1. Briefly, it consists of a dual-compartment nerve bath, a 2 L bottle placed on a heating stirrer, a source of carbogen for buffer aeration, and tubing to allow the buffer to flow from the bottle to the bath, and back to the bottle using a peristaltic pump. The bath can be machined out of plexiglass or 3D-printed from watertight materials. It has a depth of approximately 2 cm, and the partition separating the two chambers of the bath features a 1.5 mm diameter hole to allow the threading of a peripheral nerve across both chambers. One chamber is large, must be at least 4 or 5 cm long, and will be filled with buffer. The other chamber should be at least 3 cm long and will be filled with silicone or mineral oil. The bath must not be made too large as this will degrade control of perfusion, temperature, and pH. Different bath sizes may be required depending on the size of the nerve tissue being studied.
<ol>
	<li>Prepare a clean dual-chamber nerve bath (see Supplementary File for design specifications). Place the nerve bath below the level of the 2 L bottle placed on the heating stirrer, using standard laboratory boss heads and grippers. Connect the drain of the bath to the peristaltic pump inlet.</li>
	<li>Connect the outlet of the peristaltic pump to a tube leading back to the 2 L buffer bottle. Connect the bath inlet to a tube with an adjustable flow valve and put the tube inside the 2 L bottle. Use a three-way valve with a syringe connected to the middle outlet to help with priming the tube as a siphon for gravity-assisted buffer inflow.</li>
	<li>Prime the siphon by drawing the syringe until buffer flows into it. Configure the valve such that the flow rate of buffer into the bath is ~5-6 mL&#183;min-1. The flow can be increased initially to fill the bath. Once the bath buffer level has reached the drain, place the nerves in the bath.</li>
	<li>Using an insect pin, secure the end of the nerve at the corner of the buffer-filled bath chamber. Using 45&#176; angled fine forceps and pinching the nerve only at the ends, carefully thread the nerve to be stimulated through the hole in the partition between the two bath chambers.</li>
	<li>Secure the other end of the nerve in the oil chamber of the bath with an insect pin, ensuring that the nerve is straight without being stretched and is free of kinks and twists. Using silicone grease, make a seal to prevent buffer leakage from the buffer chamber into the oil chamber. Fill the oil chamber with silicone or mineral oil.</li>
	<li>Place the Ag/AgCl recording electrode hooks in the oil bath chamber and secure them using boss heads and grippers. Drape the portion of the nerve in the oil bath over the hooks without pulling the nerve taut. Do not pinch the nerve; use angled forceps to lift the nerve without pinching.</li>
	<li>Adjust or repair the silicone grease seal if any leakage is observed after moving the nerve.</li>
	<li>Connect the reference Ag/AgCl electrode to the amplifier ground and place the electrode in the buffer-filled bath chamber by securing it using a laboratory gripper.</li>
</ol>
7. Electrode implantation on the nerve in the bath
<ol>
	<li>Prepare a clean nerve cuff electrode for stimulation according to reference21. Place the electrode in the buffer-filled bath chamber. Using forceps or fine tweezers with blunt or angled tips, open the electrode in the bath to wet the inside of the cuff.</li>
	<li>If bubbles remain, use a fine syringe to draw buffer from the bath and force the bubbles out of the cuff. With a tweezer under the nerve, gently open the cuff and slide it under the nerve. Close the cuff around the nerve, taking care to avoid any kinking or twisting of the nerve.</li>
	<li>Connect the stimulation electrode to the stimulator and secure the stimulation electrode lead with tape. Connect the current return electrode to the stimulator and secure the lead with tape. If using a square platinum sheet as the current return electrode, position the sheet away from the nerve in the bath.</li>
</ol>
8. Stimulation and recording
<ol>
	<li>Connect the stimulator TTL signal output to channel 4 of the oscilloscope, which will be used to trigger the oscilloscope. On the oscilloscope screen, press the Trigger channel tab, and specify Channel 4 as the triggering channel. Set the trigger level to 1 V using the Level knob.</li>
	<li>On the oscilloscope, set time resolution to 1 ms/division and voltage resolution to 10 mV/division. Center the trigger reference in time and set the trigger level to 1 V. 
	NOTE: Follow steps 8.3 to 8.6 if using the custom stimulator (see Table of Materials). It is assumed that the MATLAB software and device drivers have been installed on the laboratory computer using instructions provided freely online for the custom neural stimulator21. Otherwise, follow the manufacturer&#39;s instructions for the use of a commercially available stimulator as an alternative.</li>
	<li>Connect the stimulator to the laboratory computer. Turn on the stimulator by connecting the battery power supply to the power input. Start the MATLAB software on the laboratory computer.</li>
	<li>Execute the custom MATLAB script: HFAC_4ch_Stimulator_Initialization.m (Table of Materials). 
	NOTE: The USB communication cable between the computer and stimulator should flash green. If it does not, then there is a configuration error, and the power supply and connections must be verified.</li>
	<li>Open the MATLAB script: HFAC_4ch_Monophasic_Stimulation.m (Table of Materials). By directly editing the MATLAB script, set the parameters as follows: stimulator pulse amplitude = -300 &#181;A, stimulator pulse width = 300 &#181;s, stimulator number of pulses = 10 and stimulator time between pulses = 1 s.</li>
	<li>Start the stimulation protocol by clicking on Run in the MATLAB software.</li>
</ol>

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The authors have no conflicts of interest.
OPEN ACCESS STATEMENT: 
For the purpose of open-access, the author has applied a Creative Common Attribution (CC BY) license (where permitted by UKRI, &#8216;Open Government Licence&#8217; or &#8216;Creative Commons Attribution No-derivatives (CC BY-ND) licence may be stated instead) to any Author Accepted Manuscript version arising.

