Genome‐Wide Substitution Mutagenesis of JFH1 Using Error‐Prone PCR
2:46
Estimation of the Proportion of Mutations in ep‐PCR Products (Mutant Libraries)
6:08
Viral RNA Transfection of the Huh7.5 Cell Line
7:57
Quantification of Virus Titers
11:59
Drug‐Resistant Viral Variant Selection
13:33
Results: Integration of ep‐PCR and Virus Reverse Genetics to Generate HCV Mutants
15:17
Conclusion
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The protocol described here allows generation of randomly mutagenized full length RNA libraries of single strand positive RNA viral genomes up to 10 kilobytes in length, and selection of phenotypes of interest under desired experimental conditions
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The protocol describes a method for introducing controllable genetic diversity in the hepatitis C virus genome by combining full-length mutant RNA synthesis using error-prone PCR and reverse genetics. The method provides a model for phenotype selection and can be used for 10 kb long positive-sense RNA virus genomes.