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Table of Contents

Archive: Issue 172, June 2021

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Behavior(6)
Biochemistry(13)
Bioengineering(7)
Biology(9)
Cancer Research(5)
Chemistry(5)
Developmental Biology(3)
Engineering(2)
Environment(1)
Genetics(2)
Immunology and Infection(10)
Medicine(14)
Neuroscience(16)
Interaction between Phonological and Semantic Processes in Visual Word Recognition using Electrophysiology

Interaction between Phonological and Semantic Processes in Visual Word Recognition using Electrophysiology

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Journal (Behavior)

Comparison of Kinetic Characteristics of Footwork during Stroke in Table Tennis: Cross-Step and Chasse Step

Comparison of Kinetic Characteristics of Footwork during Stroke in Table Tennis: Cross-Step and Chasse Step

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Journal (Behavior)

A High Throughput Microplate Feeder Assay for Quantification of Consumption in <em>Drosophila</em>

A High Throughput Microplate Feeder Assay for Quantification of Consumption in Drosophila

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Journal (Behavior)

Using a Murine Model of Psychosocial Stress in Pregnancy as a Translationally Relevant Paradigm for Psychiatric Disorders in Mothers and Infants

Using a Murine Model of Psychosocial Stress in Pregnancy as a Translationally Relevant Paradigm for Psychiatric Disorders in Mothers and Infants

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Journal (Behavior)

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Methods Collections

Eye-tracking Technology and Data-mining Techniques used for a Behavioral Analysis of Adults engaged in Learning Processes

Eye-tracking Technology and Data-mining Techniques used for a Behavioral Analysis of Adults engaged in Learning Processes

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Journal (Behavior)

An Adjustable High-Definition Imaging System for Behavioral Studies of <em>Drosophila</em> Adults

An Adjustable High-Definition Imaging System for Behavioral Studies of Drosophila Adults

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Journal (Behavior)

Density Gradient Ultracentrifugation for Investigating Endocytic Recycling in Mammalian Cells

Density Gradient Ultracentrifugation for Investigating Endocytic Recycling in Mammalian Cells

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Journal (Biochemistry)

High-Pressure NMR Experiments for Detecting Protein Low-Lying Conformational States

High-Pressure NMR Experiments for Detecting Protein Low-Lying Conformational States

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Journal (Biochemistry)

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Methods Collections

Extraction and Visualization of Protein Aggregates after Treatment of <em>Escherichia coli</em> with a Proteotoxic Stressor

Extraction and Visualization of Protein Aggregates after Treatment of Escherichia coli with a Proteotoxic Stressor

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Journal (Biochemistry)

F&#246;rster Resonance Energy Transfer Measurements in Living Plant Cells

Förster Resonance Energy Transfer Measurements in Living Plant Cells

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Journal (Biochemistry)

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Methods Collections

Resin-Assisted Capture Coupled with Isobaric Tandem Mass Tag Labeling for Multiplexed Quantification of Protein Thiol Oxidation

Resin-Assisted Capture Coupled with Isobaric Tandem Mass Tag Labeling for Multiplexed Quantification of Protein Thiol Oxidation

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Journal (Biochemistry)

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Methods Collections

A Sample Preparation Pipeline for Microcrystals at the VMXm Beamline

A Sample Preparation Pipeline for Microcrystals at the VMXm Beamline

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Journal (Biochemistry)

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Methods Collections

gP2S, an Information Management System for CryoEM Experiments

gP2S, an Information Management System for CryoEM Experiments

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Journal (Biochemistry)

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Methods Collections

Profiling Volatile Compounds in Blackcurrant Fruit using Headspace Solid-Phase Microextraction Coupled to Gas Chromatography-Mass Spectrometry

Profiling Volatile Compounds in Blackcurrant Fruit using Headspace Solid-Phase Microextraction Coupled to Gas Chromatography-Mass Spectrometry

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Journal (Biochemistry)

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Methods Collections

The Automated Crystallography Pipelines at the EMBL HTX Facility in Grenoble

The Automated Crystallography Pipelines at the EMBL HTX Facility in Grenoble

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Journal (Biochemistry)