DATA SHARING: 
The raw data used in the figures of this article will be made available by the authors, without undue reservation.

In this work, we described a protocol to prepare rat sciatic nerves for ex vivo neurophysiology. Tissue extraction takes approximately 30 min, including animal handling, anesthesia, culling, and dissection, while nerve cleaning, placement in the bath, and electrode implantation should require an additional 30 min before recording can be started. Buffer preparation can be carried out in 30 min, though this can be done ahead of the rest of the experiment. This type of preparation and experiment has been used and d...

The current understanding of fundamental nerve function as modeled in silico is lacking in several aspects, notably with respect to the effects of nerve tissue compartmentalization outside of the soma, axon, and dendrites. Axon-myelin interactions are still poorly understood as evidenced by the fact that even detailed computational nerve models such as MRG1 (for mammalian nerves) that adequately capture conventional electrical stimulation response, do not capture other experimentally observed behaviors such as high-frequency block carryover2 or secondary onset response3.
This protocol provides a method to efficiently investigate neurophysiological processes at the nerve level in an acute small laboratory animal model, using a standardized preparation protocol to isolate the nerve, control its environment, and remove it from an in vivo context to an ex vivo context. This will prevent other body processes or anesthetics used by in vivo nerve stimulation protocols to alter nerve behavior and confound measured results or their interpretation4,5. This enables the development of more realistic models focusing solely on effects specific to nerve tissues that are poorly understood. This protocol is also useful as a testbed for new nerve stimulation and recording electrode materials and geometries, as well as new stimulation paradigms such as high-frequency block2,3. Variations of this technique have been used previously to study nerve physiology in tightly controlled conditions6, for example, to measure ion channel dynamics and properties or the effects of local anesthetics7.
This technique provides several advantages compared to alternatives such as acute in vivo small animal experimentation8. The technique obviates the need to maintain anesthesia depth as the tissue has been extracted from the body, reducing the amount of required equipment such as an anesthetic diffuser, oxygen concentrator, and heating pad. This simplifies the experimental protocol, reducing the risk of mistakes. As anesthetics can potentially alter nerve function4, this technique ensures that measures will not be confounded by side effects from these anesthetic compounds. Finally, this technique is more appropriate than acute in vivo experiments when studying the effects of neurotoxic compounds such as tetrodotoxin, which would kill an anesthetized animal by paralysis.
Peripheral nerve sections are a unique ex vivo system since there is a high chance that the fibers responsible for recorded neural signals do not contain any soma. As these would normally be located, for motor neurons, in the spine, and for sensory neurons in the dorsal root ganglia next to the spine, the preparation of a section of the mammalian nerve can be roughly modeled as a collection of tubular membranes with ion channels, open at both ends9. Metabolism is maintained by the mitochondria located in the axon at the time of tissue dissection10. Suturing of the open ends of the axolemma is encouraged after extraction to close them and thereby help maintain existing ionic gradients across the membrane, which are essential for normal nerve function.
To maintain tissue homeostasis outside the body, several environmental variables must be tightly controlled. These are temperature11, oxygenation12, osmolarity, pH13,14, and access to glucose to maintain metabolism. For this protocol, the approach is to use a modified Krebs-Henseleit buffer15,16 (mKHB) continuously aerated with a mixture of oxygen and carbon dioxide. The mKHB is in the family of cardioplegic buffers6,17 used to preserve dissected tissues outside of the body, for example, in ex vivo experiments. These buffers do not contain any hemoglobin, antibiotics, or antifungals and are, therefore, only suitable for preparations involving small amounts of tissue for a limited time. pH control was achieved with the carbonate and carbon dioxide redox pair, requiring constant aeration of the buffer with carbon dioxide to maintain pH equilibrium. This is to avoid using other common buffering agents such as HEPES, which can modify nerve cell function18. To oxygenate the buffer and provide pH control, a mixture of 5% carbon dioxide in oxygen called carbogen (95% O2, 5% CO2) was used. A heating stirrer was used for temperature control of a buffer container, and the buffer was perfused through a nerve bath, and then recirculated to the starting container. A typical experiment would last 6-8 h before the nerve loses its viability and no longer responds sufficiently to stimulation for measures to be representative of healthy tissue.
To optimize the signal-to-noise ratio, silver-chloride electrodes were used for recording, which were prepared according to previously described methods19. For stimulation, a combination of commercial off-the-shelf platinum cuff electrodes and custom-made conductive polymer cuff electrodes can be used. Conductive polymer cuff electrodes have notably higher charge capacities, which are useful when stimulating the nerve using high amplitude waveforms20.
The stimulator used in this protocol has been previously described20. Documentation, design files, and software scripts to use it are publicly available21. Other stimulators can be used to execute this protocol; however, the custom stimulator is also capable of high-frequency alternative current (HFAC) block2,20, which enables a wider range of neurophysiology experiments. To use HFAC block, conductive elastomer cuffs are recommended to avoid damage to the nerve. Conductive elastomer nerve cuffs are soft and fully polymeric electrode arrays produced from conductive elastomers as the conductive component and polydimethylsiloxane as the insulation22. Devices were manufactured in a bipolar configuration using conventional laser microfabrication techniques.

