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In This Article

  • Summary
  • Abstract
  • Introduction
  • Protocol
  • Representative Results
  • Discussion
  • Acknowledgements
  • Materials
  • References
  • Reprints and Permissions

Summary

In this article, we detail methods to characterize an enzyme's ability to retain function when incubated at 37 °C in human serum, a pharmacological property referred to as its serum stability. This ability may be a key factor in predicting an enzyme's pharmacokinetic profile and its suitability for therapeutic use.

Abstract

The concept of enzyme stability is typically used to refer to an enzyme's thermostability - its ability to retain structure and activity as temperature increases. For a therapeutic enzyme, other measures of stability may also be critical, particularly its ability to retain function in human serum at 37 °C, which we refer to as serum stability. Here, we describe an in vitro assay to assess the serum stability of the wildtype Homo sapiens adenosine deaminase I (HsADA1) enzyme using an absorbance-based microplate procedure. Specifically, this manuscript describes the preparation of buffers and reagents, a method arranging for the coincubation of HsADA1 in serum, a method to analyze the test samples using a microplate reader, and an accompanying analysis to determine the fraction of activity that an HsADA1 enzyme retains in serum as a function of time. We further discuss considerations to adapt this protocol to other enzymes, using an example of a Homo sapiens kynureninase enzyme, to help aid the protocol's adaptation to other enzymes where serum stability is of interest.

Introduction

The following method allows a user to quantitatively assess an enzyme's ability to retain its activity when exposed to conditions that mimic what it will encounter following intravenous injection. The in vitro method mimics such in vivo conditions and consists of the incubation of the enzyme in pooled human serum at 37 °C and time-coursed analyses of retention of enzyme activity. We refer to an enzyme's ability to retain activity in these conditions as its serum stability, and the analysis method for enzyme activity takes advantage of differences in absorbance between an enzyme's substrate and the resulting product. The concept of se....

Protocol

1. Serum incubation

  1. Prepare a 10x stock of HsADA1 in 1x PBS pH 7.4 (1x PBS) at a final concentration of 10 µM. Thaw a 15 mL aliquot of pooled human serum and pre-warm it to 37 °C. Prewarm a 50 mL aliquot of 1x PBS to 37 °C.
  2. Prepare the enzyme-serum incubation mixtures by adding 100 µL of the 10x HsADA1 stock to 900 µL of pooled human serum in a low-bind microcentrifuge tube, referred to as the enzyme + serum mixture. In a separate low-bind microcentrifuge tu.......

Representative Results

The figures show the results of the assay run when conducted with wildtype HsADA1. Figure 3A,B illustrate the absorbance decline curves at 260 nm of the samples originating from the 1x PBS/serum-enzyme mixtures for wildtype HsADA1 after the addition of adenosine. This declining absorbance as a function of time data is what the user may expect upon successful completion of the microplate-based assay and is similar to absorbance data that would arise after adding sufficient am.......

Discussion

This protocol uses absorbance change as the substrate is converted to the product to gauge the activity of an enzyme. As such, the substrate and product must have distinct spectral profiles. This is the case with adenosine and inosine both having distinct spectral profiles and extinction coefficients between 260-265 nm6,8,12,13. This assay is inspired by several previous works. Kalackar, for ex.......

Acknowledgements

This work was supported by the National Institutes of Health [1DP2CA280622-01] and funding from Biolocity. We thank Dr. Maria Jennings and Andrea Fox for providing the HsADA1 and HsKYNase expression vectors.

....

Materials

NameCompanyCatalog NumberComments
Adenosine Sigma AldrichA9251-25G25 g
BioTek Synergy HT Microplate Reader
Eppendorf LoBind Microcentrifuge Tubes: Protein Fisher Scientific 13-698-7952 mL
GlycerolFisher Scientific G33-44 L
HsKYNase66-W102H-T333NIn-house
Human Serum, PooledMP Biomedicals92931149100 mL
Hydroxy-kynurenineCayman Chemicals27778
Inosine TCII003725 g
PBS, 1x  pH 7.4+/- 0.1Corning21-040-CM
Pyridoxal 5-phosphate monohydrate, 99% Thermo Scientifc2281700101 g
UV-STAR MICROPLATE, 96 WELL, COC, F-BOTTOMGreiner Bio 655801
Wildtype Human Adenosine Deaminase 1In-house

References

  1. Valero, J., et al. A serum-stable RNA aptamer specific for SARS-COV-2 neutralizes viral entry. Proc Natl Acad Sci U S A. 118 (50), e2112942118 (2021).
  2. Iannuzo, N., et al.

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Serum StabilityEnzyme StabilityThermostabilityAdenosine Deaminase 1HsADA1In Vitro AssayAbsorbance based Microplate ProcedureSerum FunctionEnzyme Activity AnalysisMicroplate ReaderKynureninase EnzymeProtocol Adaptation

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