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Methods Collections

NMR-Based Fragment Screening in a Minimum Sample but Maximum Automation Mode

NMR-Based Fragment Screening in a Minimum Sample but Maximum Automation Mode

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Journal (Biochemistry)

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Methods Collections

Laser-free Hydroxyl Radical Protein Footprinting to Perform Higher Order Structural Analysis of Proteins

Laser-free Hydroxyl Radical Protein Footprinting to Perform Higher Order Structural Analysis of Proteins

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Journal (Biochemistry)

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Methods Collections

<em>In vitro</em> Monitoring of Extracellular pH in Real-Time

In vitro Monitoring of Extracellular pH in Real-Time

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Journal (Biochemistry)

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Methods Collections

Polysome Profiling without Gradient Makers or Fractionation Systems

Polysome Profiling without Gradient Makers or Fractionation Systems

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Journal (Biochemistry)

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Methods Collections

OnePot PURE Cell-Free System

OnePot PURE Cell-Free System

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Journal (Bioengineering)

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Methods Collections

Developing 3D Organized Human Cardiac Tissue within a Microfluidic Platform

Developing 3D Organized Human Cardiac Tissue within a Microfluidic Platform

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Journal (Bioengineering)

Rapid, Enzymatic Methods for Amplification of Minimal, Linear Templates for Protein Prototyping using Cell-Free Systems

Rapid, Enzymatic Methods for Amplification of Minimal, Linear Templates for Protein Prototyping using Cell-Free Systems

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Journal (Bioengineering)

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Methods Collections

Multi-timescale Microscopy Methods for the Characterization of Fluorescently-labeled Microbubbles for Ultrasound-Triggered Drug Release

Multi-timescale Microscopy Methods for the Characterization of Fluorescently-labeled Microbubbles for Ultrasound-Triggered Drug Release

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Journal (Bioengineering)

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Methods Collections

An Efficient Method for Adenovirus Production

An Efficient Method for Adenovirus Production

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Journal (Bioengineering)

An In vitro System to Gauge the Thrombolytic Efficacy of Histotripsy and a Lytic Drug

An In vitro System to Gauge the Thrombolytic Efficacy of Histotripsy and a Lytic Drug

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Journal (Bioengineering)

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Methods Collections

Segmenting Growth of Endothelial Cells in 6-Well Plates on an Orbital Shaker for Mechanobiological Studies

Segmenting Growth of Endothelial Cells in 6-Well Plates on an Orbital Shaker for Mechanobiological Studies

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Journal (Bioengineering)

Identification of Alternative Splicing and Polyadenylation in RNA-seq Data

Identification of Alternative Splicing and Polyadenylation in RNA-seq Data

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Journal (Biology)

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Methods Collections

A Bead Movement Based Computational Framework for 3-Dimensional Analysis of Biofilm Material Heterogeneity

A Bead Movement Based Computational Framework for 3-Dimensional Analysis of Biofilm Material Heterogeneity

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Journal (Biology)

Small-Scale Plasma Membrane Preparation for the Analysis of <em>Candida albicans</em> Cdr1-mGFPHis

Small-Scale Plasma Membrane Preparation for the Analysis of Candida albicans Cdr1-mGFPHis

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Journal (Biology)

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Methods Collections

Evaluation and Quantification of Micro Epithelial Gaps in the Colonic Mucosa using Immunofluorescence Staining

Evaluation and Quantification of Micro Epithelial Gaps in the Colonic Mucosa using Immunofluorescence Staining

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Journal (Biology)

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Methods Collections

Imaging the Gut with "CLARITY"

Imaging the Gut with "CLARITY"

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Journal (Biology)

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Methods Collections

Identification, Isolation, and Characterization of Fibro-Adipogenic Progenitors (FAPs) and Myogenic Progenitors (MPs) in Skeletal Muscle in the Rat

Identification, Isolation, and Characterization of Fibro-Adipogenic Progenitors (FAPs) and Myogenic Progenitors (MPs) in Skeletal Muscle in the Rat