<table border="1" fo:keep-together.within-page="1" fo:keep-with-next.within-page="always">
	<tbody>
		<tr>
			<td>1 L Glass bottle</td>
			<td>VWR International Ltd</td>
			<td>215-1595</td>
			<td>Borosilicate glass</td>
		</tr>
		<tr>
			<td>1 L Glass graduated flask</td>
			<td>VWR International Ltd</td>
			<td>612-3626</td>
			<td>Borosilicate glass</td>
		</tr>
		<tr>
			<td>2 L Glass bottle</td>
			<td>VWR International Ltd</td>
			<td>215-1596</td>
			<td>Borosilicate glass</td>
		</tr>
		<tr>
			<td>2 L Glass graduated flask</td>
			<td>VWR International Ltd</td>
			<td>BRND937254</td>
			<td>Borosilicate glass</td>
		</tr>
		<tr>
			<td>Adaptor, pneumatic, 8 mm to 1/4 NPT</td>
			<td>RS UK</td>
			<td>536-2599</td>
			<td>push-to-fit straight adaptor between oxygen hose and gas dispersion tube</td>
		</tr>
		<tr>
			<td>Alkoxy conformal coating</td>
			<td>Farnell</td>
			<td>1971829</td>
			<td>ACC15 Alkoxy conformal coating for dissection petri dish preparation</td>
		</tr>
		<tr>
			<td>Anesthetic</td>
			<td>Chanelle</td>
			<td>N/A</td>
			<td>Isoflurane inhalation anesthetic, 250 mL bottle</td>
		</tr>
		<tr>
			<td>Beaker, 2 L</td>
			<td>VWR International Ltd</td>
			<td>213-0469</td>
			<td>Borosilicate glass</td>
		</tr>
		<tr>
			<td>Bipolar nerve cuff</td>
			<td>Cortec GMBH</td>
			<td>N/A</td>
			<td>800 micron inner diameter, perpendicular lead out, no connector termination</td>
		</tr>
		<tr>
			<td>Bossheads</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>Standard wet laboratory bossheads for attaching grippers to rods</td>
		</tr>
		<tr>
			<td>Calcium Chloride dihydrate</td>
			<td>Sigma Aldrich</td>
			<td>C7902-500g</td>
			<td>500 g in plastic bottle</td>
		</tr>
		<tr>
			<td>Carbogen canister</td>
			<td>BOC</td>
			<td>N/A</td>
			<td>F-size canister</td>
		</tr>
		<tr>
			<td>Centrifuge Tubes, 15 mL volume</td>
			<td>VWR International Ltd</td>
			<td>734-0451</td>
			<td>Falcon tubes</td>
		</tr>
		<tr>
			<td>Conductive elastomer nerve cuff</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>high charge capacity nerve cuff for stimulation, see protocol for fabrication reference</td>
		</tr>
		<tr>
			<td>Connector, Termimate</td>
			<td>Mouser UK</td>
			<td>538-505073-1100-LP</td>
			<td>These should be soldered to wire terminated with crocodile clips (see entry 11)</td>
		</tr>
		<tr>
			<td>Crocodile clip connectors</td>
			<td>RS UK</td>
			<td>212-1203</td>
			<td>These should be soldered to wire terminated with TermiMate connectors (see entry 10)</td>
		</tr>
		<tr>
			<td>Deionized Water</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>Obtained from deionized water dispenser</td>
		</tr>
		<tr>
			<td>Forceps angled 45 degrees</td>
			<td>InterFocus Ltd</td>
			<td>91110-10</td>
			<td>Fine forceps, student range</td>
		</tr>
		<tr>
			<td>Forceps standard Dumont #7</td>
			<td>InterFocus Ltd</td>
			<td>91197-00</td>
			<td>Student range forceps</td>
		</tr>
		<tr>
			<td>Gas Disperson Tube, Porosity 3</td>
			<td>Merck</td>
			<td>12547866</td>
			<td>N/A</td>
		</tr>
		<tr>
			<td>Glucose anhydrous, powder</td>
			<td>VWR International Ltd</td>
			<td>101174Y</td>
			<td>500 g in plastic bottle</td>
		</tr>
		<tr>
			<td>Grippers</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>Standard wet laboratory rod-mounted grippers</td>
		</tr>
		<tr>
			<td>Heating Stirrer</td>
			<td>RS UK</td>
			<td>768-9672</td>
			<td>Stuart US152</td>
		</tr>
		<tr>
			<td>Hemostats</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>Any hemostat &#62;12 cm in length is suitable</td>
		</tr>
		<tr>
			<td>Insect Pins, stainless steel, size 2</td>
			<td>InterFocus Ltd</td>
			<td>26001-45</td>
			<td>N/A</td>
		</tr>
		<tr>
			<td>Laptop computer</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>Any laboratory-safe portable computer with at least 2 unused USB ports is suitable</td>
		</tr>
		<tr>
			<td>Line Noise Filter</td>
			<td>Digitimer</td>
			<td>N/A</td>
			<td>Humbug noise eliminator (50 Hz line noise filter)</td>
		</tr>
		<tr>
			<td>Low-Noise Preamplifier, SR560</td>
			<td>Stanford Research Systems</td>
			<td>SR560</td>
			<td>Low-noise voltage preamplifier</td>
		</tr>
		<tr>
			<td>Magnesium Sulphate salt</td>
			<td>VWR International Ltd</td>
			<td>291184P</td>
			<td>500g in plastic bottle</td>
		</tr>
		<tr>
			<td>MATLAB scripts</td>
			<td>Github</td>
			<td>https://github.com/Next-Generation-Neural-Interfaces/HFAC_Stimulator_4ch</td>
			<td>Initialization, calibration and stimulation scripts for the custom stimulator</td>
		</tr>
		<tr>
			<td>MATLAB software</td>
			<td>Mathworks</td>
			<td>N/A</td>
			<td>Standard package</td>
		</tr>
		<tr>
			<td>Microscope Light, PL-2000</td>
