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Method Article
Here we present a robust and detailed method of microtubule dynamics analysis in cells synchronized in prometaphase using live-cell spinning disk confocal microscopy and MATLAB-based image processing.
We describe a modification of an established method to determine microtubule dynamics in living cells. The protocol is based on the expression of a genetically encoded marker for the positive ends of microtubules (EB3 labelled with tdTomato fluorescent protein) and high-speed, high-resolution, live-cell imaging using spinning disk confocal microscopy. Cell cycle synchronization and increased density of microtubules are achieved by inhibiting centrosomal separation in mitotic cells, and analysis of growth is performed using open-source U-Track software. The use of a bright and red-shifted fluorescent protein, in combination with the lower laser power and reduced exposure time required for spinning disk microscopy reduce phototoxicity and the probability of light-induced artifacts. This allows for imaging a larger number of cells in the same preparation while maintaining the cells in a growth medium under standard culture conditions. Because the analysis is performed in a supervised automatic fashion, the results are statistically robust and reproducible.
Microtubules (MTs) are highly dynamic structures found in virtually all eukaryotic cells and in some bacteria1. Together with actin and intermediate filaments, they sculpt the cytoskeleton2,3. Cell division4, molecule transport5, flagellar beating6, the sensation of the surrounding environment through primary cilium7, hearing (kinocilium)8,9, embryogenesis10,11,
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1. Seeding of HeLa Cells
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Following the given protocol outlined in Figure 1A, the pEB3-tdTomato plasmid was transiently expressed in asynchronously growing HeLa cells. The cells were synchronized 48 h after the transfection at prometaphase through DME treatment (Figure 1B). This step ensured that the measurement of MT dynamics was always done at the same phase of the cell cycle. The time-lapse movies were further processed and analyzed with U-Track v2.2.0 as described in its supplementar.......
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Here, we describe a modification of a method first established by Ertych et al.44. Along with several other modifications, we combine this technique of MT dynamics analysis with dual spinning disk confocal imaging. The use of the dual spinning disk improves the resolution of growing MTs while reducing phototoxicity36. We further reduce the photobleaching and laser light-induced damage of the cells by switching to a longer wavelength fluorescent reporter. The tdTomato fluore.......
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The authors have nothing to disclose.
We thank the members of the Light Microscopy Facility, Max-Planck Institute of Experimental Medicine, for their expert advice and support.
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Name | Company | Catalog Number | Comments |
Dimethylenastron | Merck | 324622 | |
DMEM w/o phenol red | Gibco | 31053-28 | |
DPBS | Gibco | 14190-094 | |
Fetal bovine serum | Biochrom | S0415 | |
Fibronectin Bovine Plasma | Merck | F4759 | Sterile powder |
GlutaMAX | Gibco | 35050-038 | Stable glutamine substitutive |
jetPRIME | Polyplus | 114-15 | |
EB3-TdTomato | Addgene | plasmid #50708 | |
RPMI 1640 | Gibco | 61870-010 | |
Trypan Blue | Merck | T8154-20ML | |
Trypsin/EDTA solution | Biochrom | L2143 | 0.05%/0.02 % w/o calcium and magnesium |
µ-slide | Ibidi | 80426 | 4-well slide with #1.5 coverslip |
Eclipse Ti Inverted microscope | Nikon | NA | |
Objective | Nikon | MRD01991 | CFI Apo TIRF 100xC Oil |
ACAL Laser Excahnger | Nikon | Laser box. 405, 458, 488, 514, 561 and 647 nm | |
Spinning disk module | Andor | CSU-W | |
Camera | Andor | iXon Ultra 888 | |
Environmental Chamber | Okolab | Dark chamber equipped with CO2 supply, temperature control and humidifier | |
HeLa Cells | DSMZ | ACC-57 | |
NIS Elements v4 | Nikon | Spinning disk microscope. Acquisition Software | |
MATLAB | Mathworks | Computing environment | |
Prism 8 | GraphPad | Statistical analysis and display software |
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