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Journal (Biology)

<em>Xenopus laevis</em> Egg Extract Preparation and Live Imaging Methods for Visualizing Dynamic Cytoplasmic Organization

Xenopus laevis Egg Extract Preparation and Live Imaging Methods for Visualizing Dynamic Cytoplasmic Organization

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Journal (Biology)

Wide-Field, Real-Time Imaging of Local and Systemic Wound Signals in <em>Arabidopsis</em>

Wide-Field, Real-Time Imaging of Local and Systemic Wound Signals in Arabidopsis

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Journal (Biology)

Bead Loading Proteins and Nucleic Acids into Adherent Human Cells

Bead Loading Proteins and Nucleic Acids into Adherent Human Cells

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Journal (Biology)

Fluorescence Microscopy for ATP Internalization Mediated by Macropinocytosis in Human Tumor Cells and Tumor-xenografted Mice

Fluorescence Microscopy for ATP Internalization Mediated by Macropinocytosis in Human Tumor Cells and Tumor-xenografted Mice

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Journal (Cancer Research)

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Methods Collections

Evaluation of the <em>In vivo</em> Antitumor Activity of Polyanhydride IL-1&#945; Nanoparticles

Evaluation of the In vivo Antitumor Activity of Polyanhydride IL-1α Nanoparticles

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Journal (Cancer Research)

Generation of Zebrafish Larval Xenografts and Tumor Behavior Analysis

Generation of Zebrafish Larval Xenografts and Tumor Behavior Analysis

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Journal (Cancer Research)

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Methods Collections

High-Throughput <em>In Vitro</em> Assay using Patient-Derived Tumor Organoids

High-Throughput In Vitro Assay using Patient-Derived Tumor Organoids

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Journal (Cancer Research)

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Methods Collections

Tumor Transplantation for Assessing the Dynamics of Tumor-Infiltrating CD8<sup>+</sup> T Cells in Mice

Tumor Transplantation for Assessing the Dynamics of Tumor-Infiltrating CD8+ T Cells in Mice

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Journal (Cancer Research)

Applying Hyperspectral Reflectance Imaging to Investigate the Palettes and the Techniques of Painters

Applying Hyperspectral Reflectance Imaging to Investigate the Palettes and the Techniques of Painters

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Journal (Chemistry)

Covalent Labeling with Diethylpyrocarbonate for Studying Protein Higher-Order Structure by Mass Spectrometry

Covalent Labeling with Diethylpyrocarbonate for Studying Protein Higher-Order Structure by Mass Spectrometry

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Journal (Chemistry)

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Methods Collections

Synthesis of pH Dependent Pyrazole, Imidazole, and Isoindolone Dipyrrinone Fluorophores using a Claisen-Schmidt Condensation Approach

Synthesis of pH Dependent Pyrazole, Imidazole, and Isoindolone Dipyrrinone Fluorophores using a Claisen-Schmidt Condensation Approach

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Journal (Chemistry)

Capillary Electrophoresis-based Hydrogen/Deuterium Exchange for Conformational Characterization of Proteins with Top-down Mass Spectrometry

Capillary Electrophoresis-based Hydrogen/Deuterium Exchange for Conformational Characterization of Proteins with Top-down Mass Spectrometry

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Journal (Chemistry)

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Methods Collections

Fractionation of Lignocellulosic Biomass using the OrganoCat Process

Fractionation of Lignocellulosic Biomass using the OrganoCat Process

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Journal (Chemistry)

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Methods Collections

A 3-D Tail Explant Culture to Study Vertebrate Segmentation in Zebrafish

A 3-D Tail Explant Culture to Study Vertebrate Segmentation in Zebrafish

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Journal (Developmental Biology)

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Methods Collections

Defining the Program of Maternal mRNA Translation during In vitro Maturation using a Single Oocyte Reporter Assay

Defining the Program of Maternal mRNA Translation during In vitro Maturation using a Single Oocyte Reporter Assay

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Journal (Developmental Biology)