			<td>Photonic</td>
			<td>N/A</td>
			<td>Light source with swan necks. Product may be obtained from third party supplier</td>
		</tr>
		<tr>
			<td>Microscope, SMZ 745</td>
			<td>Nikon</td>
			<td>SM745</td>
			<td>Stereoscopic Microscope</td>
		</tr>
		<tr>
			<td>Mineral oil, non-toxic</td>
			<td>VWR International Ltd</td>
			<td>31911.A1</td>
			<td>Oil for nerve bath</td>
		</tr>
		<tr>
			<td>Nerve Bath</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>Plexiglas machined nerve bath, see protocol for details.</td>
		</tr>
		<tr>
			<td>Oscilloscope</td>
			<td>LeCroy</td>
			<td>N/A</td>
			<td>434 Wavesurfer. Product may be obtained from 3rd party suppliers</td>
		</tr>
		<tr>
			<td>Oxygen Hose, 1 meter</td>
			<td>BOC</td>
			<td>N/A</td>
			<td>1/4&#34; NPT terminations</td>
		</tr>
		<tr>
			<td>Oxygen Regulator</td>
			<td>BOC</td>
			<td>C106X/2B:3.5BAR-BS3-1/4&#34;NPTF 230Bar</td>
			<td>N/A</td>
		</tr>
		<tr>
			<td>Peristaltic Pump P-1</td>
			<td>Pharmacia Biotech</td>
			<td>N/A</td>
			<td>Product may be obtained from third party supplier</td>
		</tr>
		<tr>
			<td>Petri Dish, Glass</td>
			<td>VWR International Ltd</td>
			<td>391-0580&#160;</td>
			<td>N/A</td>
		</tr>
		<tr>
			<td>Potassium Chloride salt</td>
			<td>Sigma Aldrich</td>
			<td>P5405-250g</td>
			<td>250 g in plastic bottle</td>
		</tr>
		<tr>
			<td>Potassium Dihydrogen Sulphate salt</td>
			<td>Merck</td>
			<td>1.04873.0250</td>
			<td>250 g in plastic bottle</td>
		</tr>
		<tr>
			<td>Rat</td>
			<td>Charles River Laboratories</td>
			<td>N/A</td>
			<td>Sprague Dawley, 250-330 grams, female</td>
		</tr>
		<tr>
			<td>Reference electrode, ET072</td>
			<td>eDaQ (Australia)</td>
			<td>ET072-1</td>
			<td>Silver silver-chloride reference electrode</td>
		</tr>
		<tr>
			<td>Rod</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>Standard wet laboratory rods with fittings for stands</td>
		</tr>
		<tr>
			<td>Scale</td>
			<td>Sartorius</td>
			<td>N/A</td>
			<td>M-Power scale, for weighing powders. Product may be obtained from third-party suppliers</td>
		</tr>
		<tr>
			<td>Scissors straight 12 cm edge</td>
			<td>InterFocus Ltd</td>
			<td>91400-12</td>
			<td>blunt-blunt termination, student range</td>
		</tr>
		<tr>
			<td>Signal Acquisition Device</td>
			<td>Cambridge Electronic Design</td>
			<td>Micro3-1401</td>
			<td>Micro3-1401 Multichannel ADC</td>
		</tr>
		<tr>
			<td>Silicone grease, non-toxic</td>
			<td>Farnell</td>
			<td>3821559</td>
			<td>for sealing of bath partition</td>
		</tr>
		<tr>
			<td>Silicone tubing, 2 mm inner diameter</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>N/A</td>
		</tr>
		<tr>
			<td>Silicone tubing, 5 mm inner diameter</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>N/A</td>
		</tr>
		<tr>
			<td>Silver wire</td>
			<td>Alfa Aesar</td>
			<td>41390</td>
			<td>0.5 mm, annealed</td>
		</tr>
		<tr>
			<td>Sodium Bicarbonate salt</td>
			<td>Sigma Aldrich</td>
			<td>S5761-500g</td>
			<td>500 g in plastic bottle</td>
		</tr>
		<tr>
			<td>Sodium Chloride salt</td>
			<td>VWR International Ltd</td>
			<td>27810.295</td>
			<td>1 kg in plastic bottle</td>
		</tr>
		<tr>
			<td>Spring scissors angled 2 mm edge</td>
			<td>InterFocus Ltd</td>
			<td>15010-09</td>
			<td>N/A</td>
		</tr>
		<tr>
			<td>Stand</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>Standard wet laboratory stands with sockets for rods</td>
		</tr>
		<tr>
			<td>Stimulator</td>
			<td>Digitimer</td>
			<td>DS3</td>
			<td>DS3 or Custom Stimulator (see references)</td>
		</tr>
		<tr>
			<td>Stirring flea</td>
			<td>VWR International Ltd</td>
			<td>442-0270</td>
			<td>For use with the heating stirrer</td>
		</tr>
		<tr>
			<td>Syringe tip, blunt, 1 mm diameter</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>N/A</td>
		</tr>
		<tr>
			<td>Syringe tip, blunt, 2 mm diameter</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>N/A</td>
		</tr>
		<tr>
			<td>Syringe, plastic, 10 mL volume</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>syringe should have luer lock fitting</td>
		</tr>
		<tr>
			<td>Tape, water-resistant</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>For securing tubing and wiring to workbench</td>
		</tr>
		<tr>
			<td>Thermometer</td>
			<td>VWR International Ltd</td>
			<td>620-0806</td>
			<td>glass thermometer</td>
		</tr>
		<tr>
			<td>USB Power Bank</td>
			<td>RS UK</td>
			<td>135-1000</td>
			<td>Custom Stimulator power supply, fully charge before experiment. Not needed if using DS3</td>
		</tr>
		<tr>
			<td>Valve, Leuer Lock, 3-Way</td>
			<td>VWR International Ltd</td>
			<td>229-7440</td>
			<td>For attaching syringe to bath feed tube and priming siphon</td>
		</tr>
	</tbody>
</table>

preparation of rat sciatic nerve for ex vivo neurophysiology

Ex vivo preparations enable the study of many neurophysiological processes in isolation from the rest of the body while preserving local tissue structure. This work describes the preparation of rat sciatic nerves for ex vivo neurophysiology, including buffer preparation, animal procedures, equipment setup and neurophysiological recording. This work provides an overview of the different types of experiments possible with this method. The outlined method aims to provide 6 h of stimulation and recording on extracted peripheral nerve tissue in tightly controlled conditions for optimal consistency in results. Results obtained using this method are A-fibre compound action potentials (CAP) with peak-to-peak amplitudes in the millivolt range over the entire duration of the experiment. CAP amplitudes and shapes are consistent and reliable, making them useful to test and compare new electrodes to existing models, or the effects of interventions on the tissue, such as the use of chemicals, surgical alterations, or neuromodulatory stimulation techniques. Both conventional commercially available cuff electrodes with platinum-iridium contacts and custom-made conductive elastomer electrodes were tested and gave similar results in terms of nerve stimulus strength-duration response.

Representative results that can be obtained with this protocol are the consistent compound action potentials from A-type nerve fibers within the sciatic nerve. These action potentials typically have a peak-to-peak amplitude of approximately 1 mV at the electrode and therefore 100 mV once amplified (Figure 2). Similar stimulation amplitudes and pulse widths should yield similar CAP amplitudes. Conductive elastomer cuff electrodes will generally require slightly higher stimulation amplitudes i...

Watch this Scientific Journal Video about Preparation of Rat Sciatic Nerve for Ex Vivo Neurophysiology at JoVE.com

Preparation of Rat Sciatic Nerve for Ex Vivo Neurophysiology

This protocol describes the preparation of rat whole sciatic nerve tissue for ex vivo electrophysiological stimulation and recording in an environmentally-regulated, two-compartment, perfused saline bath.

Preparation of Rat Sciatic Nerve for Ex Vivo Neurophysiology

Ex vivo preparations enable the study of many neurophysiological processes in isolation from the rest of the body while preserving local tissue structure. ...

preparation-of-rat-sciatic-nerve-for-ex-vivo-neurophysiology

Research

JoVE Journal

Neuroscience

4.0K Views.  Imperial College London. This protocol describes the preparation of rat whole sciatic nerve tissue for ex vivo electrophysiological stimulation and recording in an environmentally-regulated, two-compartment, perfused saline bath.

Video: Preparation of Rat Sciatic Nerve for Ex Vivo Neurophysiology

Axoplasm Isolation from Rat Sciatic Nerve

Isolation of pure axonal cytoplasm (axoplasm) from peripheral nerve is crucial for biochemical studies of many biological processes. In this article, we demonstrate and describe a protocol for axoplasm isolation from adult rat sciatic nerve based on the following steps: (1) dissection of nerve fascicles and separation of connective tissue; (2) incubation of short segments of nerve fascicles in hypotonic medium to release myelin and lyse non-axonal structures; and (3) extraction of the remaining axon-enriched material. Proteomic and biochemical characterization of this preparation has confirmed a high degree of enrichment for axonal components.

We demonstrate a protocol for axoplasm isolation from adult rat sciatic nerve based on dissection of nerve fascicles and incubation in hypotonic medium to release myelin and lyse non-axonal structures, followed by extraction of the remaining axon-enriched material.

Isolation of pure axonal cytoplasm (axoplasm) from peripheral nerve is crucial for biochemical studies of many biological processes. In this article, we ...