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Methods Collections

Differentiation of Porcine Induced Pluripotent Stem Cells (piPSCs) into Neural Progenitor Cells (NPCs)

Differentiation of Porcine Induced Pluripotent Stem Cells (piPSCs) into Neural Progenitor Cells (NPCs)

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Journal (Developmental Biology)

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Methods Collections

Continuous-Wave Propagation Channel-Sounding Measurement System - Testing, Verification, and Measurements

Continuous-Wave Propagation Channel-Sounding Measurement System - Testing, Verification, and Measurements

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Journal (Engineering)

Measurement of the Hand Transmitted Vibration of the Human Hand Arm System During Operation of a Hand Tractor

Measurement of the Hand Transmitted Vibration of the Human Hand Arm System During Operation of a Hand Tractor

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Journal (Engineering)

Monitoring Pedogenic Inorganic Carbon Accumulation Due to Weathering of Amended Silicate Minerals in Agricultural Soils.

Monitoring Pedogenic Inorganic Carbon Accumulation Due to Weathering of Amended Silicate Minerals in Agricultural Soils.

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Journal (Environment)

Digital-Droplet PCR to Detect Indels Mutations in Genetically Modified Anopheline Mosquito Populations

Digital-Droplet PCR to Detect Indels Mutations in Genetically Modified Anopheline Mosquito Populations

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Journal (Genetics)

Genome-wide Analysis of Histone Modifications Distribution using the Chromatin Immunoprecipitation Sequencing Method in <em>Magnaporthe oryzae</em>

Genome-wide Analysis of Histone Modifications Distribution using the Chromatin Immunoprecipitation Sequencing Method in Magnaporthe oryzae

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Journal (Genetics)

An Intestinal Gut Organ Culture System for Analyzing Host-Microbiota Interactions

An Intestinal Gut Organ Culture System for Analyzing Host-Microbiota Interactions

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Journal (Immunology and Infection)

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Methods Collections

Production of Adeno-Associated Virus Vectors in Cell Stacks for Preclinical Studies in Large Animal Models

Production of Adeno-Associated Virus Vectors in Cell Stacks for Preclinical Studies in Large Animal Models

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Journal (Immunology and Infection)

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Methods Collections

Humanized Mediator Release Assay as a Read-Out for Allergen Potency

Humanized Mediator Release Assay as a Read-Out for Allergen Potency

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Journal (Immunology and Infection)

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Methods Collections

Assessing Respiratory Immune Responses to <em>Haemophilus Influenzae</em>

Assessing Respiratory Immune Responses to Haemophilus Influenzae

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Journal (Immunology and Infection)

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Methods Collections

Longitudinal Follow-Up of Urinary Tract Infections and Their Treatment in Mice using Bioluminescence Imaging

Longitudinal Follow-Up of Urinary Tract Infections and Their Treatment in Mice using Bioluminescence Imaging

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Journal (Immunology and Infection)

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Methods Collections

Activation and Conjugation of Soluble Polysaccharides using 1-Cyano-4-Dimethylaminopyridine Tetrafluoroborate (CDAP)

Activation and Conjugation of Soluble Polysaccharides using 1-Cyano-4-Dimethylaminopyridine Tetrafluoroborate (CDAP)

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Journal (Immunology and Infection)

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Methods Collections

Analysis of SAMHD1 Restriction by Flow Cytometry in Human Myeloid U937 Cells

Analysis of SAMHD1 Restriction by Flow Cytometry in Human Myeloid U937 Cells

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Journal (Immunology and Infection)

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Methods Collections

Partial Heterotopic Hindlimb Transplantation Model in Rats

Partial Heterotopic Hindlimb Transplantation Model in Rats

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Journal (Immunology and Infection)

Detection of SARS-CoV-2 Neutralizing Antibodies using High-Throughput Fluorescent Imaging of Pseudovirus Infection

Detection of SARS-CoV-2 Neutralizing Antibodies using High-Throughput Fluorescent Imaging of Pseudovirus Infection

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Journal (Immunology and Infection)