Reproducible Mouse Sciatic Nerve Crush and Subsequent Assessment of Regeneration by Whole Mount Muscle Analysis

Regeneration in the peripheral nervous system (PNS) is widely studied both for its relevance to human disease and to understand the robust regenerative response mounted by PNS neurons thereby possibly illuminating the failures of CNS regeneration1. Sciatic nerve crush (axonotmesis) is one of the most common models of peripheral nerve injury in rodents2. Crushing interrupts all axons but Schwann cell basal laminae are preserved so that regeneration is optimal3,4. This allows the investigator to study precisely the ability of a growing axon to interact with both the Schwann cell and basal laminae4. Rats have generally been the preferred animal models for experimental nerve crush. They are widely available and their lesioned sciatic nerve provides a reasonable approximation of human nerve lesions5,4. Though smaller in size than rat nerve, the mouse nerve has many similar qualities. Most importantly though, mouse models are increasingly valuable because of the wide availability of transgenic lines now allows for a detailed dissection of the individual molecules critical for nerve regeneration6, 7. Prior investigators have used multiple methods to produce a nerve crush or injury including simple angled forceps, chilled forceps, hemostatic forceps, vascular clamps, and investigator-designed clamps8,9,10,11,12. Investigators have also used various methods of marking the injury site including suture, carbon particles and fluorescent beads13,14,1. We describe our method to obtain a reproducibly complete sciatic nerve crush with accurate and persistent marking of the crush-site using a fine hemostatic forceps and subsequent carbon crush-site marking. As part of our description of the sciatic nerve crush procedure we have also included a relatively simple method of muscle whole mount we use to subsequently quantify regeneration.

In this report we describe a method to crush mouse sciatic nerve. This method uses readily available hemostatic forceps and easily and reproducibly produces complete sciatic nerve crush. In addition, we describe a method to prepare muscle whole mounts suitable for analysis of nerve regeneration after sciatic nerve crush.

Regeneration in the peripheral nervous system (PNS) is widely studied both for its relevance to human disease and to understand the robust regenerative ...

In Vivo Electrophysiological Measurements on Mouse Sciatic Nerves

Electrophysiological studies allow a rational classification of various neuromuscular diseases and are of help, together with neuropathological techniques, in the understanding of the underlying pathophysiology1. Here we describe a method to perform electrophysiological studies on mouse sciatic nerves in vivo.
The animals are anesthetized with isoflurane in order to ensure analgesia for the tested mice and undisturbed working environment during the measurements that take about 30 min/animal. A constant body temperature of 37 &#176;C is maintained by a heating plate and continuously measured by a rectal thermo probe2. Additionally, an electrocardiogram (ECG) is routinely recorded during the measurements in order to continuously monitor the physiological state of the investigated animals.
Electrophysiological recordings are performed on the sciatic nerve, the largest nerve of the peripheral nervous system (PNS), supplying the mouse hind limb with both motoric and sensory fiber tracts. In our protocol, sciatic nerves remain in situ and therefore do not have to be extracted or exposed, allowing measurements without any adverse nerve irritations along with actual recordings. Using appropriate needle electrodes3 we perform both proximal and distal nerve stimulations, registering the transmitted potentials with sensing electrodes at gastrocnemius muscles. After data processing, reliable and highly consistent values for the nerve conduction velocity (NCV) and the compound motor action potential (CMAP), the key parameters for quantification of gross peripheral nerve functioning, can be achieved.

In Vivo Electrophysiological Measurements on Mouse Sciatic Nerves

Measurements of nerve conduction properties in vivo exemplify a powerful tool to characterize various animal models of neuromuscular diseases. Here, we present an easy and reliable protocol by which electrophysiological analysis on sciatic nerves of anesthetized mice can be performed.

Electrophysiological studies allow a rational classification of various neuromuscular diseases and are of help, together with neuropathological ...

In Vivo Gene Transfer to Schwann Cells in the Rodent Sciatic Nerve by Electroporation

The formation of the myelin sheath by Schwann cells (SCs) is essential for rapid conduction of nerve impulses along axons in the peripheral nervous system. SC-selective genetic manipulation in living animals is a powerful technique for studying the molecular and cellular mechanisms of SC myelination and demyelination in vivo. While knockout/knockin and transgenic mice are powerful tools for studying SC biology, these methods are costly and time consuming. Viral vector-mediated transgene introduction into the sciatic nerve is a simpler and less laborious method. However, viral methods have limitations, such as toxicity, transgene size constraints, and infectivity restricted to certain developmental stages. Here, we describe a new method that allows selective transfection of myelinating SCs in the rodent sciatic nerve using electroporation. By applying electric pulses to the sciatic nerve at the site of plasmid DNA injection, genes of interest can be easily silenced or overexpressed in SCs in both neonatal and more mature animals. Furthermore, this in vivo electroporation method allows for highly efficient simultaneous expression of multiple transgenes. Our novel technique should enable researchers to efficiently manipulate SC gene expression, and facilitate studies on SC development and function.

In Vivo Gene Transfer to Schwann Cells in the Rodent Sciatic Nerve by Electroporation

Here, we present an in vivo technique for gene transfer to Schwann cells (SCs) in the rodent sciatic nerve. This simple technique is useful for investigating signaling mechanisms involved in the development and maintenance of myelinating SCs.

The formation of the myelin sheath by Schwann cells (SCs) is essential for rapid conduction of nerve impulses along axons in the peripheral nervous ...