Investigating Target Gene Function in a CD40 Agonistic Antibody-induced Colitis Model using CRISPR/Cas9-based Technologies

Investigating Target Gene Function in a CD40 Agonistic Antibody-induced Colitis Model using CRISPR/Cas9-based Technologies

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Journal (Immunology and Infection)

A Fluorescence Assay for Evaluating the Permeability of a Cardiac Microvascular Endothelial Barrier in a Rat Model of Ischemia/reperfusion

A Fluorescence Assay for Evaluating the Permeability of a Cardiac Microvascular Endothelial Barrier in a Rat Model of Ischemia/reperfusion

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Journal (Medicine)

Three-Dimensional Collagen Matrix Scaffold Implantation as a Liver Regeneration Strategy

Three-Dimensional Collagen Matrix Scaffold Implantation as a Liver Regeneration Strategy

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Journal (Medicine)

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Methods Collections

A Standardized Murine Model of Extracorporeal Shockwave Therapy Induced Soft Tissue Regeneration

A Standardized Murine Model of Extracorporeal Shockwave Therapy Induced Soft Tissue Regeneration

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Journal (Medicine)

Sodium Taurocholate Induced Severe Acute Pancreatitis in C57BL/6 Mice

Sodium Taurocholate Induced Severe Acute Pancreatitis in C57BL/6 Mice

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Journal (Medicine)

Organotypic Slice Cultures as Preclinical Models of Tumor Microenvironment in Primary Pancreatic Cancer and Metastasis

Organotypic Slice Cultures as Preclinical Models of Tumor Microenvironment in Primary Pancreatic Cancer and Metastasis

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Journal (Medicine)

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Methods Collections

Retinal Pigment Epithelium Transplantation in a Non-human Primate Model for Degenerative Retinal Diseases

Retinal Pigment Epithelium Transplantation in a Non-human Primate Model for Degenerative Retinal Diseases

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Journal (Medicine)

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Methods Collections

Utilizing Percutaneous Ventricular Assist Devices in Acute Myocardial Infarction Complicated by Cardiogenic Shock

Utilizing Percutaneous Ventricular Assist Devices in Acute Myocardial Infarction Complicated by Cardiogenic Shock

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Journal (Medicine)

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Methods Collections

A New Model of Heart Failure Post-Myocardial Infarction in the Rat

A New Model of Heart Failure Post-Myocardial Infarction in the Rat

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Journal (Medicine)

Functional Characterization of Endogenously Expressed Human RYR1 Variants

Functional Characterization of Endogenously Expressed Human RYR1 Variants

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Journal (Medicine)

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Methods Collections

Characterization of a Novel Human Organotypic Retinal Culture Technique

Characterization of a Novel Human Organotypic Retinal Culture Technique

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Journal (Medicine)

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Methods Collections

Self-Administration of Drugs in Mouse Models of Feeding and Obesity

Self-Administration of Drugs in Mouse Models of Feeding and Obesity

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Journal (Medicine)

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Methods Collections

An <em>In Vivo</em> Mouse Model of Total Intravenous Anesthesia During Cancer Resection Surgery

An In Vivo Mouse Model of Total Intravenous Anesthesia During Cancer Resection Surgery

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Journal (Medicine)

The Use of 3D Echocardiography in Surgical Planning of the Mitral Valve in Pediatric Cardiology

The Use of 3D Echocardiography in Surgical Planning of the Mitral Valve in Pediatric Cardiology

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Journal (Medicine)

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Methods Collections

Blood Circuit Reconstruction in an Abdominal Mouse Heart Transplantation Model

Blood Circuit Reconstruction in an Abdominal Mouse Heart Transplantation Model

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Journal (Medicine)

Targeting the Corticospinal Tract in Neonatal Rats with a Double-Viral Vector using Combined Brain and Spine Surgery

Targeting the Corticospinal Tract in Neonatal Rats with a Double-Viral Vector using Combined Brain and Spine Surgery

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Journal (Neuroscience)

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Methods Collections

A Neuronal Apoptosis Model induced by Spinal Cord Compression in Rat

A Neuronal Apoptosis Model induced by Spinal Cord Compression in Rat

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Journal (Neuroscience)

Maximum Isometric Tetanic Force Measurement of the Tibialis Anterior Muscle in the Rat

Maximum Isometric Tetanic Force Measurement of the Tibialis Anterior Muscle in the Rat

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Journal (Neuroscience)

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Methods Collections

Combining Multiplex Fluorescence <em>In Situ</em> Hybridization with Fluorescent Immunohistochemistry on Fresh Frozen or Fixed Mouse Brain Sections

Combining Multiplex Fluorescence In Situ Hybridization with Fluorescent Immunohistochemistry on Fresh Frozen or Fixed Mouse Brain Sections

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Journal (Neuroscience)

Implantation of a Cranial Window for Repeated <em>In Vivo</em> Imaging in Awake Mice

Implantation of a Cranial Window for Repeated In Vivo Imaging in Awake Mice

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Journal (Neuroscience)

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Methods Collections

Generation of Human Brain Organoids for Mitochondrial Disease Modeling

Generation of Human Brain Organoids for Mitochondrial Disease Modeling

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Journal (Neuroscience)

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Methods Collections

Pre-Chiasmatic, Single Injection of Autologous Blood to Induce Experimental Subarachnoid Hemorrhage in a Rat Model

Pre-Chiasmatic, Single Injection of Autologous Blood to Induce Experimental Subarachnoid Hemorrhage in a Rat Model

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Journal (Neuroscience)

<em>In vivo</em> Calcium Imaging in Mouse Inferior Olive

In vivo Calcium Imaging in Mouse Inferior Olive

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Journal (Neuroscience)

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Methods Collections

In vitro Modeling for Neurological Diseases using Direct Conversion from Fibroblasts to Neuronal Progenitor Cells and Differentiation into Astrocytes

In vitro Modeling for Neurological Diseases using Direct Conversion from Fibroblasts to Neuronal Progenitor Cells and Differentiation into Astrocytes

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Journal (Neuroscience)

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Methods Collections

Direct Cannula Implantation in the Cisterna Magna of Pigs

Direct Cannula Implantation in the Cisterna Magna of Pigs

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Journal (Neuroscience)

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Methods Collections

Utilizing <em>In Vivo</em> Postnatal Electroporation to Study Cerebellar Granule Neuron Morphology and Synapse Development

Utilizing In Vivo Postnatal Electroporation to Study Cerebellar Granule Neuron Morphology and Synapse Development

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Journal (Neuroscience)

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Methods Collections

Heterologous Expression and Functional Analysis of <em>Aedes aegypti</em> Odorant Receptors to Human Odors in <em>Xenopus</em> Oocytes

Heterologous Expression and Functional Analysis of Aedes aegypti Odorant Receptors to Human Odors in Xenopus Oocytes

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Journal (Neuroscience)

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Methods Collections

Using Baseplating and a Miniscope Preanchored with an Objective Lens for Calcium Transient Research in Mice

Using Baseplating and a Miniscope Preanchored with an Objective Lens for Calcium Transient Research in Mice

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Journal (Neuroscience)

A Fibrin-Enriched and tPA-Sensitive Photothrombotic Stroke Model

A Fibrin-Enriched and tPA-Sensitive Photothrombotic Stroke Model

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Journal (Neuroscience)

A Time-Efficient Fluorescence Spectroscopy-Based Assay for Evaluating Actin Polymerization Status in Rodent and Human Brain Tissues

A Time-Efficient Fluorescence Spectroscopy-Based Assay for Evaluating Actin Polymerization Status in Rodent and Human Brain Tissues

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Journal (Neuroscience)

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Methods Collections

Analysis of Cerebral Vasospasm in a Murine Model of Subarachnoid Hemorrhage with High Frequency Transcranial Duplex Ultrasound

Analysis of Cerebral Vasospasm in a Murine Model of Subarachnoid Hemorrhage with High Frequency Transcranial Duplex Ultrasound

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Journal (Neuroscience)

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