In Vivo Electrophysiological Measurement of the Rat Ulnar Nerve with Axonal Excitability Testing

Electrophysiology enables the objective assessment of peripheral nerve function in vivo. Traditional nerve conduction measures such as amplitude and latency detect chronic axon loss and demyelination, respectively. Axonal excitability techniques &#34;by threshold tracking&#34; expand upon these measures by providing information regarding the activity of ion channels, pumps and exchangers that relate to acute function and may precede degenerative events. As such, the use of axonal excitability in animal models of neurological disorders may provide a useful in vivo measure to assess novel therapeutic interventions. Here we describe an experimental setup for multiple measures of motor axonal excitability techniques in the rat ulnar nerve.
The animals are anesthetized with isoflurane and carefully monitored to ensure constant and adequate depth of anesthesia. Body temperature, respiration rate, heart rate and saturation of oxygen in the blood are continuously monitored. Axonal excitability studies are performed using percutaneous stimulation of the ulnar nerve and recording from the hypothenar muscles of the forelimb paw. With correct electrode placement, a clear compound muscle action potential that increases in amplitude with increasing stimulus intensity is recorded. An automated program is then utilized to deliver a series of electrical pulses which generate 5 specific excitability measures in the following sequence: stimulus response behavior, strength duration time constant, threshold electrotonus, current-threshold relationship and the recovery cycle.
Data presented here indicate that these measures are repeatable and show similarity between left and right ulnar nerves when assessed on the same day. A limitation of these techniques in this setting is the effect of dose and time under anesthesia. Careful monitoring and recording of these variables should be undertaken for consideration at the time of analysis.

In Vivo Electrophysiological Measurement of the Rat Ulnar Nerve with Axonal Excitability Testing

Axonal excitability techniques provide a powerful tool to examine pathophysiology and biophysical changes that precede irreversible degenerative events. This manuscript demonstrates the use of these techniques on the ulnar nerve of anesthetized rats.

Electrophysiology enables the objective assessment of peripheral nerve function in vivo. Traditional nerve conduction measures such as amplitude and ...

Use of In Vivo Single-fiber Recording and Intact Dorsal Root Ganglion with Attached Sciatic Nerve to Examine the Mechanism of Conduction Failure

Single-fiber recording has been a classical and effective electrophysiological technique over the last few decades because of its specific application for nerve fibers in the central and peripheral nervous systems. This method is particularly applicable to dorsal root ganglia (DRG), which are primary sensory neurons that exhibit a pseudo-unipolar structure of nervous processes. The patterns and features of the action potentials passed along axons are recordable in these neurons. The present study uses in vivo single-fiber recordings to observe the conduction failure of sciatic nerves in complete Freund&#8217;s adjuvant (CFA)-treated rats. As the underlying mechanism cannot be studied using in vivo single-fiber recordings, patch-clamp-recordings of DRG neurons are performed on preparations of intact DRG with the attached sciatic nerve. These recordings reveal a positive correlation between conduction failure and the rising slope of the after-hyperpolarization potential (AHP) of DRG neurons in CFA-treated animals. The protocol for in vivo single fiber-recordings allows the classification of nerve fibers via the measurement of conduction velocity and monitoring of abnormal conditions in nerve fibers in certain diseases. Intact DRG with attached peripheral nerve allows observation of the activity of DRG neurons in most physiological conditions. Conclusively, single-fiber recording combined with electrophysiological recording of intact DRGs is an effective method to examine the role of conduction failure during the analgesic process.

Single-fiber recording is an effective electrophysiological technique that is applicable to the central and peripheral nervous systems. Along with the preparation of intact DRG with the attached sciatic nerve, the mechanism of conduction failure is examined. Both protocols improve the understanding of the peripheral nervous system&#39;s relationship with pain.

Single-fiber recording has been a classical and effective electrophysiological technique over the last few decades because of its specific application for ...

Preparation of Newborn Rat Brain Tissue for Ultrastructural Morphometric Analysis of Synaptic Vesicle Distribution at Nerve Terminals

Our laboratory and many others have exploited the high resolving power of transmission electron microscopy to study the morphology and spatial organization of synaptic vesicles. In order to obtain high-quality electron micrographs that can yield the degree of morphological detail necessary for quantitative analysis of pre-synaptic vesicle distribution, optimal specimen preparation is critical. Chemical fixation is the first step in the process of specimen preparation, and of utmost importance to preserve fine ultrastructure. Vascular fixation with a glutaraldehyde-formaldehyde solution, followed by treatment of vibratome-sectioned specimens with osmium tetroxide, stabilizes the maximum number of molecules, especially proteins and lipids, and results in superior conservation of ultrastructure. Tissue is then processed with counterstaining, sequential dehydration and resin-embedding. En bloc staining with uranyl acetate (i.e., staining of vibratome-sectioned tissue before resin embedding) enhances endogenous contrast and stabilizes cell components against extraction during specimen processing. Contrast can be further increased by applying uranyl acetate as a post-stain on ultrathin sections. Double-staining of ultrathin sections with lead citrate after uranyl acetate treatment also improves image resolution, by intensifying electron-opacity of nucleic acid-containing structures through selective binding of lead to uranyl acetate. Transmission electron microscopy is a powerful tool for characterization of the morphological details of synaptic vesicles and quantification of their size and spatial organization in the terminal bouton. However, because it uses fixed tissue, transmission electron microscopy can only provide indirect information regarding living or evolving processes. Therefore, other techniques should be considered when the main objective is to study dynamic or functional aspects of synaptic vesicle trafficking and exocytosis.

We describe procedures for processing newborn rat brain tissue to obtain high-resolution electron micrographs for morphometric analysis of synaptic vesicle distribution at nerve terminals. The micrographs obtained with these methods can also be used to study the morphology of a number of other cellular components and their dimensional structural relationships.

Our laboratory and many others have exploited the high resolving power of transmission electron microscopy to study the morphology and spatial ...

Ex Vivo Oculomotor Slice Culture from Embryonic GFP-Expressing Mice for Time-Lapse Imaging of Oculomotor Nerve Outgrowth

Accurate eye movements are crucial for vision, but the development of the ocular motor system, especially the molecular pathways controlling axon guidance, has not been fully elucidated. This is partly due to technical limitations of traditional axon guidance assays. To identify additional axon guidance cues influencing the oculomotor nerve, an ex vivo slice assay to image the oculomotor nerve in real-time as it grows towards the eye was developed. E10.5 IslMN-GFP embryos are used to generate ex vivo slices by embedding them in agarose, slicing on a vibratome, then growing them in a microscope stage-top incubator with time-lapse photomicroscopy for 24-72 h. Control slices recapitulate the in vivo timing of outgrowth of axons from the nucleus to the orbit. Small molecule inhibitors or recombinant proteins can be added to the culture media to assess the role of different axon guidance pathways. This method has the advantages of maintaining more of the local microenvironment through which axons traverse, not axotomizing the growing axons, and assessing the axons at multiple points along their trajectory. It can also identify effects on specific subsets of axons. For example, inhibition of CXCR4 causes axons still within the midbrain to grow dorsally rather than ventrally, but axons that have already exited ventrally are not affected.

An ex vivo slice assay allows oculomotor nerve outgrowth to be imaged in real time. Slices are generated by embedding E10.5 IslMN:GFP embryos in agarose, slicing on a vibratome, and growing in a stage-top incubator. The role of axon guidance pathways is assessed by adding inhibitors to the culture media.

Accurate eye movements are crucial for vision, but the development of the ocular motor system, especially the molecular pathways controlling axon ...

3D Kinematic Analysis for the Functional Evaluation in the Rat Model of Sciatic Nerve Crush Injury

Compared to the Sciatic Functional Index (SFI), kinematic analysis is a more reliable and sensitive method for performing functional evaluations of sciatic nerve injury rodent models. In this protocol, we describe a novel kinematic analysis method that uses a three-dimensional (3D) motion capture apparatus for functional evaluations using a rat sciatic nerve crush injury model. First, the rat is familiarized with treadmill walking. Markers are then attached to the designated bone landmarks and the rat is made to walk on the treadmill at the desired speed. Meanwhile, the posterior limb movements of the rat are recorded using four cameras. Depending on the software used, marker tracings are created using both automatic and manual modes and the desired data are produced after subtle adjustments. This method of kinematic analysis, which uses a 3D motion capture apparatus, offers numerous advantages, including superior precision and accuracy. Many more parameters can be investigated during the comprehensive functional evaluations. This method has several shortcomings that require consideration: The system is expensive, can be complicated to operate, and may produce data deviations due to skin shifting. Nevertheless, kinematic analysis using a 3D motion capture apparatus is useful for performing functional anterior and posterior limb evaluations. In the future, this method may become increasingly useful for generating accurate assessments of various traumas and diseases.

We introduce a kinematic analysis method that uses a three-dimensional motion capture apparatus containing four cameras and data processing software for performing functional evaluations during fundamental research involving rodent models.

Compared to the Sciatic Functional Index (SFI), kinematic analysis is a more reliable and sensitive method for performing functional evaluations of ...

Ex Vivo Pressurized Hippocampal Capillary-Parenchymal Arteriole Preparation for Functional Study

From subtle behavioral alterations to late-stage dementia, vascular cognitive impairment typically develops following cerebral ischemia. Stroke and cardiac arrest are remarkably sexually dimorphic diseases, and both induce cerebral ischemia. However, progress in understanding the vascular cognitive impairment, and then developing sex-specific treatments, has been partly limited by challenges in investigating the brain microcirculation from mouse models in functional studies. Here, we present an approach to examine the capillary-to-arteriole signaling in an ex vivo hippocampal capillary-parenchymal arteriole (HiCaPA) preparation from mouse brain. We describe how to isolate, cannulate, and pressurize the microcirculation to measure arteriolar diameter in response to capillary stimulation. We show which appropriate functional controls can be used to validate the HiCaPA preparation integrity and display typical results, including testing potassium as a neurovascular coupling agent and the effect of the recently characterized inhibitor of the Kir2 inward rectifying potassium channel family, ML133. Further, we compare the responses in preparations obtained from male and female mice. While these data reflect functional investigations, our approach can also be used in molecular biology, immunochemistry, and electrophysiology studies.

The present manuscript details how to isolate hippocampal arterioles and capillaries from the mouse brain and how to pressurize them for pressure myography, immunofluorescence, biochemistry, and molecular studies.

From subtle behavioral alterations to late-stage dementia, vascular cognitive impairment typically develops following cerebral ischemia. Stroke and ...